RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ARHGAP35Q9NRY4 1499 aa30.59■■■□□ 2.49
SKP2-208ENST00000546211 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
SKP2-208ENST00000546211 VPS8Q8N3P4 1428 aa30.57■■■□□ 2.48
SKP2-208ENST00000546211 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
SKP2-208ENST00000546211 EFCAB5A4FU69 1503 aa30.51■■■□□ 2.47
SKP2-208ENST00000546211 FBLN2P98095 1184 aa30.5■■■□□ 2.47
SKP2-208ENST00000546211 IQGAP2Q13576 1575 aa30.48■■■□□ 2.47
SKP2-208ENST00000546211 KIAA0586Q9BVV6 1533 aa30.44■■■□□ 2.46
SKP2-208ENST00000546211 SAMD9Q5K651 1589 aa30.39■■■□□ 2.46
SKP2-208ENST00000546211 CEP170Q5SW79 1584 aa30.39■■■□□ 2.46
SKP2-208ENST00000546211 NUP160Q12769 1436 aa30.38■■■□□ 2.45
SKP2-208ENST00000546211 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
SKP2-208ENST00000546211 FHOD3Q2V2M9 1422 aa30.34■■■□□ 2.45
SKP2-208ENST00000546211 UGGT2Q9NYU1 1516 aa30.32■■■□□ 2.44
SKP2-208ENST00000546211 APLP2Q06481 763 aa30.32■■■□□ 2.44
SKP2-208ENST00000546211 CHD1O14646 1710 aa30.31■■■□□ 2.44
SKP2-208ENST00000546211 PPARGC1BQ86YN6 1023 aaKnown RBP30.28■■■□□ 2.44
SKP2-208ENST00000546211 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
SKP2-208ENST00000546211 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
SKP2-208ENST00000546211 PCF11O94913 1555 aaKnown RBP30.16■■■□□ 2.42
SKP2-208ENST00000546211 KIAA0556O60303 1618 aa30.16■■■□□ 2.42
SKP2-208ENST00000546211 DISP1Q96F81 1524 aa30.15■■■□□ 2.42
SKP2-208ENST00000546211 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
SKP2-208ENST00000546211 FYCO1Q9BQS8 1478 aa30.14■■■□□ 2.42
SKP2-208ENST00000546211 CASKIN1Q8WXD9 1431 aa30.13■■■□□ 2.41
SKP2-208ENST00000546211 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
SKP2-208ENST00000546211 CARMIL2Q6F5E8 1435 aa30.1■■■□□ 2.41
SKP2-208ENST00000546211 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
SKP2-208ENST00000546211 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
SKP2-208ENST00000546211 ATP1B4Q9UN42 357 aaPredicted RBP30.06■■■□□ 2.4
SKP2-208ENST00000546211 TIAM1Q13009 1591 aa30.03■■■□□ 2.4
SKP2-208ENST00000546211 CFAP43Q8NDM7 1665 aa29.98■■■□□ 2.39
SKP2-208ENST00000546211 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
SKP2-208ENST00000546211 SHROOM2Q13796 1616 aa29.97■■■□□ 2.39
SKP2-208ENST00000546211 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
SKP2-208ENST00000546211 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
SKP2-208ENST00000546211 HECW1Q76N89 1606 aa29.94■■■□□ 2.38
SKP2-208ENST00000546211 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.38
SKP2-208ENST00000546211 CCDC18Q5T9S5 1454 aa29.87■■■□□ 2.37
SKP2-208ENST00000546211 RAPGEF6Q8TEU7 1601 aa29.86■■■□□ 2.37
SKP2-208ENST00000546211 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
SKP2-208ENST00000546211 EPRSP07814 1512 aaKnown RBP29.8■■■□□ 2.36
SKP2-208ENST00000546211 OSCARQ8IYS5 282 aa29.79■■■□□ 2.36
SKP2-208ENST00000546211 PTPRGP23470 1445 aa29.78■■■□□ 2.36
SKP2-208ENST00000546211 PLB1Q6P1J6 1458 aa29.77■■■□□ 2.36
SKP2-208ENST00000546211 NUP153P49790 1475 aaKnown RBP29.75■■■□□ 2.35
SKP2-208ENST00000546211 MTUS2Q5JR59 1369 aa29.75■■■□□ 2.35
SKP2-208ENST00000546211 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
SKP2-208ENST00000546211 ABCA8O94911 1581 aa29.73■■■□□ 2.35
SKP2-208ENST00000546211 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
SKP2-208ENST00000546211 EHBP1L1Q8N3D4 1523 aa29.7■■■□□ 2.34
SKP2-208ENST00000546211 ARID3CA6NKF2 412 aa29.67■■■□□ 2.34
SKP2-208ENST00000546211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
SKP2-208ENST00000546211 HNRNPUL2Q1KMD3 747 aaKnown RBP29.62■■■□□ 2.33
SKP2-208ENST00000546211 MAGI3Q5TCQ9 1506 aa29.62■■■□□ 2.33
SKP2-208ENST00000546211 CDK11AQ9UQ88 783 aaPredicted RBP29.61■■■□□ 2.33
SKP2-208ENST00000546211 UACAQ9BZF9 1416 aa29.61■■■□□ 2.33
SKP2-208ENST00000546211 RRBP1Q9P2E9 1410 aaKnown RBP29.61■■■□□ 2.33
SKP2-208ENST00000546211 SUPT6HQ7KZ85 1726 aaKnown RBP29.6■■■□□ 2.33
SKP2-208ENST00000546211 PHLDB1Q86UU1 1377 aa29.59■■■□□ 2.33
SKP2-208ENST00000546211 NCOA2Q15596 1464 aa29.56■■■□□ 2.32
SKP2-208ENST00000546211 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
SKP2-208ENST00000546211 ATP10BO94823 1461 aa29.52■■■□□ 2.32
SKP2-208ENST00000546211 ABCC2Q92887 1545 aa29.52■■■□□ 2.32
SKP2-208ENST00000546211 ARHGEF11O15085 1522 aa29.49■■■□□ 2.31
SKP2-208ENST00000546211 TROQ12816 1431 aaPredicted RBP29.48■■■□□ 2.31
SKP2-208ENST00000546211 UHRF1BP1LA0JNW5 1464 aa29.46■■■□□ 2.31
SKP2-208ENST00000546211 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
SKP2-208ENST00000546211 PLEKHD1A6NEE1 506 aa29.43■■■□□ 2.3
SKP2-208ENST00000546211 FGD6Q6ZV73 1430 aa29.41■■■□□ 2.3
SKP2-208ENST00000546211 ADCY10Q96PN6 1610 aa29.38■■■□□ 2.29
SKP2-208ENST00000546211 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
SKP2-208ENST00000546211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.36■■■□□ 2.29
SKP2-208ENST00000546211 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
SKP2-208ENST00000546211 KIF14Q15058 1648 aa29.32■■■□□ 2.28
SKP2-208ENST00000546211 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
SKP2-208ENST00000546211 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
SKP2-208ENST00000546211 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
SKP2-208ENST00000546211 ITGAEP38570 1179 aa29.27■■■□□ 2.28
SKP2-208ENST00000546211 TCOF1Q13428 1488 aaKnown RBP29.24■■■□□ 2.27
SKP2-208ENST00000546211 ITSN2Q9NZM3 1697 aa29.23■■■□□ 2.27
SKP2-208ENST00000546211 ABCC10Q5T3U5 1492 aa29.21■■■□□ 2.27
SKP2-208ENST00000546211 GPATCH8Q9UKJ3 1502 aaKnown RBP29.18■■■□□ 2.26
SKP2-208ENST00000546211 CFDP1Q9UEE9 299 aaPredicted RBP29.14■■■□□ 2.26
SKP2-208ENST00000546211 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
SKP2-208ENST00000546211 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
SKP2-208ENST00000546211 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
SKP2-208ENST00000546211 NPM1P06748 294 aaKnown RBP eCLIP29.13■■■□□ 2.25
SKP2-208ENST00000546211 HRCP23327 699 aa29.12■■■□□ 2.25
SKP2-208ENST00000546211 CDC42BPAQ5VT25 1732 aa29.11■■■□□ 2.25
SKP2-208ENST00000546211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.08■■■□□ 2.25
SKP2-208ENST00000546211 KCNH8Q96L42 1107 aa29.08■■■□□ 2.25
SKP2-208ENST00000546211 WDR7Q9Y4E6 1490 aa29.07■■■□□ 2.24
SKP2-208ENST00000546211 CAMSAP2Q08AD1 1489 aa29.05■■■□□ 2.24
SKP2-208ENST00000546211 CCER1Q8TC90 406 aaPredicted RBP29.05■■■□□ 2.24
SKP2-208ENST00000546211 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
SKP2-208ENST00000546211 PREX2Q70Z35 1606 aa29.03■■■□□ 2.24
SKP2-208ENST00000546211 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
SKP2-208ENST00000546211 PTPRKQ15262 1439 aa29.02■■■□□ 2.24
SKP2-208ENST00000546211 ZNF777Q9ULD5 760 aaPredicted RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms