RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
EFCAB2-216ENST00000551317 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
EFCAB2-216ENST00000551317 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
EFCAB2-216ENST00000551317 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
EFCAB2-216ENST00000551317 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
EFCAB2-216ENST00000551317 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
EFCAB2-216ENST00000551317 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
EFCAB2-216ENST00000551317 ABCC9O60706 1549 aa14.81□□□□□ -0.04
EFCAB2-216ENST00000551317 NACADO15069 1562 aa14.72□□□□□ -0.05
EFCAB2-216ENST00000551317 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
EFCAB2-216ENST00000551317 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
EFCAB2-216ENST00000551317 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
EFCAB2-216ENST00000551317 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
EFCAB2-216ENST00000551317 UNC13AQ9UPW8 1703 aa14.37□□□□□ -0.11
EFCAB2-216ENST00000551317 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
EFCAB2-216ENST00000551317 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
EFCAB2-216ENST00000551317 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
EFCAB2-216ENST00000551317 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
EFCAB2-216ENST00000551317 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
EFCAB2-216ENST00000551317 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
EFCAB2-216ENST00000551317 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
EFCAB2-216ENST00000551317 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
EFCAB2-216ENST00000551317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
EFCAB2-216ENST00000551317 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
EFCAB2-216ENST00000551317 WIZO95785 1651 aa13.72□□□□□ -0.21
EFCAB2-216ENST00000551317 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.21
EFCAB2-216ENST00000551317 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
EFCAB2-216ENST00000551317 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
EFCAB2-216ENST00000551317 TOP2AP11388 1531 aaKnown RBP13.65□□□□□ -0.22
EFCAB2-216ENST00000551317 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
EFCAB2-216ENST00000551317 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
EFCAB2-216ENST00000551317 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.25
EFCAB2-216ENST00000551317 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
EFCAB2-216ENST00000551317 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
EFCAB2-216ENST00000551317 FOXD1Q16676 465 aa13.47□□□□□ -0.25
EFCAB2-216ENST00000551317 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
EFCAB2-216ENST00000551317 CCDC88BA6NC98 1476 aa13.39□□□□□ -0.27
EFCAB2-216ENST00000551317 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
EFCAB2-216ENST00000551317 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
EFCAB2-216ENST00000551317 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
EFCAB2-216ENST00000551317 CFTRP13569 1480 aa13.18□□□□□ -0.3
EFCAB2-216ENST00000551317 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
EFCAB2-216ENST00000551317 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
EFCAB2-216ENST00000551317 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
EFCAB2-216ENST00000551317 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
EFCAB2-216ENST00000551317 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
EFCAB2-216ENST00000551317 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
EFCAB2-216ENST00000551317 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
EFCAB2-216ENST00000551317 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
EFCAB2-216ENST00000551317 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
EFCAB2-216ENST00000551317 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
EFCAB2-216ENST00000551317 NESP48681 1621 aa12.98□□□□□ -0.33
EFCAB2-216ENST00000551317 CUX1P39880 1505 aa12.95□□□□□ -0.34
EFCAB2-216ENST00000551317 CEP164Q9UPV0 1460 aa12.95□□□□□ -0.34
EFCAB2-216ENST00000551317 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
EFCAB2-216ENST00000551317 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
EFCAB2-216ENST00000551317 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
EFCAB2-216ENST00000551317 MSH5O43196 834 aa12.88□□□□□ -0.35
EFCAB2-216ENST00000551317 EEA1Q15075 1411 aa12.87□□□□□ -0.35
EFCAB2-216ENST00000551317 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
EFCAB2-216ENST00000551317 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
EFCAB2-216ENST00000551317 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.35
EFCAB2-216ENST00000551317 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
EFCAB2-216ENST00000551317 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
EFCAB2-216ENST00000551317 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
EFCAB2-216ENST00000551317 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
EFCAB2-216ENST00000551317 WDR62O43379 1518 aa12.81□□□□□ -0.36
EFCAB2-216ENST00000551317 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
EFCAB2-216ENST00000551317 KIF21BO75037 1637 aa12.75□□□□□ -0.37
EFCAB2-216ENST00000551317 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
EFCAB2-216ENST00000551317 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
EFCAB2-216ENST00000551317 SOGA1O94964 1423 aa12.74□□□□□ -0.37
EFCAB2-216ENST00000551317 TARBP1Q13395 1621 aaKnown RBP12.73□□□□□ -0.37
EFCAB2-216ENST00000551317 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
EFCAB2-216ENST00000551317 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
EFCAB2-216ENST00000551317 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
EFCAB2-216ENST00000551317 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
EFCAB2-216ENST00000551317 CUL7Q14999 1698 aa12.67□□□□□ -0.38
EFCAB2-216ENST00000551317 CUX2O14529 1486 aa12.67□□□□□ -0.38
EFCAB2-216ENST00000551317 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
EFCAB2-216ENST00000551317 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
EFCAB2-216ENST00000551317 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
EFCAB2-216ENST00000551317 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
EFCAB2-216ENST00000551317 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
EFCAB2-216ENST00000551317 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
EFCAB2-216ENST00000551317 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
EFCAB2-216ENST00000551317 KCNA4P22459 653 aa12.58□□□□□ -0.4
EFCAB2-216ENST00000551317 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
EFCAB2-216ENST00000551317 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
EFCAB2-216ENST00000551317 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
EFCAB2-216ENST00000551317 ADAMTS12P58397 1594 aa12.55□□□□□ -0.4
EFCAB2-216ENST00000551317 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
EFCAB2-216ENST00000551317 IGF1RP08069 1367 aa12.53□□□□□ -0.4
EFCAB2-216ENST00000551317 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
EFCAB2-216ENST00000551317 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
EFCAB2-216ENST00000551317 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
EFCAB2-216ENST00000551317 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
EFCAB2-216ENST00000551317 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
EFCAB2-216ENST00000551317 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
EFCAB2-216ENST00000551317 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms