RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
SLC48A1-206ENST00000548498 ABCC9O60706 1549 aa22.89■■□□□ 1.26
SLC48A1-206ENST00000548498 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
SLC48A1-206ENST00000548498 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
SLC48A1-206ENST00000548498 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
SLC48A1-206ENST00000548498 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
SLC48A1-206ENST00000548498 NACADO15069 1562 aa21.4■■□□□ 1.02
SLC48A1-206ENST00000548498 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
SLC48A1-206ENST00000548498 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
SLC48A1-206ENST00000548498 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
SLC48A1-206ENST00000548498 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
SLC48A1-206ENST00000548498 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
SLC48A1-206ENST00000548498 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
SLC48A1-206ENST00000548498 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
SLC48A1-206ENST00000548498 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
SLC48A1-206ENST00000548498 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
SLC48A1-206ENST00000548498 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
SLC48A1-206ENST00000548498 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.88
SLC48A1-206ENST00000548498 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
SLC48A1-206ENST00000548498 CUX2O14529 1486 aa19.85■□□□□ 0.77
SLC48A1-206ENST00000548498 ERCC6Q03468 1493 aa19.75■□□□□ 0.75
SLC48A1-206ENST00000548498 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
SLC48A1-206ENST00000548498 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
SLC48A1-206ENST00000548498 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
SLC48A1-206ENST00000548498 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
SLC48A1-206ENST00000548498 NESP48681 1621 aa19.6■□□□□ 0.73
SLC48A1-206ENST00000548498 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
SLC48A1-206ENST00000548498 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
SLC48A1-206ENST00000548498 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
SLC48A1-206ENST00000548498 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
SLC48A1-206ENST00000548498 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
SLC48A1-206ENST00000548498 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
SLC48A1-206ENST00000548498 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
SLC48A1-206ENST00000548498 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
SLC48A1-206ENST00000548498 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
SLC48A1-206ENST00000548498 WDR62O43379 1518 aa19.14■□□□□ 0.65
SLC48A1-206ENST00000548498 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
SLC48A1-206ENST00000548498 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
SLC48A1-206ENST00000548498 WIZO95785 1651 aa19.08■□□□□ 0.65
SLC48A1-206ENST00000548498 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
SLC48A1-206ENST00000548498 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
SLC48A1-206ENST00000548498 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
SLC48A1-206ENST00000548498 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
SLC48A1-206ENST00000548498 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
SLC48A1-206ENST00000548498 PRDM2Q13029 1718 aa18.87■□□□□ 0.61
SLC48A1-206ENST00000548498 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
SLC48A1-206ENST00000548498 CFTRP13569 1480 aa18.81■□□□□ 0.6
SLC48A1-206ENST00000548498 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
SLC48A1-206ENST00000548498 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
SLC48A1-206ENST00000548498 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
SLC48A1-206ENST00000548498 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
SLC48A1-206ENST00000548498 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
SLC48A1-206ENST00000548498 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
SLC48A1-206ENST00000548498 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
SLC48A1-206ENST00000548498 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
SLC48A1-206ENST00000548498 CHD1O14646 1710 aa18.61■□□□□ 0.57
SLC48A1-206ENST00000548498 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
SLC48A1-206ENST00000548498 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
SLC48A1-206ENST00000548498 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
SLC48A1-206ENST00000548498 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
SLC48A1-206ENST00000548498 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
SLC48A1-206ENST00000548498 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
SLC48A1-206ENST00000548498 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
SLC48A1-206ENST00000548498 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
SLC48A1-206ENST00000548498 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
SLC48A1-206ENST00000548498 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.53
SLC48A1-206ENST00000548498 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
SLC48A1-206ENST00000548498 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
SLC48A1-206ENST00000548498 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
SLC48A1-206ENST00000548498 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
SLC48A1-206ENST00000548498 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
SLC48A1-206ENST00000548498 FBLN2P98095 1184 aa18.22■□□□□ 0.51
SLC48A1-206ENST00000548498 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
SLC48A1-206ENST00000548498 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
SLC48A1-206ENST00000548498 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
SLC48A1-206ENST00000548498 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
SLC48A1-206ENST00000548498 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
SLC48A1-206ENST00000548498 SOGA1O94964 1423 aa18.15■□□□□ 0.5
SLC48A1-206ENST00000548498 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
SLC48A1-206ENST00000548498 CUX1P39880 1505 aa18.12■□□□□ 0.49
SLC48A1-206ENST00000548498 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
SLC48A1-206ENST00000548498 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
SLC48A1-206ENST00000548498 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
SLC48A1-206ENST00000548498 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
SLC48A1-206ENST00000548498 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
SLC48A1-206ENST00000548498 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
SLC48A1-206ENST00000548498 KIF13AQ9H1H9 1805 aa17.94■□□□□ 0.46
SLC48A1-206ENST00000548498 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
SLC48A1-206ENST00000548498 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
SLC48A1-206ENST00000548498 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
SLC48A1-206ENST00000548498 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
SLC48A1-206ENST00000548498 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
SLC48A1-206ENST00000548498 NUP160Q12769 1436 aa17.81■□□□□ 0.44
SLC48A1-206ENST00000548498 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
SLC48A1-206ENST00000548498 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
SLC48A1-206ENST00000548498 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
SLC48A1-206ENST00000548498 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.424e-7■■■■■ 80.6
SLC48A1-206ENST00000548498 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
SLC48A1-206ENST00000548498 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
SLC48A1-206ENST00000548498 DIP2BQ9P265 1576 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms