RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 PRXQ9BXM0 1461 aa32.3■■■□□ 2.76
SDR39U1-203ENST00000544691 CSRNP3Q8WYN3 585 aa32.3■■■□□ 2.76
SDR39U1-203ENST00000544691 KIAA0586Q9BVV6 1533 aa32.22■■■□□ 2.75
SDR39U1-203ENST00000544691 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
SDR39U1-203ENST00000544691 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
SDR39U1-203ENST00000544691 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
SDR39U1-203ENST00000544691 ARAP1Q96P48 1450 aa32.15■■■□□ 2.74
SDR39U1-203ENST00000544691 PRG4Q92954 1404 aaPredicted RBP32.11■■■□□ 2.73
SDR39U1-203ENST00000544691 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
SDR39U1-203ENST00000544691 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
SDR39U1-203ENST00000544691 CTTNBP2Q8WZ74 1663 aa32.01■■■□□ 2.72
SDR39U1-203ENST00000544691 KIF21BO75037 1637 aa32.01■■■□□ 2.71
SDR39U1-203ENST00000544691 EHMT2Q96KQ7 1210 aa31.92■■■□□ 2.7
SDR39U1-203ENST00000544691 UGGT2Q9NYU1 1516 aa31.91■■■□□ 2.7
SDR39U1-203ENST00000544691 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
SDR39U1-203ENST00000544691 CARMIL2Q6F5E8 1435 aa31.85■■■□□ 2.69
SDR39U1-203ENST00000544691 GOLGA3Q08378 1498 aa31.84■■■□□ 2.69
SDR39U1-203ENST00000544691 KIAA0556O60303 1618 aa31.79■■■□□ 2.68
SDR39U1-203ENST00000544691 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
SDR39U1-203ENST00000544691 TTBK1Q5TCY1 1321 aaPredicted RBP31.75■■■□□ 2.67
SDR39U1-203ENST00000544691 UBTFP17480 764 aaKnown RBP31.75■■■□□ 2.67
SDR39U1-203ENST00000544691 PTPRGP23470 1445 aa31.73■■■□□ 2.67
SDR39U1-203ENST00000544691 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.66
SDR39U1-203ENST00000544691 SAMD9Q5K651 1589 aa31.63■■■□□ 2.65
SDR39U1-203ENST00000544691 P3H3Q8IVL6 736 aa31.63■■■□□ 2.65
SDR39U1-203ENST00000544691 ADCY10Q96PN6 1610 aa31.61■■■□□ 2.65
SDR39U1-203ENST00000544691 UACAQ9BZF9 1416 aa31.52■■■□□ 2.64
SDR39U1-203ENST00000544691 FHOD3Q2V2M9 1422 aa31.5■■■□□ 2.63
SDR39U1-203ENST00000544691 EFCAB5A4FU69 1503 aa31.5■■■□□ 2.63
SDR39U1-203ENST00000544691 PLB1Q6P1J6 1458 aa31.5■■■□□ 2.63
SDR39U1-203ENST00000544691 ABCC2Q92887 1545 aa31.48■■■□□ 2.63
SDR39U1-203ENST00000544691 UHRF1BP1LA0JNW5 1464 aa31.47■■■□□ 2.63
SDR39U1-203ENST00000544691 ARHGAP35Q9NRY4 1499 aa31.44■■■□□ 2.62
SDR39U1-203ENST00000544691 ABCA8O94911 1581 aa31.42■■■□□ 2.62
SDR39U1-203ENST00000544691 NPM1P06748 294 aaKnown RBP eCLIP31.41■■■□□ 2.62
SDR39U1-203ENST00000544691 LOC105371045A0A1W2PR82 267 aa31.4■■■□□ 2.62
SDR39U1-203ENST00000544691 TRHP20396 242 aaPredicted RBP31.35■■■□□ 2.61
SDR39U1-203ENST00000544691 KDM5BQ9UGL1 1544 aa31.34■■■□□ 2.61
SDR39U1-203ENST00000544691 MAPKBP1O60336 1514 aa31.33■■■□□ 2.61
SDR39U1-203ENST00000544691 CLIP1P30622 1438 aa31.29■■■□□ 2.6
SDR39U1-203ENST00000544691 ZCCHC11Q5TAX3 1644 aaKnown RBP31.28■■■□□ 2.6
SDR39U1-203ENST00000544691 RAPGEF6Q8TEU7 1601 aa31.28■■■□□ 2.6
SDR39U1-203ENST00000544691 ARID3CA6NKF2 412 aa31.24■■■□□ 2.59
SDR39U1-203ENST00000544691 ASXL2Q76L83 1435 aa31.22■■■□□ 2.59
SDR39U1-203ENST00000544691 FMN1Q68DA7 1419 aa31.22■■■□□ 2.59
SDR39U1-203ENST00000544691 NUP153P49790 1475 aaKnown RBP31.21■■■□□ 2.59
SDR39U1-203ENST00000544691 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
SDR39U1-203ENST00000544691 ATP10BO94823 1461 aa31.18■■■□□ 2.58
SDR39U1-203ENST00000544691 ABCC10Q5T3U5 1492 aa31.17■■■□□ 2.58
SDR39U1-203ENST00000544691 DIP2BQ9P265 1576 aa31.15■■■□□ 2.58
SDR39U1-203ENST00000544691 KIF13AQ9H1H9 1805 aa31.14■■■□□ 2.58
SDR39U1-203ENST00000544691 FAM69CQ0P6D2 419 aa31.11■■■□□ 2.57
SDR39U1-203ENST00000544691 WDR7Q9Y4E6 1490 aa31.09■■■□□ 2.57
SDR39U1-203ENST00000544691 ATP1B4Q9UN42 357 aaPredicted RBP31.07■■■□□ 2.56
SDR39U1-203ENST00000544691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.06■■■□□ 2.56
SDR39U1-203ENST00000544691 HNRNPUL2Q1KMD3 747 aaKnown RBP31.06■■■□□ 2.56
SDR39U1-203ENST00000544691 HECW1Q76N89 1606 aa31.05■■■□□ 2.56
SDR39U1-203ENST00000544691 PCF11O94913 1555 aaKnown RBP31.05■■■□□ 2.56
SDR39U1-203ENST00000544691 EPRSP07814 1512 aaKnown RBP31.04■■■□□ 2.56
SDR39U1-203ENST00000544691 CDK13Q14004 1512 aaKnown RBP31.03■■■□□ 2.56
SDR39U1-203ENST00000544691 CASKIN1Q8WXD9 1431 aa31.01■■■□□ 2.55
SDR39U1-203ENST00000544691 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
SDR39U1-203ENST00000544691 GLI2P10070 1586 aa30.96■■■□□ 2.55
SDR39U1-203ENST00000544691 LRRIQ1Q96JM4 1722 aa30.95■■■□□ 2.54
SDR39U1-203ENST00000544691 FYCO1Q9BQS8 1478 aa30.94■■■□□ 2.54
SDR39U1-203ENST00000544691 PLEKHD1A6NEE1 506 aa30.88■■■□□ 2.53
SDR39U1-203ENST00000544691 TSPOAP1O95153 1857 aa30.87■■■□□ 2.53
SDR39U1-203ENST00000544691 MAP3K4Q9Y6R4 1608 aa30.86■■■□□ 2.53
SDR39U1-203ENST00000544691 CCDC18Q5T9S5 1454 aa30.84■■■□□ 2.53
SDR39U1-203ENST00000544691 VPS8Q8N3P4 1428 aa30.81■■■□□ 2.52
SDR39U1-203ENST00000544691 PPRC1Q5VV67 1664 aaKnown RBP30.8■■■□□ 2.52
SDR39U1-203ENST00000544691 CFAP43Q8NDM7 1665 aa30.78■■■□□ 2.52
SDR39U1-203ENST00000544691 CDK11AQ9UQ88 783 aaPredicted RBP30.78■■■□□ 2.52
SDR39U1-203ENST00000544691 CD109Q6YHK3 1445 aa30.78■■■□□ 2.52
SDR39U1-203ENST00000544691 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
SDR39U1-203ENST00000544691 TROQ12816 1431 aaPredicted RBP30.74■■■□□ 2.51
SDR39U1-203ENST00000544691 MAGI3Q5TCQ9 1506 aa30.74■■■□□ 2.51
SDR39U1-203ENST00000544691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.51
SDR39U1-203ENST00000544691 KIF14Q15058 1648 aa30.69■■■□□ 2.5
SDR39U1-203ENST00000544691 TTC37Q6PGP7 1564 aa30.69■■■□□ 2.5
SDR39U1-203ENST00000544691 TEX14Q8IWB6 1497 aa30.66■■■□□ 2.5
SDR39U1-203ENST00000544691 KDM6BO15054 1643 aa30.58■■■□□ 2.49
SDR39U1-203ENST00000544691 TIAM1Q13009 1591 aa30.57■■■□□ 2.48
SDR39U1-203ENST00000544691 MTUS2Q5JR59 1369 aa30.57■■■□□ 2.48
SDR39U1-203ENST00000544691 COL17A1Q9UMD9 1497 aaPredicted RBP30.56■■■□□ 2.48
SDR39U1-203ENST00000544691 PLCH2O75038 1416 aa30.51■■■□□ 2.48
SDR39U1-203ENST00000544691 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
SDR39U1-203ENST00000544691 FANCAO15360 1455 aa30.49■■■□□ 2.47
SDR39U1-203ENST00000544691 MYO5CQ9NQX4 1742 aa30.49■■■□□ 2.47
SDR39U1-203ENST00000544691 NEO1Q92859 1461 aa30.48■■■□□ 2.47
SDR39U1-203ENST00000544691 MAP3K1Q13233 1512 aa30.47■■■□□ 2.47
SDR39U1-203ENST00000544691 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
SDR39U1-203ENST00000544691 LRRC9Q6ZRR7 1453 aa30.44■■■□□ 2.46
SDR39U1-203ENST00000544691 ARAP3Q8WWN8 1544 aa30.43■■■□□ 2.46
SDR39U1-203ENST00000544691 PHLDB1Q86UU1 1377 aa30.41■■■□□ 2.46
SDR39U1-203ENST00000544691 AKNAQ7Z591 1439 aa30.41■■■□□ 2.46
SDR39U1-203ENST00000544691 ARHGAP5Q13017 1502 aa30.41■■■□□ 2.46
SDR39U1-203ENST00000544691 CFAP74Q9C0B2 1584 aa30.4■■■□□ 2.46
SDR39U1-203ENST00000544691 PREX2Q70Z35 1606 aa30.4■■■□□ 2.46
SDR39U1-203ENST00000544691 CDC42BPAQ5VT25 1732 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms