RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
SLC48A1-206ENST00000548498 TSPOAP1O95153 1857 aa17.63■□□□□ 0.41
SLC48A1-206ENST00000548498 ADCY10Q96PN6 1610 aa17.62■□□□□ 0.41
SLC48A1-206ENST00000548498 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
SLC48A1-206ENST00000548498 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.41
SLC48A1-206ENST00000548498 KDM6BO15054 1643 aa17.57■□□□□ 0.4
SLC48A1-206ENST00000548498 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
SLC48A1-206ENST00000548498 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
SLC48A1-206ENST00000548498 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
SLC48A1-206ENST00000548498 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
SLC48A1-206ENST00000548498 CUL7Q14999 1698 aa17.45■□□□□ 0.38
SLC48A1-206ENST00000548498 KDM4FA0A1W2PPD8 638 aa17.42■□□□□ 0.38
SLC48A1-206ENST00000548498 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
SLC48A1-206ENST00000548498 KIAA0586Q9BVV6 1533 aa17.39■□□□□ 0.37
SLC48A1-206ENST00000548498 GLI2P10070 1586 aa17.31■□□□□ 0.36
SLC48A1-206ENST00000548498 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
SLC48A1-206ENST00000548498 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
SLC48A1-206ENST00000548498 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
SLC48A1-206ENST00000548498 IGF1RP08069 1367 aa17.28■□□□□ 0.36
SLC48A1-206ENST00000548498 IQGAP2Q13576 1575 aa17.27■□□□□ 0.35
SLC48A1-206ENST00000548498 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
SLC48A1-206ENST00000548498 PTPRGP23470 1445 aa17.26■□□□□ 0.35
SLC48A1-206ENST00000548498 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
SLC48A1-206ENST00000548498 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
SLC48A1-206ENST00000548498 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
SLC48A1-206ENST00000548498 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
SLC48A1-206ENST00000548498 PLB1Q6P1J6 1458 aa17.22■□□□□ 0.35
SLC48A1-206ENST00000548498 HECW2Q9P2P5 1572 aa17.22■□□□□ 0.35
SLC48A1-206ENST00000548498 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
SLC48A1-206ENST00000548498 COL17A1Q9UMD9 1497 aaPredicted RBP17.21■□□□□ 0.35
SLC48A1-206ENST00000548498 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
SLC48A1-206ENST00000548498 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
SLC48A1-206ENST00000548498 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
SLC48A1-206ENST00000548498 EPRSP07814 1512 aaKnown RBP17.17■□□□□ 0.34
SLC48A1-206ENST00000548498 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
SLC48A1-206ENST00000548498 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
SLC48A1-206ENST00000548498 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
SLC48A1-206ENST00000548498 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
SLC48A1-206ENST00000548498 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
SLC48A1-206ENST00000548498 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
SLC48A1-206ENST00000548498 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
SLC48A1-206ENST00000548498 CFAP43Q8NDM7 1665 aa17.09■□□□□ 0.33
SLC48A1-206ENST00000548498 KIF21BO75037 1637 aa17.08■□□□□ 0.32
SLC48A1-206ENST00000548498 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
SLC48A1-206ENST00000548498 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
SLC48A1-206ENST00000548498 ABCA8O94911 1581 aa16.98■□□□□ 0.31
SLC48A1-206ENST00000548498 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
SLC48A1-206ENST00000548498 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
SLC48A1-206ENST00000548498 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
SLC48A1-206ENST00000548498 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
SLC48A1-206ENST00000548498 ABCA9Q8IUA7 1624 aa16.86■□□□□ 0.29
SLC48A1-206ENST00000548498 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
SLC48A1-206ENST00000548498 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
SLC48A1-206ENST00000548498 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
SLC48A1-206ENST00000548498 FRMPD1Q5SYB0 1578 aa16.84■□□□□ 0.29
SLC48A1-206ENST00000548498 MADDQ8WXG6 1647 aa16.83■□□□□ 0.28
SLC48A1-206ENST00000548498 PTPRMP28827 1452 aa16.81■□□□□ 0.28
SLC48A1-206ENST00000548498 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
SLC48A1-206ENST00000548498 FBXO41Q8TF61 875 aa16.77■□□□□ 0.28
SLC48A1-206ENST00000548498 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
SLC48A1-206ENST00000548498 ATP10BO94823 1461 aa16.76■□□□□ 0.27
SLC48A1-206ENST00000548498 RAPGEF6Q8TEU7 1601 aa16.76■□□□□ 0.27
SLC48A1-206ENST00000548498 SAMD9Q5K651 1589 aa16.76■□□□□ 0.27
SLC48A1-206ENST00000548498 RICTORQ6R327 1708 aa16.76■□□□□ 0.27
SLC48A1-206ENST00000548498 PRXQ9BXM0 1461 aa16.75■□□□□ 0.27
SLC48A1-206ENST00000548498 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
SLC48A1-206ENST00000548498 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
SLC48A1-206ENST00000548498 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
SLC48A1-206ENST00000548498 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
SLC48A1-206ENST00000548498 NEO1Q92859 1461 aa16.71■□□□□ 0.27
SLC48A1-206ENST00000548498 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
SLC48A1-206ENST00000548498 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
SLC48A1-206ENST00000548498 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
SLC48A1-206ENST00000548498 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
SLC48A1-206ENST00000548498 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
SLC48A1-206ENST00000548498 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
SLC48A1-206ENST00000548498 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SLC48A1-206ENST00000548498 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
SLC48A1-206ENST00000548498 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
SLC48A1-206ENST00000548498 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
SLC48A1-206ENST00000548498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.58■□□□□ 0.246e-9■■■□□ 15.3
SLC48A1-206ENST00000548498 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
SLC48A1-206ENST00000548498 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
SLC48A1-206ENST00000548498 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
SLC48A1-206ENST00000548498 EFCAB5A4FU69 1503 aa16.55■□□□□ 0.24
SLC48A1-206ENST00000548498 FANCAO15360 1455 aa16.55■□□□□ 0.24
SLC48A1-206ENST00000548498 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
SLC48A1-206ENST00000548498 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
SLC48A1-206ENST00000548498 HSPA2P54652 639 aa16.54■□□□□ 0.24
SLC48A1-206ENST00000548498 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
SLC48A1-206ENST00000548498 YEATS2Q9ULM3 1422 aa16.53■□□□□ 0.24
SLC48A1-206ENST00000548498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
SLC48A1-206ENST00000548498 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
SLC48A1-206ENST00000548498 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
SLC48A1-206ENST00000548498 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
SLC48A1-206ENST00000548498 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
SLC48A1-206ENST00000548498 STRCQ7RTU9 1775 aa16.5■□□□□ 0.23
SLC48A1-206ENST00000548498 POGZQ7Z3K3 1410 aa16.48■□□□□ 0.23
SLC48A1-206ENST00000548498 CDK13Q14004 1512 aaKnown RBP16.48■□□□□ 0.23
SLC48A1-206ENST00000548498 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms