RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 CTTNBP2Q8WZ74 1663 aa38.48■■■■□ 3.75
TGFBR1-207ENST00000549766 PCGF6Q9BYE7 350 aa38.48■■■■□ 3.75
TGFBR1-207ENST00000549766 SNAPC4Q5SXM2 1469 aa38.37■■■■□ 3.73
TGFBR1-207ENST00000549766 MAGI1Q96QZ7 1491 aaPredicted RBP38.33■■■■□ 3.73
TGFBR1-207ENST00000549766 PPARGC1BQ86YN6 1023 aaKnown RBP38.31■■■■□ 3.72
TGFBR1-207ENST00000549766 EFCAB5A4FU69 1503 aa38.31■■■■□ 3.72
TGFBR1-207ENST00000549766 GRIN2AQ12879 1464 aa38.19■■■■□ 3.7
TGFBR1-207ENST00000549766 SYNJ2O15056 1496 aa38.18■■■■□ 3.7
TGFBR1-207ENST00000549766 SAMD9Q5K651 1589 aa38.16■■■■□ 3.7
TGFBR1-207ENST00000549766 IQGAP2Q13576 1575 aa38.11■■■■□ 3.69
TGFBR1-207ENST00000549766 APLP2Q06481 763 aa38.1■■■■□ 3.69
TGFBR1-207ENST00000549766 FHOD3Q2V2M9 1422 aa38.09■■■■□ 3.69
TGFBR1-207ENST00000549766 KIAA0586Q9BVV6 1533 aa38.05■■■■□ 3.68
TGFBR1-207ENST00000549766 P3H3Q8IVL6 736 aa38.03■■■■□ 3.68
TGFBR1-207ENST00000549766 CHMP7Q8WUX9 453 aaPredicted RBP38.01■■■■□ 3.68
TGFBR1-207ENST00000549766 UGGT2Q9NYU1 1516 aa37.98■■■■□ 3.67
TGFBR1-207ENST00000549766 MAP3K1Q13233 1512 aa37.96■■■■□ 3.67
TGFBR1-207ENST00000549766 TTBK1Q5TCY1 1321 aaPredicted RBP37.95■■■■□ 3.67
TGFBR1-207ENST00000549766 NUP160Q12769 1436 aa37.95■■■■□ 3.67
TGFBR1-207ENST00000549766 FMN1Q68DA7 1419 aa37.95■■■■□ 3.67
TGFBR1-207ENST00000549766 CEP170Q5SW79 1584 aa37.95■■■■□ 3.67
TGFBR1-207ENST00000549766 PCF11O94913 1555 aaKnown RBP37.93■■■■□ 3.66
TGFBR1-207ENST00000549766 CASKIN1Q8WXD9 1431 aa37.9■■■■□ 3.66
TGFBR1-207ENST00000549766 FYCO1Q9BQS8 1478 aa37.89■■■■□ 3.66
TGFBR1-207ENST00000549766 TIAM1Q13009 1591 aa37.85■■■■□ 3.65
TGFBR1-207ENST00000549766 KANK4Q5T7N3 995 aaPredicted RBP37.85■■■■□ 3.65
TGFBR1-207ENST00000549766 FBLN2P98095 1184 aa37.84■■■■□ 3.65
TGFBR1-207ENST00000549766 DISP1Q96F81 1524 aa37.78■■■■□ 3.64
TGFBR1-207ENST00000549766 CFAP43Q8NDM7 1665 aa37.75■■■■□ 3.63
TGFBR1-207ENST00000549766 KIAA0556O60303 1618 aa37.74■■■■□ 3.63
TGFBR1-207ENST00000549766 LRRC9Q6ZRR7 1453 aa37.68■■■■□ 3.62
TGFBR1-207ENST00000549766 CHD1O14646 1710 aa37.67■■■■□ 3.62
TGFBR1-207ENST00000549766 JPH4Q96JJ6 628 aa37.61■■■■□ 3.61
TGFBR1-207ENST00000549766 ATP1B4Q9UN42 357 aaPredicted RBP37.58■■■■□ 3.61
TGFBR1-207ENST00000549766 LRRIQ1Q96JM4 1722 aa37.56■■■■□ 3.6
TGFBR1-207ENST00000549766 CARMIL2Q6F5E8 1435 aa37.53■■■■□ 3.6
TGFBR1-207ENST00000549766 HECW1Q76N89 1606 aa37.52■■■■□ 3.6
TGFBR1-207ENST00000549766 HRCP23327 699 aa37.51■■■■□ 3.6
TGFBR1-207ENST00000549766 RRBP1Q9P2E9 1410 aaKnown RBP37.5■■■■□ 3.59
TGFBR1-207ENST00000549766 CCDC18Q5T9S5 1454 aa37.48■■■■□ 3.59
TGFBR1-207ENST00000549766 EPRSP07814 1512 aaKnown RBP37.4■■■■□ 3.58
TGFBR1-207ENST00000549766 SHROOM2Q13796 1616 aa37.4■■■■□ 3.58
TGFBR1-207ENST00000549766 RAPGEF6Q8TEU7 1601 aa37.37■■■■□ 3.57
TGFBR1-207ENST00000549766 PRG4Q92954 1404 aaPredicted RBP37.35■■■■□ 3.57
TGFBR1-207ENST00000549766 PHLDB1Q86UU1 1377 aa37.35■■■■□ 3.57
TGFBR1-207ENST00000549766 MTUS2Q5JR59 1369 aa37.33■■■■□ 3.57
TGFBR1-207ENST00000549766 CCNB3Q8WWL7 1395 aa37.32■■■■□ 3.57
TGFBR1-207ENST00000549766 NUP153P49790 1475 aaKnown RBP37.32■■■■□ 3.56
TGFBR1-207ENST00000549766 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.56
TGFBR1-207ENST00000549766 EHBP1L1Q8N3D4 1523 aa37.32■■■■□ 3.56
TGFBR1-207ENST00000549766 MAGI3Q5TCQ9 1506 aa37.28■■■■□ 3.56
TGFBR1-207ENST00000549766 CDK13Q14004 1512 aaKnown RBP37.27■■■■□ 3.56
TGFBR1-207ENST00000549766 PLB1Q6P1J6 1458 aa37.25■■■■□ 3.55
TGFBR1-207ENST00000549766 ABCA8O94911 1581 aa37.21■■■■□ 3.55
TGFBR1-207ENST00000549766 HNRNPUL2Q1KMD3 747 aaKnown RBP37.21■■■■□ 3.55
TGFBR1-207ENST00000549766 ARHGEF11O15085 1522 aa37.19■■■■□ 3.54
TGFBR1-207ENST00000549766 SUPT6HQ7KZ85 1726 aaKnown RBP37.18■■■■□ 3.54
TGFBR1-207ENST00000549766 NCOA2Q15596 1464 aa37.18■■■■□ 3.54
TGFBR1-207ENST00000549766 PTPRGP23470 1445 aa37.14■■■■□ 3.54
TGFBR1-207ENST00000549766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.1■■■■□ 3.533e-9■■■□□ 18.3
TGFBR1-207ENST00000549766 ERCC6L2Q5T890 1561 aa37.08■■■■□ 3.53
TGFBR1-207ENST00000549766 FGD6Q6ZV73 1430 aa37.06■■■■□ 3.52
TGFBR1-207ENST00000549766 ARID3CA6NKF2 412 aa37.06■■■■□ 3.52
TGFBR1-207ENST00000549766 MYOM3Q5VTT5 1437 aa37.05■■■■□ 3.52
TGFBR1-207ENST00000549766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.04■■■■□ 3.52
TGFBR1-207ENST00000549766 CDK11AQ9UQ88 783 aaPredicted RBP37.02■■■■□ 3.52
TGFBR1-207ENST00000549766 ZEB1P37275 1124 aaPredicted RBP37.01■■■■□ 3.52
TGFBR1-207ENST00000549766 ATP10BO94823 1461 aa36.97■■■■□ 3.51
TGFBR1-207ENST00000549766 TROQ12816 1431 aaPredicted RBP36.95■■■■□ 3.51
TGFBR1-207ENST00000549766 UACAQ9BZF9 1416 aa36.95■■■■□ 3.51
TGFBR1-207ENST00000549766 FAM50AQ14320 339 aaKnown RBP36.92■■■■□ 3.5
TGFBR1-207ENST00000549766 CCER1Q8TC90 406 aaPredicted RBP36.91■■■■□ 3.5
TGFBR1-207ENST00000549766 ADCY10Q96PN6 1610 aa36.87■■■■□ 3.49
TGFBR1-207ENST00000549766 MIA2Q96PC5 1412 aa36.87■■■■□ 3.49
TGFBR1-207ENST00000549766 TCOF1Q13428 1488 aaKnown RBP36.85■■■■□ 3.49
TGFBR1-207ENST00000549766 OSCARQ8IYS5 282 aa36.84■■■■□ 3.49
TGFBR1-207ENST00000549766 ABCC2Q92887 1545 aa36.84■■■■□ 3.49
TGFBR1-207ENST00000549766 PTPN23Q9H3S7 1636 aa36.84■■■■□ 3.49
TGFBR1-207ENST00000549766 ITGAEP38570 1179 aa36.83■■■■□ 3.49
TGFBR1-207ENST00000549766 UHRF1BP1LA0JNW5 1464 aa36.77■■■■□ 3.48
TGFBR1-207ENST00000549766 PLEKHD1A6NEE1 506 aa36.77■■■■□ 3.48
TGFBR1-207ENST00000549766 KIF14Q15058 1648 aa36.75■■■■□ 3.47
TGFBR1-207ENST00000549766 PTPRKQ15262 1439 aa36.68■■■■□ 3.46
TGFBR1-207ENST00000549766 SETD5Q9C0A6 1442 aa36.67■■■■□ 3.46
TGFBR1-207ENST00000549766 ABCC10Q5T3U5 1492 aa36.66■■■■□ 3.46
TGFBR1-207ENST00000549766 GPATCH8Q9UKJ3 1502 aaKnown RBP36.66■■■■□ 3.46
TGFBR1-207ENST00000549766 ITSN2Q9NZM3 1697 aa36.64■■■■□ 3.46
TGFBR1-207ENST00000549766 KDM5BQ9UGL1 1544 aa36.63■■■■□ 3.45
TGFBR1-207ENST00000549766 RAB3GAP2Q9H2M9 1393 aa36.63■■■■□ 3.45
TGFBR1-207ENST00000549766 DHX57Q6P158 1386 aaKnown RBP36.58■■■■□ 3.45
TGFBR1-207ENST00000549766 ZCCHC11Q5TAX3 1644 aaKnown RBP36.55■■■■□ 3.44
TGFBR1-207ENST00000549766 HFM1A2PYH4 1435 aa36.53■■■■□ 3.44
TGFBR1-207ENST00000549766 CDC42BPAQ5VT25 1732 aa36.51■■■■□ 3.44
TGFBR1-207ENST00000549766 CFDP1Q9UEE9 299 aaPredicted RBP36.5■■■■□ 3.43
TGFBR1-207ENST00000549766 CLSPNQ9HAW4 1339 aa36.49■■■■□ 3.43
TGFBR1-207ENST00000549766 ZNF644Q9H582 1327 aaPredicted RBP36.47■■■■□ 3.43
TGFBR1-207ENST00000549766 DNMT1P26358 1616 aaKnown RBP36.47■■■■□ 3.43
TGFBR1-207ENST00000549766 CAMSAP2Q08AD1 1489 aa36.47■■■■□ 3.43
TGFBR1-207ENST00000549766 AKNAQ7Z591 1439 aa36.46■■■■□ 3.43
TGFBR1-207ENST00000549766 DAPK1P53355 1430 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms