RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
CALCOCO1-218ENST00000550804 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.991e-6■■■■■ 33.7
CALCOCO1-218ENST00000550804 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
CALCOCO1-218ENST00000550804 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
CALCOCO1-218ENST00000550804 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
CALCOCO1-218ENST00000550804 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
CALCOCO1-218ENST00000550804 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
CALCOCO1-218ENST00000550804 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
CALCOCO1-218ENST00000550804 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
CALCOCO1-218ENST00000550804 ITGAEP38570 1179 aa21.11■□□□□ 0.97
CALCOCO1-218ENST00000550804 CTTNBP2Q8WZ74 1663 aa21.1■□□□□ 0.97
CALCOCO1-218ENST00000550804 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
CALCOCO1-218ENST00000550804 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.96
CALCOCO1-218ENST00000550804 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
CALCOCO1-218ENST00000550804 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
CALCOCO1-218ENST00000550804 EFCAB5A4FU69 1503 aa21.03■□□□□ 0.96
CALCOCO1-218ENST00000550804 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
CALCOCO1-218ENST00000550804 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.95
CALCOCO1-218ENST00000550804 RRBP1Q9P2E9 1410 aaKnown RBP21.01■□□□□ 0.95
CALCOCO1-218ENST00000550804 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
CALCOCO1-218ENST00000550804 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
CALCOCO1-218ENST00000550804 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
CALCOCO1-218ENST00000550804 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
CALCOCO1-218ENST00000550804 SAMD9Q5K651 1589 aa20.94■□□□□ 0.94
CALCOCO1-218ENST00000550804 MAP3K1Q13233 1512 aa20.92■□□□□ 0.94
CALCOCO1-218ENST00000550804 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
CALCOCO1-218ENST00000550804 ACIN1Q9UKV3 1341 aaKnown RBP20.9■□□□□ 0.94
CALCOCO1-218ENST00000550804 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
CALCOCO1-218ENST00000550804 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
CALCOCO1-218ENST00000550804 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
CALCOCO1-218ENST00000550804 MIER1Q8N108 512 aa20.89■□□□□ 0.93
CALCOCO1-218ENST00000550804 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
CALCOCO1-218ENST00000550804 FMN1Q68DA7 1419 aa20.89■□□□□ 0.93
CALCOCO1-218ENST00000550804 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.93
CALCOCO1-218ENST00000550804 IQGAP2Q13576 1575 aa20.88■□□□□ 0.93
CALCOCO1-218ENST00000550804 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
CALCOCO1-218ENST00000550804 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
CALCOCO1-218ENST00000550804 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
CALCOCO1-218ENST00000550804 FYCO1Q9BQS8 1478 aa20.86■□□□□ 0.93
CALCOCO1-218ENST00000550804 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
CALCOCO1-218ENST00000550804 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
CALCOCO1-218ENST00000550804 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.93
CALCOCO1-218ENST00000550804 KIAA0586Q9BVV6 1533 aa20.83■□□□□ 0.93
CALCOCO1-218ENST00000550804 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
CALCOCO1-218ENST00000550804 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
CALCOCO1-218ENST00000550804 FBLN2P98095 1184 aa20.8■□□□□ 0.92
CALCOCO1-218ENST00000550804 UGGT2Q9NYU1 1516 aa20.79■□□□□ 0.92
CALCOCO1-218ENST00000550804 CFAP43Q8NDM7 1665 aa20.79■□□□□ 0.92
CALCOCO1-218ENST00000550804 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
CALCOCO1-218ENST00000550804 CENPBP07199 599 aaPredicted RBP20.74■□□□□ 0.91
CALCOCO1-218ENST00000550804 DISP1Q96F81 1524 aa20.72■□□□□ 0.91
CALCOCO1-218ENST00000550804 NUP160Q12769 1436 aa20.71■□□□□ 0.91
CALCOCO1-218ENST00000550804 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
CALCOCO1-218ENST00000550804 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
CALCOCO1-218ENST00000550804 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
CALCOCO1-218ENST00000550804 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
CALCOCO1-218ENST00000550804 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
CALCOCO1-218ENST00000550804 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
CALCOCO1-218ENST00000550804 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
CALCOCO1-218ENST00000550804 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
CALCOCO1-218ENST00000550804 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
CALCOCO1-218ENST00000550804 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
CALCOCO1-218ENST00000550804 EPRSP07814 1512 aaKnown RBP20.58■□□□□ 0.89
CALCOCO1-218ENST00000550804 ARID3CA6NKF2 412 aa20.58■□□□□ 0.88
CALCOCO1-218ENST00000550804 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
CALCOCO1-218ENST00000550804 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
CALCOCO1-218ENST00000550804 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
CALCOCO1-218ENST00000550804 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
CALCOCO1-218ENST00000550804 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
CALCOCO1-218ENST00000550804 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
CALCOCO1-218ENST00000550804 PTPRKQ15262 1439 aa20.52■□□□□ 0.88
CALCOCO1-218ENST00000550804 CHD1O14646 1710 aa20.51■□□□□ 0.87
CALCOCO1-218ENST00000550804 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
CALCOCO1-218ENST00000550804 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
CALCOCO1-218ENST00000550804 SUPT6HQ7KZ85 1726 aaKnown RBP20.49■□□□□ 0.87
CALCOCO1-218ENST00000550804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.49■□□□□ 0.87
CALCOCO1-218ENST00000550804 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
CALCOCO1-218ENST00000550804 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
CALCOCO1-218ENST00000550804 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
CALCOCO1-218ENST00000550804 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
CALCOCO1-218ENST00000550804 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
CALCOCO1-218ENST00000550804 CHIC2Q9UKJ5 165 aa20.44■□□□□ 0.86
CALCOCO1-218ENST00000550804 RRP7BPQ9NSQ0 103 aa20.4■□□□□ 0.86
CALCOCO1-218ENST00000550804 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
CALCOCO1-218ENST00000550804 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
CALCOCO1-218ENST00000550804 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
CALCOCO1-218ENST00000550804 ABCA8O94911 1581 aa20.37■□□□□ 0.85
CALCOCO1-218ENST00000550804 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
CALCOCO1-218ENST00000550804 PTPRGP23470 1445 aa20.35■□□□□ 0.85
CALCOCO1-218ENST00000550804 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
CALCOCO1-218ENST00000550804 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
CALCOCO1-218ENST00000550804 NAIPQ13075 1403 aa20.34■□□□□ 0.85
CALCOCO1-218ENST00000550804 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
CALCOCO1-218ENST00000550804 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
CALCOCO1-218ENST00000550804 TROQ12816 1431 aaPredicted RBP20.31■□□□□ 0.84
CALCOCO1-218ENST00000550804 MIA2Q96PC5 1412 aa20.31■□□□□ 0.84
CALCOCO1-218ENST00000550804 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
CALCOCO1-218ENST00000550804 ATP10BO94823 1461 aa20.3■□□□□ 0.84
CALCOCO1-218ENST00000550804 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
CALCOCO1-218ENST00000550804 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms