RNA–Protein interactions for RNA: ENST00000544254.1

PSMD9-210, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 1,481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-210ENST00000544254 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
PSMD9-210ENST00000544254 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
PSMD9-210ENST00000544254 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
PSMD9-210ENST00000544254 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
PSMD9-210ENST00000544254 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
PSMD9-210ENST00000544254 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
PSMD9-210ENST00000544254 HRCP23327 699 aa19.86■□□□□ 0.77
PSMD9-210ENST00000544254 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
PSMD9-210ENST00000544254 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.77
PSMD9-210ENST00000544254 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
PSMD9-210ENST00000544254 IQGAP2Q13576 1575 aa19.8■□□□□ 0.76
PSMD9-210ENST00000544254 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
PSMD9-210ENST00000544254 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
PSMD9-210ENST00000544254 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
PSMD9-210ENST00000544254 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
PSMD9-210ENST00000544254 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
PSMD9-210ENST00000544254 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
PSMD9-210ENST00000544254 KIAA0586Q9BVV6 1533 aa19.74■□□□□ 0.75
PSMD9-210ENST00000544254 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
PSMD9-210ENST00000544254 PCF11O94913 1555 aaKnown RBP19.73■□□□□ 0.75
PSMD9-210ENST00000544254 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
PSMD9-210ENST00000544254 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
PSMD9-210ENST00000544254 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
PSMD9-210ENST00000544254 P3H3Q8IVL6 736 aa19.68■□□□□ 0.74
PSMD9-210ENST00000544254 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
PSMD9-210ENST00000544254 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
PSMD9-210ENST00000544254 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
PSMD9-210ENST00000544254 NUP160Q12769 1436 aa19.63■□□□□ 0.73
PSMD9-210ENST00000544254 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
PSMD9-210ENST00000544254 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
PSMD9-210ENST00000544254 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
PSMD9-210ENST00000544254 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.73
PSMD9-210ENST00000544254 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
PSMD9-210ENST00000544254 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
PSMD9-210ENST00000544254 ATP1B4Q9UN42 357 aaPredicted RBP19.54■□□□□ 0.72
PSMD9-210ENST00000544254 FBLN2P98095 1184 aa19.53■□□□□ 0.72
PSMD9-210ENST00000544254 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
PSMD9-210ENST00000544254 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.71
PSMD9-210ENST00000544254 EHBP1L1Q8N3D4 1523 aa19.48■□□□□ 0.71
PSMD9-210ENST00000544254 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
PSMD9-210ENST00000544254 LRRIQ1Q96JM4 1722 aa19.47■□□□□ 0.71
PSMD9-210ENST00000544254 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
PSMD9-210ENST00000544254 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
PSMD9-210ENST00000544254 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
PSMD9-210ENST00000544254 JPH4Q96JJ6 628 aa19.44■□□□□ 0.7
PSMD9-210ENST00000544254 CHD1O14646 1710 aa19.44■□□□□ 0.7
PSMD9-210ENST00000544254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
PSMD9-210ENST00000544254 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
PSMD9-210ENST00000544254 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
PSMD9-210ENST00000544254 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
PSMD9-210ENST00000544254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
PSMD9-210ENST00000544254 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
PSMD9-210ENST00000544254 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
PSMD9-210ENST00000544254 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
PSMD9-210ENST00000544254 SHROOM2Q13796 1616 aa19.34■□□□□ 0.69
PSMD9-210ENST00000544254 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
PSMD9-210ENST00000544254 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
PSMD9-210ENST00000544254 MYOM3Q5VTT5 1437 aa19.33■□□□□ 0.68
PSMD9-210ENST00000544254 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
PSMD9-210ENST00000544254 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
PSMD9-210ENST00000544254 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
PSMD9-210ENST00000544254 ABCA8O94911 1581 aa19.29■□□□□ 0.68
PSMD9-210ENST00000544254 FAM50AQ14320 339 aaKnown RBP19.26■□□□□ 0.67
PSMD9-210ENST00000544254 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
PSMD9-210ENST00000544254 PLB1Q6P1J6 1458 aa19.26■□□□□ 0.67
PSMD9-210ENST00000544254 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
PSMD9-210ENST00000544254 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
PSMD9-210ENST00000544254 PTPRGP23470 1445 aa19.23■□□□□ 0.67
PSMD9-210ENST00000544254 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
PSMD9-210ENST00000544254 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
PSMD9-210ENST00000544254 PTPN23Q9H3S7 1636 aa19.21■□□□□ 0.67
PSMD9-210ENST00000544254 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
PSMD9-210ENST00000544254 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
PSMD9-210ENST00000544254 ITGAEP38570 1179 aa19.18■□□□□ 0.66
PSMD9-210ENST00000544254 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
PSMD9-210ENST00000544254 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
PSMD9-210ENST00000544254 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.65
PSMD9-210ENST00000544254 ATP10BO94823 1461 aa19.14■□□□□ 0.65
PSMD9-210ENST00000544254 RAB3GAP2Q9H2M9 1393 aa19.13■□□□□ 0.65
PSMD9-210ENST00000544254 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
PSMD9-210ENST00000544254 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
PSMD9-210ENST00000544254 KIF14Q15058 1648 aa19.11■□□□□ 0.65
PSMD9-210ENST00000544254 ABCC2Q92887 1545 aa19.09■□□□□ 0.65
PSMD9-210ENST00000544254 HFM1A2PYH4 1435 aa19.09■□□□□ 0.65
PSMD9-210ENST00000544254 AKNAQ7Z591 1439 aa19.09■□□□□ 0.65
PSMD9-210ENST00000544254 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
PSMD9-210ENST00000544254 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
PSMD9-210ENST00000544254 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
PSMD9-210ENST00000544254 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
PSMD9-210ENST00000544254 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
PSMD9-210ENST00000544254 DNMT1P26358 1616 aaKnown RBP19.02■□□□□ 0.64
PSMD9-210ENST00000544254 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.63
PSMD9-210ENST00000544254 GCC2Q8IWJ2 1684 aa19■□□□□ 0.63
PSMD9-210ENST00000544254 ROCK1Q13464 1354 aa19■□□□□ 0.63
PSMD9-210ENST00000544254 NAIPQ13075 1403 aa19■□□□□ 0.63
PSMD9-210ENST00000544254 CFDP1Q9UEE9 299 aaPredicted RBP18.99■□□□□ 0.63
PSMD9-210ENST00000544254 DAPK1P53355 1430 aa18.99■□□□□ 0.63
PSMD9-210ENST00000544254 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
PSMD9-210ENST00000544254 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
PSMD9-210ENST00000544254 KDM5BQ9UGL1 1544 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms