RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
TMEM258-208ENST00000545210 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.9
TMEM258-208ENST00000545210 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
TMEM258-208ENST00000545210 FAM69CQ0P6D2 419 aa20.63■□□□□ 0.89
TMEM258-208ENST00000545210 DIP2BQ9P265 1576 aa20.63■□□□□ 0.89
TMEM258-208ENST00000545210 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
TMEM258-208ENST00000545210 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
TMEM258-208ENST00000545210 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM258-208ENST00000545210 KDM6BO15054 1643 aa20.56■□□□□ 0.88
TMEM258-208ENST00000545210 CUL7Q14999 1698 aa20.51■□□□□ 0.87
TMEM258-208ENST00000545210 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
TMEM258-208ENST00000545210 IGF1RP08069 1367 aa20.44■□□□□ 0.86
TMEM258-208ENST00000545210 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
TMEM258-208ENST00000545210 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
TMEM258-208ENST00000545210 PTPRGP23470 1445 aa20.37■□□□□ 0.85
TMEM258-208ENST00000545210 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
TMEM258-208ENST00000545210 PPRC1Q5VV67 1664 aaKnown RBP20.37■□□□□ 0.85
TMEM258-208ENST00000545210 ABCC2Q92887 1545 aa20.33■□□□□ 0.85
TMEM258-208ENST00000545210 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
TMEM258-208ENST00000545210 CARMIL2Q6F5E8 1435 aa20.31■□□□□ 0.84
TMEM258-208ENST00000545210 ASXL2Q76L83 1435 aa20.3■□□□□ 0.84
TMEM258-208ENST00000545210 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
TMEM258-208ENST00000545210 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
TMEM258-208ENST00000545210 GLI2P10070 1586 aa20.29■□□□□ 0.84
TMEM258-208ENST00000545210 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
TMEM258-208ENST00000545210 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
TMEM258-208ENST00000545210 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
TMEM258-208ENST00000545210 ADGRL1O94910 1474 aa20.23■□□□□ 0.83
TMEM258-208ENST00000545210 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
TMEM258-208ENST00000545210 UACAQ9BZF9 1416 aa20.21■□□□□ 0.83
TMEM258-208ENST00000545210 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
TMEM258-208ENST00000545210 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
TMEM258-208ENST00000545210 EPRSP07814 1512 aaKnown RBP20.17■□□□□ 0.82
TMEM258-208ENST00000545210 ILDR1Q86SU0 546 aaPredicted RBP20.17■□□□□ 0.82
TMEM258-208ENST00000545210 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
TMEM258-208ENST00000545210 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
TMEM258-208ENST00000545210 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
TMEM258-208ENST00000545210 TEX14Q8IWB6 1497 aa20.12■□□□□ 0.81
TMEM258-208ENST00000545210 HECW2Q9P2P5 1572 aa20.09■□□□□ 0.81
TMEM258-208ENST00000545210 RAPGEF2Q9Y4G8 1499 aa20.09■□□□□ 0.81
TMEM258-208ENST00000545210 CTTNBP2Q8WZ74 1663 aa20.08■□□□□ 0.81
TMEM258-208ENST00000545210 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
TMEM258-208ENST00000545210 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
TMEM258-208ENST00000545210 ABCA8O94911 1581 aa19.95■□□□□ 0.78
TMEM258-208ENST00000545210 KIF21BO75037 1637 aa19.95■□□□□ 0.78
TMEM258-208ENST00000545210 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
TMEM258-208ENST00000545210 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
TMEM258-208ENST00000545210 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
TMEM258-208ENST00000545210 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
TMEM258-208ENST00000545210 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
TMEM258-208ENST00000545210 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
TMEM258-208ENST00000545210 ABCA9Q8IUA7 1624 aa19.79■□□□□ 0.76
TMEM258-208ENST00000545210 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
TMEM258-208ENST00000545210 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
TMEM258-208ENST00000545210 ATP10BO94823 1461 aa19.76■□□□□ 0.75
TMEM258-208ENST00000545210 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
TMEM258-208ENST00000545210 PTPRMP28827 1452 aa19.72■□□□□ 0.75
TMEM258-208ENST00000545210 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
TMEM258-208ENST00000545210 RAPGEF6Q8TEU7 1601 aa19.71■□□□□ 0.75
TMEM258-208ENST00000545210 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
TMEM258-208ENST00000545210 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
TMEM258-208ENST00000545210 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
TMEM258-208ENST00000545210 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
TMEM258-208ENST00000545210 PHLDB1Q86UU1 1377 aa19.69■□□□□ 0.74
TMEM258-208ENST00000545210 MADDQ8WXG6 1647 aa19.67■□□□□ 0.74
TMEM258-208ENST00000545210 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
TMEM258-208ENST00000545210 NEO1Q92859 1461 aa19.66■□□□□ 0.74
TMEM258-208ENST00000545210 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
TMEM258-208ENST00000545210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
TMEM258-208ENST00000545210 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
TMEM258-208ENST00000545210 RICTORQ6R327 1708 aa19.62■□□□□ 0.73
TMEM258-208ENST00000545210 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
TMEM258-208ENST00000545210 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
TMEM258-208ENST00000545210 ARHGEF40Q8TER5 1519 aa19.59■□□□□ 0.73
TMEM258-208ENST00000545210 NUP153P49790 1475 aaKnown RBP19.59■□□□□ 0.73
TMEM258-208ENST00000545210 LMTK3Q96Q04 1460 aa19.58■□□□□ 0.72
TMEM258-208ENST00000545210 CFAP74Q9C0B2 1584 aa19.54■□□□□ 0.72
TMEM258-208ENST00000545210 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
TMEM258-208ENST00000545210 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
TMEM258-208ENST00000545210 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
TMEM258-208ENST00000545210 DENND4BO75064 1496 aaPredicted RBP19.52■□□□□ 0.72
TMEM258-208ENST00000545210 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
TMEM258-208ENST00000545210 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
TMEM258-208ENST00000545210 FANCAO15360 1455 aa19.5■□□□□ 0.71
TMEM258-208ENST00000545210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.711e-9■■■■■ 62
TMEM258-208ENST00000545210 AKNAQ7Z591 1439 aa19.5■□□□□ 0.71
TMEM258-208ENST00000545210 FER1L4A9Z1Z3 1794 aa19.48■□□□□ 0.71
TMEM258-208ENST00000545210 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
TMEM258-208ENST00000545210 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
TMEM258-208ENST00000545210 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
TMEM258-208ENST00000545210 ZFYVE16Q7Z3T8 1539 aa19.46■□□□□ 0.71
TMEM258-208ENST00000545210 HSPA2P54652 639 aa19.45■□□□□ 0.7
TMEM258-208ENST00000545210 EFCAB5A4FU69 1503 aa19.45■□□□□ 0.7
TMEM258-208ENST00000545210 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
TMEM258-208ENST00000545210 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
TMEM258-208ENST00000545210 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
TMEM258-208ENST00000545210 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
TMEM258-208ENST00000545210 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
TMEM258-208ENST00000545210 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
TMEM258-208ENST00000545210 EEA1Q15075 1411 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms