RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 NISCHQ9Y2I1 1504 aa46.66■■■■■ 5.06
SDR39U1-203ENST00000544691 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
SDR39U1-203ENST00000544691 ABCC9O60706 1549 aa40.35■■■■■ 4.05
SDR39U1-203ENST00000544691 DCAF8L2P0C7V8 631 aa38.94■■■■□ 3.82
SDR39U1-203ENST00000544691 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
SDR39U1-203ENST00000544691 NACADO15069 1562 aa38.82■■■■□ 3.81
SDR39U1-203ENST00000544691 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.81
SDR39U1-203ENST00000544691 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.78
SDR39U1-203ENST00000544691 DCAF1Q9Y4B6 1507 aa38.56■■■■□ 3.76
SDR39U1-203ENST00000544691 UNC13AQ9UPW8 1703 aa37.99■■■■□ 3.67
SDR39U1-203ENST00000544691 SCRIBQ14160 1630 aa37.82■■■■□ 3.65
SDR39U1-203ENST00000544691 PABPN1Q86U42 306 aaKnown RBP eCLIP37.76■■■■□ 3.632e-8■□□□□ 11.2
SDR39U1-203ENST00000544691 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
SDR39U1-203ENST00000544691 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
SDR39U1-203ENST00000544691 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
SDR39U1-203ENST00000544691 EIF4G1Q04637 1599 aaKnown RBP36.68■■■■□ 3.46
SDR39U1-203ENST00000544691 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
SDR39U1-203ENST00000544691 CECR2Q9BXF3 1484 aa36.38■■■■□ 3.41
SDR39U1-203ENST00000544691 SMARCA4P51532 1647 aa36.16■■■■□ 3.38
SDR39U1-203ENST00000544691 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
SDR39U1-203ENST00000544691 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
SDR39U1-203ENST00000544691 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
SDR39U1-203ENST00000544691 NCAPD3P42695 1498 aa35.85■■■■□ 3.33
SDR39U1-203ENST00000544691 SMARCA2P51531 1590 aa35.84■■■■□ 3.33
SDR39U1-203ENST00000544691 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
SDR39U1-203ENST00000544691 HMGXB3Q12766 1538 aa35.68■■■■□ 3.3
SDR39U1-203ENST00000544691 RSF1Q96T23 1441 aaPredicted RBP35.65■■■■□ 3.3
SDR39U1-203ENST00000544691 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
SDR39U1-203ENST00000544691 WIZO95785 1651 aa35.62■■■■□ 3.29
SDR39U1-203ENST00000544691 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
SDR39U1-203ENST00000544691 NESP48681 1621 aa35■■■■□ 3.19
SDR39U1-203ENST00000544691 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
SDR39U1-203ENST00000544691 LAMC3Q9Y6N6 1575 aa34.85■■■■□ 3.17
SDR39U1-203ENST00000544691 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
SDR39U1-203ENST00000544691 CADPSQ9ULU8 1353 aa34.82■■■■□ 3.17
SDR39U1-203ENST00000544691 ERCC6Q03468 1493 aa34.73■■■■□ 3.15
SDR39U1-203ENST00000544691 CFTRP13569 1480 aa34.67■■■■□ 3.14
SDR39U1-203ENST00000544691 PDS5BQ9NTI5 1447 aa34.61■■■■□ 3.13
SDR39U1-203ENST00000544691 KIF21AQ7Z4S6 1674 aa34.54■■■■□ 3.12
SDR39U1-203ENST00000544691 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
SDR39U1-203ENST00000544691 THOC2Q8NI27 1593 aaKnown RBP34.38■■■■□ 3.09
SDR39U1-203ENST00000544691 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
SDR39U1-203ENST00000544691 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
SDR39U1-203ENST00000544691 MRC2Q9UBG0 1479 aa34.26■■■■□ 3.08
SDR39U1-203ENST00000544691 CUX2O14529 1486 aa34.24■■■■□ 3.07
SDR39U1-203ENST00000544691 WDR62O43379 1518 aa34.15■■■■□ 3.06
SDR39U1-203ENST00000544691 URB2Q14146 1524 aaKnown RBP34.1■■■■□ 3.05
SDR39U1-203ENST00000544691 TOPBP1Q92547 1522 aa33.92■■■■□ 3.02
SDR39U1-203ENST00000544691 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
SDR39U1-203ENST00000544691 ABCC8Q09428 1581 aa33.84■■■■□ 3.01
SDR39U1-203ENST00000544691 CUX1P39880 1505 aa33.76■■■□□ 2.99
SDR39U1-203ENST00000544691 POLA1P09884 1462 aaPredicted RBP33.65■■■□□ 2.98
SDR39U1-203ENST00000544691 IFT140Q96RY7 1462 aa33.61■■■□□ 2.97
SDR39U1-203ENST00000544691 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
SDR39U1-203ENST00000544691 WRNQ14191 1432 aaPredicted RBP eCLIP33.6■■■□□ 2.97
SDR39U1-203ENST00000544691 SYNJ1O43426 1573 aa33.53■■■□□ 2.96
SDR39U1-203ENST00000544691 RAD54L2Q9Y4B4 1467 aa33.53■■■□□ 2.96
SDR39U1-203ENST00000544691 TARBP1Q13395 1621 aaKnown RBP33.52■■■□□ 2.96
SDR39U1-203ENST00000544691 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
SDR39U1-203ENST00000544691 SOGA1O94964 1423 aa33.49■■■□□ 2.95
SDR39U1-203ENST00000544691 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
SDR39U1-203ENST00000544691 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
SDR39U1-203ENST00000544691 EIF4G3O43432 1585 aaKnown RBP33.37■■■□□ 2.93
SDR39U1-203ENST00000544691 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.93
SDR39U1-203ENST00000544691 TDRD9Q8NDG6 1382 aaKnown RBP33.32■■■□□ 2.92
SDR39U1-203ENST00000544691 WDR97A6NE52 1622 aa33.29■■■□□ 2.92
SDR39U1-203ENST00000544691 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.91
SDR39U1-203ENST00000544691 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
SDR39U1-203ENST00000544691 GAPVD1Q14C86 1478 aa33.11■■■□□ 2.89
SDR39U1-203ENST00000544691 GRIN2BQ13224 1484 aa33.06■■■□□ 2.88
SDR39U1-203ENST00000544691 SNAPC4Q5SXM2 1469 aa33.03■■■□□ 2.88
SDR39U1-203ENST00000544691 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
SDR39U1-203ENST00000544691 DNAJC5Q9H3Z4 198 aa32.98■■■□□ 2.87
SDR39U1-203ENST00000544691 MAGI1Q96QZ7 1491 aaPredicted RBP32.95■■■□□ 2.86
SDR39U1-203ENST00000544691 TRIM41Q8WV44 630 aa32.94■■■□□ 2.86
SDR39U1-203ENST00000544691 FBLN2P98095 1184 aa32.9■■■□□ 2.86
SDR39U1-203ENST00000544691 CHD1O14646 1710 aa32.89■■■□□ 2.86
SDR39U1-203ENST00000544691 OSCARQ8IYS5 282 aa32.88■■■□□ 2.85
SDR39U1-203ENST00000544691 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
SDR39U1-203ENST00000544691 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
SDR39U1-203ENST00000544691 SYNJ2O15056 1496 aa32.83■■■□□ 2.85
SDR39U1-203ENST00000544691 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
SDR39U1-203ENST00000544691 ADAMTS12P58397 1594 aa32.78■■■□□ 2.84
SDR39U1-203ENST00000544691 FHAD1B1AJZ9 1412 aa32.72■■■□□ 2.83
SDR39U1-203ENST00000544691 IGF1RP08069 1367 aa32.72■■■□□ 2.83
SDR39U1-203ENST00000544691 CHIC1Q5VXU3 224 aa32.71■■■□□ 2.83
SDR39U1-203ENST00000544691 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
SDR39U1-203ENST00000544691 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
SDR39U1-203ENST00000544691 CUL7Q14999 1698 aa32.58■■■□□ 2.81
SDR39U1-203ENST00000544691 CLASP1Q7Z460 1538 aa32.55■■■□□ 2.8
SDR39U1-203ENST00000544691 CARMIL1Q5VZK9 1371 aa32.52■■■□□ 2.8
SDR39U1-203ENST00000544691 CEP170Q5SW79 1584 aa32.51■■■□□ 2.79
SDR39U1-203ENST00000544691 NUP160Q12769 1436 aa32.5■■■□□ 2.79
SDR39U1-203ENST00000544691 ARHGEF11O15085 1522 aa32.38■■■□□ 2.77
SDR39U1-203ENST00000544691 RIMBP3CA6NJZ7 1639 aa32.35■■■□□ 2.77
SDR39U1-203ENST00000544691 RIMBP3BA6NNM3 1639 aa32.35■■■□□ 2.77
SDR39U1-203ENST00000544691 RIMBP3Q9UFD9 1639 aa32.35■■■□□ 2.77
SDR39U1-203ENST00000544691 RAPGEF2Q9Y4G8 1499 aa32.34■■■□□ 2.77
SDR39U1-203ENST00000544691 EEA1Q15075 1411 aa32.32■■■□□ 2.76
SDR39U1-203ENST00000544691 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms