RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
SPDEF-202ENST00000544425 PBRM1Q86U86 1689 aa24.64■■□□□ 1.54
SPDEF-202ENST00000544425 EFCAB5A4FU69 1503 aa24.63■■□□□ 1.53
SPDEF-202ENST00000544425 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
SPDEF-202ENST00000544425 ADAMTS12P58397 1594 aa24.6■■□□□ 1.53
SPDEF-202ENST00000544425 MAP3K1Q13233 1512 aa24.55■■□□□ 1.52
SPDEF-202ENST00000544425 KANK4Q5T7N3 995 aaPredicted RBP24.51■■□□□ 1.51
SPDEF-202ENST00000544425 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
SPDEF-202ENST00000544425 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
SPDEF-202ENST00000544425 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
SPDEF-202ENST00000544425 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
SPDEF-202ENST00000544425 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
SPDEF-202ENST00000544425 SAMD9Q5K651 1589 aa24.47■■□□□ 1.51
SPDEF-202ENST00000544425 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
SPDEF-202ENST00000544425 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
SPDEF-202ENST00000544425 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
SPDEF-202ENST00000544425 FYCO1Q9BQS8 1478 aa24.42■■□□□ 1.5
SPDEF-202ENST00000544425 TIAM1Q13009 1591 aa24.41■■□□□ 1.5
SPDEF-202ENST00000544425 IQGAP2Q13576 1575 aa24.4■■□□□ 1.5
SPDEF-202ENST00000544425 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
SPDEF-202ENST00000544425 KIAA0586Q9BVV6 1533 aa24.38■■□□□ 1.49
SPDEF-202ENST00000544425 PCF11O94913 1555 aaKnown RBP24.38■■□□□ 1.49
SPDEF-202ENST00000544425 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
SPDEF-202ENST00000544425 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
SPDEF-202ENST00000544425 UGGT2Q9NYU1 1516 aa24.34■■□□□ 1.49
SPDEF-202ENST00000544425 CHMP7Q8WUX9 453 aaPredicted RBP24.34■■□□□ 1.49
SPDEF-202ENST00000544425 RRBP1Q9P2E9 1410 aaKnown RBP24.32■■□□□ 1.48
SPDEF-202ENST00000544425 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
SPDEF-202ENST00000544425 CFAP43Q8NDM7 1665 aa24.28■■□□□ 1.48
SPDEF-202ENST00000544425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
SPDEF-202ENST00000544425 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
SPDEF-202ENST00000544425 NUP160Q12769 1436 aa24.23■■□□□ 1.47
SPDEF-202ENST00000544425 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
SPDEF-202ENST00000544425 CCNB3Q8WWL7 1395 aa24.22■■□□□ 1.47
SPDEF-202ENST00000544425 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SPDEF-202ENST00000544425 CEP170Q5SW79 1584 aa24.19■■□□□ 1.46
SPDEF-202ENST00000544425 DISP1Q96F81 1524 aa24.19■■□□□ 1.46
SPDEF-202ENST00000544425 PHLDB1Q86UU1 1377 aa24.14■■□□□ 1.46
SPDEF-202ENST00000544425 KIAA0556O60303 1618 aa24.14■■□□□ 1.45
SPDEF-202ENST00000544425 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
SPDEF-202ENST00000544425 JPH4Q96JJ6 628 aa24.11■■□□□ 1.45
SPDEF-202ENST00000544425 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
SPDEF-202ENST00000544425 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
SPDEF-202ENST00000544425 CARMIL2Q6F5E8 1435 aa24.06■■□□□ 1.44
SPDEF-202ENST00000544425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.44
SPDEF-202ENST00000544425 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
SPDEF-202ENST00000544425 EPRSP07814 1512 aaKnown RBP24.04■■□□□ 1.44
SPDEF-202ENST00000544425 EHBP1L1Q8N3D4 1523 aa24.03■■□□□ 1.44
SPDEF-202ENST00000544425 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
SPDEF-202ENST00000544425 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
SPDEF-202ENST00000544425 ARHGEF11O15085 1522 aa23.95■■□□□ 1.42
SPDEF-202ENST00000544425 MAGI3Q5TCQ9 1506 aa23.95■■□□□ 1.42
SPDEF-202ENST00000544425 NUP153P49790 1475 aaKnown RBP23.94■■□□□ 1.42
SPDEF-202ENST00000544425 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
SPDEF-202ENST00000544425 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
SPDEF-202ENST00000544425 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
SPDEF-202ENST00000544425 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
SPDEF-202ENST00000544425 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
SPDEF-202ENST00000544425 ITGAEP38570 1179 aa23.9■■□□□ 1.42
SPDEF-202ENST00000544425 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.41
SPDEF-202ENST00000544425 CDK11AQ9UQ88 783 aaPredicted RBP23.89■■□□□ 1.41
SPDEF-202ENST00000544425 CHD1O14646 1710 aa23.87■■□□□ 1.41
SPDEF-202ENST00000544425 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
SPDEF-202ENST00000544425 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
SPDEF-202ENST00000544425 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
SPDEF-202ENST00000544425 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
SPDEF-202ENST00000544425 MIA2Q96PC5 1412 aa23.81■■□□□ 1.4
SPDEF-202ENST00000544425 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
SPDEF-202ENST00000544425 ABCA8O94911 1581 aa23.8■■□□□ 1.4
SPDEF-202ENST00000544425 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
SPDEF-202ENST00000544425 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
SPDEF-202ENST00000544425 PTPRGP23470 1445 aa23.79■■□□□ 1.4
SPDEF-202ENST00000544425 TCOF1Q13428 1488 aaKnown RBP23.78■■□□□ 1.4
SPDEF-202ENST00000544425 TROQ12816 1431 aaPredicted RBP23.76■■□□□ 1.39
SPDEF-202ENST00000544425 PTPN23Q9H3S7 1636 aa23.74■■□□□ 1.39
SPDEF-202ENST00000544425 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
SPDEF-202ENST00000544425 ATP10BO94823 1461 aa23.71■■□□□ 1.39
SPDEF-202ENST00000544425 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
SPDEF-202ENST00000544425 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
SPDEF-202ENST00000544425 HFM1A2PYH4 1435 aa23.66■■□□□ 1.38
SPDEF-202ENST00000544425 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
SPDEF-202ENST00000544425 ADCY10Q96PN6 1610 aa23.63■■□□□ 1.37
SPDEF-202ENST00000544425 NAIPQ13075 1403 aa23.58■■□□□ 1.37
SPDEF-202ENST00000544425 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.36
SPDEF-202ENST00000544425 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.36
SPDEF-202ENST00000544425 AKNAQ7Z591 1439 aa23.58■■□□□ 1.36
SPDEF-202ENST00000544425 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
SPDEF-202ENST00000544425 ABCC2Q92887 1545 aa23.53■■□□□ 1.36
SPDEF-202ENST00000544425 ABCC10Q5T3U5 1492 aa23.53■■□□□ 1.36
SPDEF-202ENST00000544425 KIF14Q15058 1648 aa23.53■■□□□ 1.36
SPDEF-202ENST00000544425 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
SPDEF-202ENST00000544425 ROCK1Q13464 1354 aa23.51■■□□□ 1.35
SPDEF-202ENST00000544425 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
SPDEF-202ENST00000544425 DAPK1P53355 1430 aa23.5■■□□□ 1.35
SPDEF-202ENST00000544425 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
SPDEF-202ENST00000544425 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
SPDEF-202ENST00000544425 ABCC5O15440 1437 aa23.5■■□□□ 1.35
SPDEF-202ENST00000544425 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
SPDEF-202ENST00000544425 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
SPDEF-202ENST00000544425 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms