RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
KRT18-206ENST00000549078 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
KRT18-206ENST00000549078 ZCCHC6Q5VYS8 1495 aaKnown RBP37.59■■■■□ 3.61
KRT18-206ENST00000549078 ABCC9O60706 1549 aa37.53■■■■□ 3.6
KRT18-206ENST00000549078 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
KRT18-206ENST00000549078 DCAF1Q9Y4B6 1507 aa37.09■■■■□ 3.53
KRT18-206ENST00000549078 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
KRT18-206ENST00000549078 NACADO15069 1562 aa36.7■■■■□ 3.47
KRT18-206ENST00000549078 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
KRT18-206ENST00000549078 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
KRT18-206ENST00000549078 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
KRT18-206ENST00000549078 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
KRT18-206ENST00000549078 BICRAQ9NZM4 1560 aa35.41■■■■□ 3.26
KRT18-206ENST00000549078 PABPN1Q86U42 306 aaKnown RBP eCLIP35.34■■■■□ 3.25
KRT18-206ENST00000549078 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
KRT18-206ENST00000549078 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
KRT18-206ENST00000549078 RSF1Q96T23 1441 aaPredicted RBP34.66■■■■□ 3.14
KRT18-206ENST00000549078 BAZ1AQ9NRL2 1556 aaPredicted RBP34.66■■■■□ 3.14
KRT18-206ENST00000549078 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
KRT18-206ENST00000549078 SMARCA4P51532 1647 aa34.57■■■■□ 3.12
KRT18-206ENST00000549078 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
KRT18-206ENST00000549078 WIZO95785 1651 aa34.34■■■■□ 3.09
KRT18-206ENST00000549078 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
KRT18-206ENST00000549078 ATAD2BQ9ULI0 1458 aa34.11■■■■□ 3.05
KRT18-206ENST00000549078 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
KRT18-206ENST00000549078 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
KRT18-206ENST00000549078 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
KRT18-206ENST00000549078 NCAPD3P42695 1498 aa33.89■■■■□ 3.02
KRT18-206ENST00000549078 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
KRT18-206ENST00000549078 HMGXB3Q12766 1538 aa33.79■■■■□ 3
KRT18-206ENST00000549078 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
KRT18-206ENST00000549078 DNAJC5BQ9UF47 199 aa33.52■■■□□ 2.96
KRT18-206ENST00000549078 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
KRT18-206ENST00000549078 CFTRP13569 1480 aa33.03■■■□□ 2.88
KRT18-206ENST00000549078 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
KRT18-206ENST00000549078 NESP48681 1621 aa32.84■■■□□ 2.85
KRT18-206ENST00000549078 PRDM2Q13029 1718 aa32.81■■■□□ 2.84
KRT18-206ENST00000549078 LAMC3Q9Y6N6 1575 aa32.78■■■□□ 2.84
KRT18-206ENST00000549078 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
KRT18-206ENST00000549078 TRIM41Q8WV44 630 aa32.7■■■□□ 2.82
KRT18-206ENST00000549078 WRNQ14191 1432 aaPredicted RBP eCLIP32.62■■■□□ 2.81
KRT18-206ENST00000549078 FANCD2Q9BXW9 1451 aa32.62■■■□□ 2.81
KRT18-206ENST00000549078 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
KRT18-206ENST00000549078 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
KRT18-206ENST00000549078 CEP164Q9UPV0 1460 aa32.44■■■□□ 2.78
KRT18-206ENST00000549078 CUX1P39880 1505 aa32.43■■■□□ 2.78
KRT18-206ENST00000549078 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
KRT18-206ENST00000549078 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
KRT18-206ENST00000549078 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
KRT18-206ENST00000549078 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
KRT18-206ENST00000549078 URB2Q14146 1524 aaKnown RBP32.24■■■□□ 2.75
KRT18-206ENST00000549078 TOPBP1Q92547 1522 aa32.23■■■□□ 2.75
KRT18-206ENST00000549078 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
KRT18-206ENST00000549078 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
KRT18-206ENST00000549078 FGD5Q6ZNL6 1462 aa32.12■■■□□ 2.73
KRT18-206ENST00000549078 SOGA1O94964 1423 aa32.1■■■□□ 2.73
KRT18-206ENST00000549078 FAM9AQ8IZU1 332 aaPredicted RBP32.08■■■□□ 2.73
KRT18-206ENST00000549078 POLA1P09884 1462 aaPredicted RBP32.04■■■□□ 2.72
KRT18-206ENST00000549078 RUSC2Q8N2Y8 1516 aa32.01■■■□□ 2.71
KRT18-206ENST00000549078 WDR62O43379 1518 aa32■■■□□ 2.71
KRT18-206ENST00000549078 THOC2Q8NI27 1593 aaKnown RBP32■■■□□ 2.71
KRT18-206ENST00000549078 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
KRT18-206ENST00000549078 EEA1Q15075 1411 aa31.91■■■□□ 2.7
KRT18-206ENST00000549078 CUX2O14529 1486 aa31.84■■■□□ 2.69
KRT18-206ENST00000549078 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
KRT18-206ENST00000549078 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
KRT18-206ENST00000549078 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
KRT18-206ENST00000549078 LOC105371045A0A1W2PR82 267 aa31.79■■■□□ 2.68
KRT18-206ENST00000549078 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
KRT18-206ENST00000549078 WDR97A6NE52 1622 aa31.76■■■□□ 2.68
KRT18-206ENST00000549078 IFT140Q96RY7 1462 aa31.7■■■□□ 2.66
KRT18-206ENST00000549078 TDRD9Q8NDG6 1382 aaKnown RBP31.67■■■□□ 2.66
KRT18-206ENST00000549078 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
KRT18-206ENST00000549078 IGF1RP08069 1367 aa31.62■■■□□ 2.65
KRT18-206ENST00000549078 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
KRT18-206ENST00000549078 GAPVD1Q14C86 1478 aa31.57■■■□□ 2.64
KRT18-206ENST00000549078 ZNF608Q9ULD9 1512 aaPredicted RBP31.56■■■□□ 2.64
KRT18-206ENST00000549078 AQRO60306 1485 aaKnown RBP eCLIP31.53■■■□□ 2.642e-7■■■■□ 21.9
KRT18-206ENST00000549078 KIF21BO75037 1637 aa31.53■■■□□ 2.64
KRT18-206ENST00000549078 PRXQ9BXM0 1461 aa31.52■■■□□ 2.64
KRT18-206ENST00000549078 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
KRT18-206ENST00000549078 ERICH3Q5RHP9 1530 aa31.45■■■□□ 2.63
KRT18-206ENST00000549078 RAPGEF2Q9Y4G8 1499 aa31.45■■■□□ 2.62
KRT18-206ENST00000549078 CARMIL1Q5VZK9 1371 aa31.43■■■□□ 2.62
KRT18-206ENST00000549078 EIF4G3O43432 1585 aaKnown RBP31.42■■■□□ 2.62
KRT18-206ENST00000549078 PBRM1Q86U86 1689 aa31.4■■■□□ 2.62
KRT18-206ENST00000549078 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
KRT18-206ENST00000549078 CUL7Q14999 1698 aa31.37■■■□□ 2.61
KRT18-206ENST00000549078 UBTFP17480 764 aaKnown RBP31.36■■■□□ 2.61
KRT18-206ENST00000549078 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
KRT18-206ENST00000549078 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
KRT18-206ENST00000549078 FHAD1B1AJZ9 1412 aa31.22■■■□□ 2.59
KRT18-206ENST00000549078 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
KRT18-206ENST00000549078 MAGI1Q96QZ7 1491 aaPredicted RBP31.16■■■□□ 2.58
KRT18-206ENST00000549078 CEP162Q5TB80 1403 aa31.1■■■□□ 2.57
KRT18-206ENST00000549078 SYNJ2O15056 1496 aa31.05■■■□□ 2.56
KRT18-206ENST00000549078 CHMP7Q8WUX9 453 aaPredicted RBP31■■■□□ 2.55
KRT18-206ENST00000549078 GRIN2AQ12879 1464 aa30.99■■■□□ 2.55
KRT18-206ENST00000549078 RANGAP1P46060 587 aaPredicted RBP30.97■■■□□ 2.55
KRT18-206ENST00000549078 FBLN2P98095 1184 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms