RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
ERBB3-210ENST00000549472 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
ERBB3-210ENST00000549472 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
ERBB3-210ENST00000549472 ABCC9O60706 1549 aa22.56■■□□□ 1.2
ERBB3-210ENST00000549472 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
ERBB3-210ENST00000549472 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
ERBB3-210ENST00000549472 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
ERBB3-210ENST00000549472 NACADO15069 1562 aa22.02■■□□□ 1.12
ERBB3-210ENST00000549472 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
ERBB3-210ENST00000549472 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
ERBB3-210ENST00000549472 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
ERBB3-210ENST00000549472 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
ERBB3-210ENST00000549472 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
ERBB3-210ENST00000549472 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
ERBB3-210ENST00000549472 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
ERBB3-210ENST00000549472 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
ERBB3-210ENST00000549472 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
ERBB3-210ENST00000549472 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
ERBB3-210ENST00000549472 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
ERBB3-210ENST00000549472 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
ERBB3-210ENST00000549472 WIZO95785 1651 aa20.67■□□□□ 0.9
ERBB3-210ENST00000549472 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
ERBB3-210ENST00000549472 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
ERBB3-210ENST00000549472 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
ERBB3-210ENST00000549472 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
ERBB3-210ENST00000549472 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
ERBB3-210ENST00000549472 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
ERBB3-210ENST00000549472 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
ERBB3-210ENST00000549472 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
ERBB3-210ENST00000549472 HMGXB3Q12766 1538 aa20.27■□□□□ 0.83
ERBB3-210ENST00000549472 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
ERBB3-210ENST00000549472 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
ERBB3-210ENST00000549472 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
ERBB3-210ENST00000549472 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
ERBB3-210ENST00000549472 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
ERBB3-210ENST00000549472 CFTRP13569 1480 aa19.79■□□□□ 0.76
ERBB3-210ENST00000549472 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
ERBB3-210ENST00000549472 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
ERBB3-210ENST00000549472 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
ERBB3-210ENST00000549472 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
ERBB3-210ENST00000549472 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
ERBB3-210ENST00000549472 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
ERBB3-210ENST00000549472 NESP48681 1621 aa19.6■□□□□ 0.73
ERBB3-210ENST00000549472 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
ERBB3-210ENST00000549472 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
ERBB3-210ENST00000549472 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
ERBB3-210ENST00000549472 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
ERBB3-210ENST00000549472 EEA1Q15075 1411 aa19.5■□□□□ 0.71
ERBB3-210ENST00000549472 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
ERBB3-210ENST00000549472 CUX1P39880 1505 aa19.48■□□□□ 0.71
ERBB3-210ENST00000549472 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
ERBB3-210ENST00000549472 SOGA1O94964 1423 aa19.4■□□□□ 0.7
ERBB3-210ENST00000549472 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
ERBB3-210ENST00000549472 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
ERBB3-210ENST00000549472 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
ERBB3-210ENST00000549472 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
ERBB3-210ENST00000549472 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
ERBB3-210ENST00000549472 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
ERBB3-210ENST00000549472 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
ERBB3-210ENST00000549472 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.67
ERBB3-210ENST00000549472 KIF21BO75037 1637 aa19.24■□□□□ 0.67
ERBB3-210ENST00000549472 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
ERBB3-210ENST00000549472 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
ERBB3-210ENST00000549472 WDR62O43379 1518 aa19.19■□□□□ 0.66
ERBB3-210ENST00000549472 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
ERBB3-210ENST00000549472 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
ERBB3-210ENST00000549472 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
ERBB3-210ENST00000549472 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
ERBB3-210ENST00000549472 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
ERBB3-210ENST00000549472 CUX2O14529 1486 aa19.12■□□□□ 0.65
ERBB3-210ENST00000549472 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
ERBB3-210ENST00000549472 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
ERBB3-210ENST00000549472 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
ERBB3-210ENST00000549472 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
ERBB3-210ENST00000549472 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
ERBB3-210ENST00000549472 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
ERBB3-210ENST00000549472 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
ERBB3-210ENST00000549472 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
ERBB3-210ENST00000549472 IGF1RP08069 1367 aa19.01■□□□□ 0.63
ERBB3-210ENST00000549472 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
ERBB3-210ENST00000549472 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
ERBB3-210ENST00000549472 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
ERBB3-210ENST00000549472 CUL7Q14999 1698 aa18.97■□□□□ 0.63
ERBB3-210ENST00000549472 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
ERBB3-210ENST00000549472 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
ERBB3-210ENST00000549472 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
ERBB3-210ENST00000549472 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
ERBB3-210ENST00000549472 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.612e-9■■■□□ 18.5
ERBB3-210ENST00000549472 CLIP1P30622 1438 aa18.83■□□□□ 0.61
ERBB3-210ENST00000549472 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
ERBB3-210ENST00000549472 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
ERBB3-210ENST00000549472 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
ERBB3-210ENST00000549472 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
ERBB3-210ENST00000549472 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
ERBB3-210ENST00000549472 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
ERBB3-210ENST00000549472 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
ERBB3-210ENST00000549472 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
ERBB3-210ENST00000549472 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
ERBB3-210ENST00000549472 FBLN2P98095 1184 aa18.67■□□□□ 0.58
ERBB3-210ENST00000549472 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms