RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
CALCOCO1-214ENST00000549613 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
CALCOCO1-214ENST00000549613 CTTNBP2Q8WZ74 1663 aa21.55■■□□□ 1.04
CALCOCO1-214ENST00000549613 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
CALCOCO1-214ENST00000549613 FBLN2P98095 1184 aa21.47■■□□□ 1.03
CALCOCO1-214ENST00000549613 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
CALCOCO1-214ENST00000549613 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
CALCOCO1-214ENST00000549613 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
CALCOCO1-214ENST00000549613 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
CALCOCO1-214ENST00000549613 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
CALCOCO1-214ENST00000549613 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
CALCOCO1-214ENST00000549613 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
CALCOCO1-214ENST00000549613 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
CALCOCO1-214ENST00000549613 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
CALCOCO1-214ENST00000549613 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
CALCOCO1-214ENST00000549613 NUP160Q12769 1436 aa21.38■■□□□ 1.01
CALCOCO1-214ENST00000549613 APLP2Q06481 763 aa21.37■■□□□ 1.01
CALCOCO1-214ENST00000549613 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
CALCOCO1-214ENST00000549613 SAMD9Q5K651 1589 aa21.32■■□□□ 1
CALCOCO1-214ENST00000549613 CEP170Q5SW79 1584 aa21.32■■□□□ 1
CALCOCO1-214ENST00000549613 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
CALCOCO1-214ENST00000549613 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
CALCOCO1-214ENST00000549613 ARHGEF11O15085 1522 aa21.29■■□□□ 1
CALCOCO1-214ENST00000549613 CHD1O14646 1710 aa21.28■■□□□ 1
CALCOCO1-214ENST00000549613 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
CALCOCO1-214ENST00000549613 FMN1Q68DA7 1419 aa21.28■■□□□ 1
CALCOCO1-214ENST00000549613 JPH4Q96JJ6 628 aa21.26■□□□□ 0.99
CALCOCO1-214ENST00000549613 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
CALCOCO1-214ENST00000549613 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
CALCOCO1-214ENST00000549613 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
CALCOCO1-214ENST00000549613 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
CALCOCO1-214ENST00000549613 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
CALCOCO1-214ENST00000549613 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
CALCOCO1-214ENST00000549613 KIAA0556O60303 1618 aa21.17■□□□□ 0.98
CALCOCO1-214ENST00000549613 FYCO1Q9BQS8 1478 aa21.16■□□□□ 0.98
CALCOCO1-214ENST00000549613 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
CALCOCO1-214ENST00000549613 PCF11O94913 1555 aaKnown RBP21.12■□□□□ 0.97
CALCOCO1-214ENST00000549613 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
CALCOCO1-214ENST00000549613 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
CALCOCO1-214ENST00000549613 TIAM1Q13009 1591 aa21.07■□□□□ 0.96
CALCOCO1-214ENST00000549613 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
CALCOCO1-214ENST00000549613 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
CALCOCO1-214ENST00000549613 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
CALCOCO1-214ENST00000549613 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
CALCOCO1-214ENST00000549613 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
CALCOCO1-214ENST00000549613 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
CALCOCO1-214ENST00000549613 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
CALCOCO1-214ENST00000549613 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
CALCOCO1-214ENST00000549613 PTPRGP23470 1445 aa20.98■□□□□ 0.95
CALCOCO1-214ENST00000549613 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
CALCOCO1-214ENST00000549613 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
CALCOCO1-214ENST00000549613 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
CALCOCO1-214ENST00000549613 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
CALCOCO1-214ENST00000549613 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
CALCOCO1-214ENST00000549613 ABCA8O94911 1581 aa20.89■□□□□ 0.94
CALCOCO1-214ENST00000549613 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.94
CALCOCO1-214ENST00000549613 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.94
CALCOCO1-214ENST00000549613 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
CALCOCO1-214ENST00000549613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
CALCOCO1-214ENST00000549613 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
CALCOCO1-214ENST00000549613 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
CALCOCO1-214ENST00000549613 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
CALCOCO1-214ENST00000549613 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
CALCOCO1-214ENST00000549613 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.92
CALCOCO1-214ENST00000549613 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
CALCOCO1-214ENST00000549613 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
CALCOCO1-214ENST00000549613 SUPT6HQ7KZ85 1726 aaKnown RBP20.78■□□□□ 0.92
CALCOCO1-214ENST00000549613 ATP10BO94823 1461 aa20.77■□□□□ 0.92
CALCOCO1-214ENST00000549613 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
CALCOCO1-214ENST00000549613 CCNB3Q8WWL7 1395 aa20.76■□□□□ 0.91
CALCOCO1-214ENST00000549613 UHRF1BP1LA0JNW5 1464 aa20.75■□□□□ 0.91
CALCOCO1-214ENST00000549613 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
CALCOCO1-214ENST00000549613 PHLDB1Q86UU1 1377 aa20.75■□□□□ 0.91
CALCOCO1-214ENST00000549613 MAGI3Q5TCQ9 1506 aa20.75■□□□□ 0.91
CALCOCO1-214ENST00000549613 ABCC2Q92887 1545 aa20.75■□□□□ 0.91
CALCOCO1-214ENST00000549613 TROQ12816 1431 aaPredicted RBP20.74■□□□□ 0.91
CALCOCO1-214ENST00000549613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.69■□□□□ 0.9
CALCOCO1-214ENST00000549613 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
CALCOCO1-214ENST00000549613 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
CALCOCO1-214ENST00000549613 KDM5BQ9UGL1 1544 aa20.64■□□□□ 0.9
CALCOCO1-214ENST00000549613 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
CALCOCO1-214ENST00000549613 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
CALCOCO1-214ENST00000549613 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
CALCOCO1-214ENST00000549613 KIF14Q15058 1648 aa20.58■□□□□ 0.89
CALCOCO1-214ENST00000549613 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
CALCOCO1-214ENST00000549613 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
CALCOCO1-214ENST00000549613 TCOF1Q13428 1488 aaKnown RBP20.55■□□□□ 0.88
CALCOCO1-214ENST00000549613 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
CALCOCO1-214ENST00000549613 ITGAEP38570 1179 aa20.54■□□□□ 0.88
CALCOCO1-214ENST00000549613 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
CALCOCO1-214ENST00000549613 ITSN2Q9NZM3 1697 aa20.52■□□□□ 0.88
CALCOCO1-214ENST00000549613 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
CALCOCO1-214ENST00000549613 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
CALCOCO1-214ENST00000549613 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
CALCOCO1-214ENST00000549613 WDR7Q9Y4E6 1490 aa20.44■□□□□ 0.86
CALCOCO1-214ENST00000549613 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
CALCOCO1-214ENST00000549613 ZNF777Q9ULD5 760 aaPredicted RBP20.42■□□□□ 0.86
CALCOCO1-214ENST00000549613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
CALCOCO1-214ENST00000549613 HRCP23327 699 aa20.41■□□□□ 0.86
CALCOCO1-214ENST00000549613 CCER1Q8TC90 406 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms