RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
TMEM258-208ENST00000545210 ABCC9O60706 1549 aa26.84■■□□□ 1.89
TMEM258-208ENST00000545210 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
TMEM258-208ENST00000545210 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
TMEM258-208ENST00000545210 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
TMEM258-208ENST00000545210 NACADO15069 1562 aa25.14■■□□□ 1.61
TMEM258-208ENST00000545210 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
TMEM258-208ENST00000545210 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
TMEM258-208ENST00000545210 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
TMEM258-208ENST00000545210 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
TMEM258-208ENST00000545210 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
TMEM258-208ENST00000545210 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
TMEM258-208ENST00000545210 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
TMEM258-208ENST00000545210 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
TMEM258-208ENST00000545210 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
TMEM258-208ENST00000545210 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
TMEM258-208ENST00000545210 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
TMEM258-208ENST00000545210 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
TMEM258-208ENST00000545210 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
TMEM258-208ENST00000545210 CUX2O14529 1486 aa23.24■■□□□ 1.31
TMEM258-208ENST00000545210 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
TMEM258-208ENST00000545210 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
TMEM258-208ENST00000545210 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
TMEM258-208ENST00000545210 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
TMEM258-208ENST00000545210 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
TMEM258-208ENST00000545210 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
TMEM258-208ENST00000545210 NESP48681 1621 aa22.98■■□□□ 1.27
TMEM258-208ENST00000545210 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
TMEM258-208ENST00000545210 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
TMEM258-208ENST00000545210 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
TMEM258-208ENST00000545210 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
TMEM258-208ENST00000545210 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
TMEM258-208ENST00000545210 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
TMEM258-208ENST00000545210 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
TMEM258-208ENST00000545210 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
TMEM258-208ENST00000545210 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
TMEM258-208ENST00000545210 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
TMEM258-208ENST00000545210 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
TMEM258-208ENST00000545210 WIZO95785 1651 aa22.42■■□□□ 1.18
TMEM258-208ENST00000545210 WDR62O43379 1518 aa22.41■■□□□ 1.18
TMEM258-208ENST00000545210 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
TMEM258-208ENST00000545210 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
TMEM258-208ENST00000545210 CFTRP13569 1480 aa22.14■■□□□ 1.13
TMEM258-208ENST00000545210 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
TMEM258-208ENST00000545210 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
TMEM258-208ENST00000545210 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
TMEM258-208ENST00000545210 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
TMEM258-208ENST00000545210 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
TMEM258-208ENST00000545210 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
TMEM258-208ENST00000545210 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
TMEM258-208ENST00000545210 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
TMEM258-208ENST00000545210 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
TMEM258-208ENST00000545210 IFT140Q96RY7 1462 aa21.83■■□□□ 1.08
TMEM258-208ENST00000545210 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
TMEM258-208ENST00000545210 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
TMEM258-208ENST00000545210 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
TMEM258-208ENST00000545210 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
TMEM258-208ENST00000545210 CHD1O14646 1710 aa21.74■■□□□ 1.07
TMEM258-208ENST00000545210 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
TMEM258-208ENST00000545210 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
TMEM258-208ENST00000545210 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
TMEM258-208ENST00000545210 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
TMEM258-208ENST00000545210 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.051e-6■■■■□ 24.7
TMEM258-208ENST00000545210 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
TMEM258-208ENST00000545210 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
TMEM258-208ENST00000545210 FBLN2P98095 1184 aa21.53■■□□□ 1.04
TMEM258-208ENST00000545210 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
TMEM258-208ENST00000545210 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
TMEM258-208ENST00000545210 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
TMEM258-208ENST00000545210 SOGA1O94964 1423 aa21.41■■□□□ 1.02
TMEM258-208ENST00000545210 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
TMEM258-208ENST00000545210 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
TMEM258-208ENST00000545210 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
TMEM258-208ENST00000545210 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
TMEM258-208ENST00000545210 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
TMEM258-208ENST00000545210 CUX1P39880 1505 aa21.3■■□□□ 1
TMEM258-208ENST00000545210 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
TMEM258-208ENST00000545210 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
TMEM258-208ENST00000545210 PBRM1Q86U86 1689 aa21.28■■□□□ 1
TMEM258-208ENST00000545210 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
TMEM258-208ENST00000545210 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
TMEM258-208ENST00000545210 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
TMEM258-208ENST00000545210 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
TMEM258-208ENST00000545210 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
TMEM258-208ENST00000545210 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
TMEM258-208ENST00000545210 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
TMEM258-208ENST00000545210 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
TMEM258-208ENST00000545210 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
TMEM258-208ENST00000545210 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
TMEM258-208ENST00000545210 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
TMEM258-208ENST00000545210 NUP160Q12769 1436 aa20.92■□□□□ 0.94
TMEM258-208ENST00000545210 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.949e-6■■■■■ 50.1
TMEM258-208ENST00000545210 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
TMEM258-208ENST00000545210 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
TMEM258-208ENST00000545210 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
TMEM258-208ENST00000545210 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
TMEM258-208ENST00000545210 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
TMEM258-208ENST00000545210 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
TMEM258-208ENST00000545210 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
TMEM258-208ENST00000545210 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms