RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
ERBB3-210ENST00000549472 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
ERBB3-210ENST00000549472 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
ERBB3-210ENST00000549472 SYNJ2O15056 1496 aa18.62■□□□□ 0.57
ERBB3-210ENST00000549472 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
ERBB3-210ENST00000549472 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
ERBB3-210ENST00000549472 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
ERBB3-210ENST00000549472 SAMD9Q5K651 1589 aa18.54■□□□□ 0.56
ERBB3-210ENST00000549472 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
ERBB3-210ENST00000549472 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
ERBB3-210ENST00000549472 CHD1O14646 1710 aa18.49■□□□□ 0.55
ERBB3-210ENST00000549472 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
ERBB3-210ENST00000549472 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
ERBB3-210ENST00000549472 APLP2Q06481 763 aa18.45■□□□□ 0.54
ERBB3-210ENST00000549472 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
ERBB3-210ENST00000549472 NUP160Q12769 1436 aa18.42■□□□□ 0.54
ERBB3-210ENST00000549472 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
ERBB3-210ENST00000549472 FMN1Q68DA7 1419 aa18.42■□□□□ 0.54
ERBB3-210ENST00000549472 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
ERBB3-210ENST00000549472 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
ERBB3-210ENST00000549472 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
ERBB3-210ENST00000549472 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
ERBB3-210ENST00000549472 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
ERBB3-210ENST00000549472 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
ERBB3-210ENST00000549472 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
ERBB3-210ENST00000549472 CFAP43Q8NDM7 1665 aa18.36■□□□□ 0.53
ERBB3-210ENST00000549472 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
ERBB3-210ENST00000549472 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
ERBB3-210ENST00000549472 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
ERBB3-210ENST00000549472 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
ERBB3-210ENST00000549472 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
ERBB3-210ENST00000549472 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
ERBB3-210ENST00000549472 HECW1Q76N89 1606 aa18.25■□□□□ 0.51
ERBB3-210ENST00000549472 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
ERBB3-210ENST00000549472 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
ERBB3-210ENST00000549472 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
ERBB3-210ENST00000549472 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
ERBB3-210ENST00000549472 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
ERBB3-210ENST00000549472 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
ERBB3-210ENST00000549472 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
ERBB3-210ENST00000549472 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
ERBB3-210ENST00000549472 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
ERBB3-210ENST00000549472 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
ERBB3-210ENST00000549472 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
ERBB3-210ENST00000549472 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
ERBB3-210ENST00000549472 PTPRGP23470 1445 aa18.09■□□□□ 0.49
ERBB3-210ENST00000549472 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
ERBB3-210ENST00000549472 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
ERBB3-210ENST00000549472 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
ERBB3-210ENST00000549472 ABCA8O94911 1581 aa18.07■□□□□ 0.48
ERBB3-210ENST00000549472 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
ERBB3-210ENST00000549472 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
ERBB3-210ENST00000549472 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
ERBB3-210ENST00000549472 HRCP23327 699 aa18.04■□□□□ 0.48
ERBB3-210ENST00000549472 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
ERBB3-210ENST00000549472 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
ERBB3-210ENST00000549472 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
ERBB3-210ENST00000549472 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
ERBB3-210ENST00000549472 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
ERBB3-210ENST00000549472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.47
ERBB3-210ENST00000549472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
ERBB3-210ENST00000549472 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
ERBB3-210ENST00000549472 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
ERBB3-210ENST00000549472 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
ERBB3-210ENST00000549472 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
ERBB3-210ENST00000549472 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
ERBB3-210ENST00000549472 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
ERBB3-210ENST00000549472 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
ERBB3-210ENST00000549472 ADCY10Q96PN6 1610 aa17.94■□□□□ 0.46
ERBB3-210ENST00000549472 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
ERBB3-210ENST00000549472 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
ERBB3-210ENST00000549472 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
ERBB3-210ENST00000549472 ATP10BO94823 1461 aa17.91■□□□□ 0.46
ERBB3-210ENST00000549472 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
ERBB3-210ENST00000549472 ABCC2Q92887 1545 aa17.91■□□□□ 0.46
ERBB3-210ENST00000549472 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-210ENST00000549472 ARID3CA6NKF2 412 aa17.89■□□□□ 0.45
ERBB3-210ENST00000549472 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
ERBB3-210ENST00000549472 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
ERBB3-210ENST00000549472 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
ERBB3-210ENST00000549472 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
ERBB3-210ENST00000549472 ITSN2Q9NZM3 1697 aa17.86■□□□□ 0.45
ERBB3-210ENST00000549472 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
ERBB3-210ENST00000549472 KIF14Q15058 1648 aa17.84■□□□□ 0.45
ERBB3-210ENST00000549472 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
ERBB3-210ENST00000549472 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
ERBB3-210ENST00000549472 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
ERBB3-210ENST00000549472 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
ERBB3-210ENST00000549472 ZCCHC11Q5TAX3 1644 aaKnown RBP17.78■□□□□ 0.44
ERBB3-210ENST00000549472 ABCC10Q5T3U5 1492 aa17.77■□□□□ 0.44
ERBB3-210ENST00000549472 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
ERBB3-210ENST00000549472 GPATCH8Q9UKJ3 1502 aaKnown RBP17.75■□□□□ 0.43
ERBB3-210ENST00000549472 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
ERBB3-210ENST00000549472 ITGAEP38570 1179 aa17.74■□□□□ 0.43
ERBB3-210ENST00000549472 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
ERBB3-210ENST00000549472 AKNAQ7Z591 1439 aa17.71■□□□□ 0.43
ERBB3-210ENST00000549472 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
ERBB3-210ENST00000549472 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
ERBB3-210ENST00000549472 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
ERBB3-210ENST00000549472 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms