RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 CTTNBP2Q8WZ74 1663 aa30.96■■■□□ 2.55
KRT18-206ENST00000549078 CLIP1P30622 1438 aa30.96■■■□□ 2.55
KRT18-206ENST00000549078 CHD1O14646 1710 aa30.82■■■□□ 2.52
KRT18-206ENST00000549078 CEP170Q5SW79 1584 aa30.82■■■□□ 2.52
KRT18-206ENST00000549078 NUP160Q12769 1436 aa30.8■■■□□ 2.52
KRT18-206ENST00000549078 ARHGAP35Q9NRY4 1499 aa30.79■■■□□ 2.52
KRT18-206ENST00000549078 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
KRT18-206ENST00000549078 IQGAP2Q13576 1575 aa30.77■■■□□ 2.52
KRT18-206ENST00000549078 ARAP1Q96P48 1450 aa30.71■■■□□ 2.51
KRT18-206ENST00000549078 EFCAB5A4FU69 1503 aa30.67■■■□□ 2.5
KRT18-206ENST00000549078 P3H3Q8IVL6 736 aa30.65■■■□□ 2.5
KRT18-206ENST00000549078 SAMD9Q5K651 1589 aa30.64■■■□□ 2.49
KRT18-206ENST00000549078 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
KRT18-206ENST00000549078 VPS8Q8N3P4 1428 aa30.62■■■□□ 2.49
KRT18-206ENST00000549078 FHOD3Q2V2M9 1422 aa30.58■■■□□ 2.49
KRT18-206ENST00000549078 JPH4Q96JJ6 628 aa30.57■■■□□ 2.48
KRT18-206ENST00000549078 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
KRT18-206ENST00000549078 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
KRT18-206ENST00000549078 KIAA0556O60303 1618 aa30.47■■■□□ 2.47
KRT18-206ENST00000549078 SHROOM2Q13796 1616 aa30.42■■■□□ 2.46
KRT18-206ENST00000549078 FMN1Q68DA7 1419 aa30.4■■■□□ 2.46
KRT18-206ENST00000549078 CARMIL2Q6F5E8 1435 aa30.4■■■□□ 2.46
KRT18-206ENST00000549078 OSCARQ8IYS5 282 aa30.39■■■□□ 2.46
KRT18-206ENST00000549078 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.45
KRT18-206ENST00000549078 PCF11O94913 1555 aaKnown RBP30.33■■■□□ 2.45
KRT18-206ENST00000549078 PPARGC1BQ86YN6 1023 aaKnown RBP30.32■■■□□ 2.44
KRT18-206ENST00000549078 CASKIN1Q8WXD9 1431 aa30.31■■■□□ 2.44
KRT18-206ENST00000549078 APLP2Q06481 763 aa30.29■■■□□ 2.44
KRT18-206ENST00000549078 TTBK1Q5TCY1 1321 aaPredicted RBP30.29■■■□□ 2.44
KRT18-206ENST00000549078 FYCO1Q9BQS8 1478 aa30.27■■■□□ 2.44
KRT18-206ENST00000549078 ERCC6L2Q5T890 1561 aa30.26■■■□□ 2.43
KRT18-206ENST00000549078 ATP1B4Q9UN42 357 aaPredicted RBP30.25■■■□□ 2.43
KRT18-206ENST00000549078 PTPRGP23470 1445 aa30.16■■■□□ 2.42
KRT18-206ENST00000549078 MAP3K1Q13233 1512 aa30.15■■■□□ 2.42
KRT18-206ENST00000549078 TIAM1Q13009 1591 aa30.14■■■□□ 2.42
KRT18-206ENST00000549078 LRRIQ1Q96JM4 1722 aa30.13■■■□□ 2.41
KRT18-206ENST00000549078 KANK4Q5T7N3 995 aaPredicted RBP30.13■■■□□ 2.41
KRT18-206ENST00000549078 PLB1Q6P1J6 1458 aa30.13■■■□□ 2.41
KRT18-206ENST00000549078 RAPGEF6Q8TEU7 1601 aa30.12■■■□□ 2.41
KRT18-206ENST00000549078 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
KRT18-206ENST00000549078 CFAP43Q8NDM7 1665 aa30.09■■■□□ 2.41
KRT18-206ENST00000549078 ABCA8O94911 1581 aa30.07■■■□□ 2.4
KRT18-206ENST00000549078 NUP153P49790 1475 aaKnown RBP30.06■■■□□ 2.4
KRT18-206ENST00000549078 EPRSP07814 1512 aaKnown RBP30.04■■■□□ 2.4
KRT18-206ENST00000549078 CCDC18Q5T9S5 1454 aa30.03■■■□□ 2.4
KRT18-206ENST00000549078 ARID3CA6NKF2 412 aa30.02■■■□□ 2.4
KRT18-206ENST00000549078 LRRC9Q6ZRR7 1453 aa30.01■■■□□ 2.39
KRT18-206ENST00000549078 CDK13Q14004 1512 aaKnown RBP29.99■■■□□ 2.39
KRT18-206ENST00000549078 UACAQ9BZF9 1416 aa29.98■■■□□ 2.39
KRT18-206ENST00000549078 TRIM26Q12899 539 aaPredicted RBP29.97■■■□□ 2.39
KRT18-206ENST00000549078 MTUS2Q5JR59 1369 aa29.88■■■□□ 2.37
KRT18-206ENST00000549078 MAGI3Q5TCQ9 1506 aa29.88■■■□□ 2.37
KRT18-206ENST00000549078 ABCC2Q92887 1545 aa29.88■■■□□ 2.37
KRT18-206ENST00000549078 ATP10BO94823 1461 aa29.88■■■□□ 2.37
KRT18-206ENST00000549078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.87■■■□□ 2.37
KRT18-206ENST00000549078 HNRNPUL2Q1KMD3 747 aaKnown RBP29.87■■■□□ 2.37
KRT18-206ENST00000549078 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
KRT18-206ENST00000549078 PCGF6Q9BYE7 350 aa29.86■■■□□ 2.37
KRT18-206ENST00000549078 UHRF1BP1LA0JNW5 1464 aa29.84■■■□□ 2.37
KRT18-206ENST00000549078 EHBP1L1Q8N3D4 1523 aa29.82■■■□□ 2.36
KRT18-206ENST00000549078 CDK11AQ9UQ88 783 aaPredicted RBP29.81■■■□□ 2.36
KRT18-206ENST00000549078 ADCY10Q96PN6 1610 aa29.76■■■□□ 2.35
KRT18-206ENST00000549078 RIMBP3CA6NJZ7 1639 aa29.76■■■□□ 2.35
KRT18-206ENST00000549078 RIMBP3BA6NNM3 1639 aa29.76■■■□□ 2.35
KRT18-206ENST00000549078 RIMBP3Q9UFD9 1639 aa29.76■■■□□ 2.35
KRT18-206ENST00000549078 SUPT6HQ7KZ85 1726 aaKnown RBP29.73■■■□□ 2.35
KRT18-206ENST00000549078 PHLDB1Q86UU1 1377 aa29.73■■■□□ 2.35
KRT18-206ENST00000549078 KDM5BQ9UGL1 1544 aa29.72■■■□□ 2.35
KRT18-206ENST00000549078 TROQ12816 1431 aaPredicted RBP29.72■■■□□ 2.35
KRT18-206ENST00000549078 NCOA2Q15596 1464 aa29.72■■■□□ 2.35
KRT18-206ENST00000549078 PLEKHD1A6NEE1 506 aa29.72■■■□□ 2.35
KRT18-206ENST00000549078 ZCCHC11Q5TAX3 1644 aaKnown RBP29.69■■■□□ 2.34
KRT18-206ENST00000549078 RRBP1Q9P2E9 1410 aaKnown RBP29.64■■■□□ 2.34
KRT18-206ENST00000549078 CYB5RLQ6IPT4 315 aa29.62■■■□□ 2.33
KRT18-206ENST00000549078 KIF14Q15058 1648 aa29.6■■■□□ 2.33
KRT18-206ENST00000549078 CCNB3Q8WWL7 1395 aa29.58■■■□□ 2.33
KRT18-206ENST00000549078 MYOM3Q5VTT5 1437 aa29.57■■■□□ 2.32
KRT18-206ENST00000549078 FGD6Q6ZV73 1430 aa29.53■■■□□ 2.32
KRT18-206ENST00000549078 NPM1P06748 294 aaKnown RBP eCLIP29.52■■■□□ 2.32
KRT18-206ENST00000549078 ABCC10Q5T3U5 1492 aa29.49■■■□□ 2.31
KRT18-206ENST00000549078 KCNH8Q96L42 1107 aa29.48■■■□□ 2.31
KRT18-206ENST00000549078 FAM50AQ14320 339 aaKnown RBP29.45■■■□□ 2.31
KRT18-206ENST00000549078 GPATCH8Q9UKJ3 1502 aaKnown RBP29.45■■■□□ 2.3
KRT18-206ENST00000549078 WDR7Q9Y4E6 1490 aa29.45■■■□□ 2.3
KRT18-206ENST00000549078 ASXL2Q76L83 1435 aa29.45■■■□□ 2.3
KRT18-206ENST00000549078 MIA2Q96PC5 1412 aa29.43■■■□□ 2.3
KRT18-206ENST00000549078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.41■■■□□ 2.3
KRT18-206ENST00000549078 PTPN23Q9H3S7 1636 aa29.41■■■□□ 2.3
KRT18-206ENST00000549078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.41■■■□□ 2.36e-6■■■■□ 21.5
KRT18-206ENST00000549078 CDC42BPAQ5VT25 1732 aa29.39■■■□□ 2.3
KRT18-206ENST00000549078 ITSN2Q9NZM3 1697 aa29.39■■■□□ 2.29
KRT18-206ENST00000549078 TTC37Q6PGP7 1564 aa29.38■■■□□ 2.29
KRT18-206ENST00000549078 TCOF1Q13428 1488 aaKnown RBP29.37■■■□□ 2.29
KRT18-206ENST00000549078 CFDP1Q9UEE9 299 aaPredicted RBP29.36■■■□□ 2.29
KRT18-206ENST00000549078 ITGAEP38570 1179 aa29.34■■■□□ 2.29
KRT18-206ENST00000549078 ZNF644Q9H582 1327 aaPredicted RBP29.31■■■□□ 2.28
KRT18-206ENST00000549078 MAPKBP1O60336 1514 aa29.3■■■□□ 2.28
KRT18-206ENST00000549078 PREX2Q70Z35 1606 aa29.29■■■□□ 2.28
KRT18-206ENST00000549078 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
KRT18-206ENST00000549078 ZNF777Q9ULD5 760 aaPredicted RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms