RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FHAD1B1AJZ9 1412 aa31.04■■■□□ 2.56
COPS7A-218ENST00000543939 PPARGC1BQ86YN6 1023 aaKnown RBP30.98■■■□□ 2.55
COPS7A-218ENST00000543939 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
COPS7A-218ENST00000543939 EFCAB5A4FU69 1503 aa30.87■■■□□ 2.53
COPS7A-218ENST00000543939 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
COPS7A-218ENST00000543939 APLP2Q06481 763 aa30.76■■■□□ 2.52
COPS7A-218ENST00000543939 SAMD9Q5K651 1589 aa30.75■■■□□ 2.51
COPS7A-218ENST00000543939 GRIN2AQ12879 1464 aa30.75■■■□□ 2.51
COPS7A-218ENST00000543939 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
COPS7A-218ENST00000543939 IQGAP2Q13576 1575 aa30.72■■■□□ 2.51
COPS7A-218ENST00000543939 FHOD3Q2V2M9 1422 aa30.7■■■□□ 2.5
COPS7A-218ENST00000543939 TTBK1Q5TCY1 1321 aaPredicted RBP30.69■■■□□ 2.5
COPS7A-218ENST00000543939 P3H3Q8IVL6 736 aa30.68■■■□□ 2.5
COPS7A-218ENST00000543939 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
COPS7A-218ENST00000543939 PCF11O94913 1555 aaKnown RBP30.61■■■□□ 2.49
COPS7A-218ENST00000543939 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
COPS7A-218ENST00000543939 MAP3K1Q13233 1512 aa30.59■■■□□ 2.49
COPS7A-218ENST00000543939 UGGT2Q9NYU1 1516 aa30.59■■■□□ 2.49
COPS7A-218ENST00000543939 FMN1Q68DA7 1419 aa30.57■■■□□ 2.48
COPS7A-218ENST00000543939 CEP170Q5SW79 1584 aa30.57■■■□□ 2.48
COPS7A-218ENST00000543939 FYCO1Q9BQS8 1478 aa30.55■■■□□ 2.48
COPS7A-218ENST00000543939 CASKIN1Q8WXD9 1431 aa30.54■■■□□ 2.48
COPS7A-218ENST00000543939 TIAM1Q13009 1591 aa30.54■■■□□ 2.48
COPS7A-218ENST00000543939 NUP160Q12769 1436 aa30.53■■■□□ 2.48
COPS7A-218ENST00000543939 KANK4Q5T7N3 995 aaPredicted RBP30.52■■■□□ 2.48
COPS7A-218ENST00000543939 FBLN2P98095 1184 aa30.5■■■□□ 2.47
COPS7A-218ENST00000543939 CFAP43Q8NDM7 1665 aa30.49■■■□□ 2.47
COPS7A-218ENST00000543939 DISP1Q96F81 1524 aa30.42■■■□□ 2.46
COPS7A-218ENST00000543939 KIAA0556O60303 1618 aa30.42■■■□□ 2.46
COPS7A-218ENST00000543939 CHD1O14646 1710 aa30.41■■■□□ 2.46
COPS7A-218ENST00000543939 LRRC9Q6ZRR7 1453 aa30.38■■■□□ 2.45
COPS7A-218ENST00000543939 LRRIQ1Q96JM4 1722 aa30.35■■■□□ 2.45
COPS7A-218ENST00000543939 HRCP23327 699 aa30.35■■■□□ 2.45
COPS7A-218ENST00000543939 ATP1B4Q9UN42 357 aaPredicted RBP30.35■■■□□ 2.45
COPS7A-218ENST00000543939 JPH4Q96JJ6 628 aa30.27■■■□□ 2.44
COPS7A-218ENST00000543939 HECW1Q76N89 1606 aa30.27■■■□□ 2.44
COPS7A-218ENST00000543939 RRBP1Q9P2E9 1410 aaKnown RBP30.23■■■□□ 2.43
COPS7A-218ENST00000543939 CARMIL2Q6F5E8 1435 aa30.22■■■□□ 2.43
COPS7A-218ENST00000543939 CCDC18Q5T9S5 1454 aa30.21■■■□□ 2.43
COPS7A-218ENST00000543939 RAPGEF6Q8TEU7 1601 aa30.14■■■□□ 2.42
COPS7A-218ENST00000543939 EPRSP07814 1512 aaKnown RBP30.14■■■□□ 2.42
COPS7A-218ENST00000543939 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
COPS7A-218ENST00000543939 PHLDB1Q86UU1 1377 aa30.11■■■□□ 2.41
COPS7A-218ENST00000543939 MTUS2Q5JR59 1369 aa30.1■■■□□ 2.41
COPS7A-218ENST00000543939 CCNB3Q8WWL7 1395 aa30.1■■■□□ 2.41
COPS7A-218ENST00000543939 EHBP1L1Q8N3D4 1523 aa30.09■■■□□ 2.41
COPS7A-218ENST00000543939 PRG4Q92954 1404 aaPredicted RBP30.07■■■□□ 2.4
COPS7A-218ENST00000543939 NUP153P49790 1475 aaKnown RBP30.06■■■□□ 2.4
COPS7A-218ENST00000543939 HNRNPUL2Q1KMD3 747 aaKnown RBP30.06■■■□□ 2.4
COPS7A-218ENST00000543939 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
COPS7A-218ENST00000543939 MAGI3Q5TCQ9 1506 aa30.06■■■□□ 2.4
COPS7A-218ENST00000543939 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
COPS7A-218ENST00000543939 SUPT6HQ7KZ85 1726 aaKnown RBP30.03■■■□□ 2.4
COPS7A-218ENST00000543939 PLB1Q6P1J6 1458 aa30.01■■■□□ 2.39
COPS7A-218ENST00000543939 ABCA8O94911 1581 aa29.98■■■□□ 2.39
COPS7A-218ENST00000543939 NCOA2Q15596 1464 aa29.97■■■□□ 2.39
COPS7A-218ENST00000543939 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
COPS7A-218ENST00000543939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.94■■■□□ 2.38
COPS7A-218ENST00000543939 ZEB1P37275 1124 aaPredicted RBP29.92■■■□□ 2.38
COPS7A-218ENST00000543939 ARID3CA6NKF2 412 aa29.91■■■□□ 2.38
COPS7A-218ENST00000543939 PTPRGP23470 1445 aa29.91■■■□□ 2.38
COPS7A-218ENST00000543939 FGD6Q6ZV73 1430 aa29.89■■■□□ 2.37
COPS7A-218ENST00000543939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.88■■■□□ 2.37
COPS7A-218ENST00000543939 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
COPS7A-218ENST00000543939 MYOM3Q5VTT5 1437 aa29.87■■■□□ 2.37
COPS7A-218ENST00000543939 CCER1Q8TC90 406 aaPredicted RBP29.85■■■□□ 2.37
COPS7A-218ENST00000543939 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
COPS7A-218ENST00000543939 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
COPS7A-218ENST00000543939 TROQ12816 1431 aaPredicted RBP29.77■■■□□ 2.36
COPS7A-218ENST00000543939 ATP10BO94823 1461 aa29.77■■■□□ 2.36
COPS7A-218ENST00000543939 ITGAEP38570 1179 aa29.75■■■□□ 2.35
COPS7A-218ENST00000543939 UACAQ9BZF9 1416 aa29.75■■■□□ 2.35
COPS7A-218ENST00000543939 PTPN23Q9H3S7 1636 aa29.74■■■□□ 2.35
COPS7A-218ENST00000543939 ADCY10Q96PN6 1610 aa29.73■■■□□ 2.35
COPS7A-218ENST00000543939 TCOF1Q13428 1488 aaKnown RBP29.7■■■□□ 2.34
COPS7A-218ENST00000543939 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
COPS7A-218ENST00000543939 ABCC2Q92887 1545 aa29.66■■■□□ 2.34
COPS7A-218ENST00000543939 KIF14Q15058 1648 aa29.65■■■□□ 2.34
COPS7A-218ENST00000543939 PLEKHD1A6NEE1 506 aa29.62■■■□□ 2.33
COPS7A-218ENST00000543939 OSCARQ8IYS5 282 aa29.62■■■□□ 2.33
COPS7A-218ENST00000543939 UHRF1BP1LA0JNW5 1464 aa29.59■■■□□ 2.33
COPS7A-218ENST00000543939 ITSN2Q9NZM3 1697 aa29.58■■■□□ 2.33
COPS7A-218ENST00000543939 SETD5Q9C0A6 1442 aa29.58■■■□□ 2.33
COPS7A-218ENST00000543939 PTPRKQ15262 1439 aa29.56■■■□□ 2.32
COPS7A-218ENST00000543939 RAB3GAP2Q9H2M9 1393 aa29.55■■■□□ 2.32
COPS7A-218ENST00000543939 GPATCH8Q9UKJ3 1502 aaKnown RBP29.53■■■□□ 2.32
COPS7A-218ENST00000543939 ABCC10Q5T3U5 1492 aa29.53■■■□□ 2.32
COPS7A-218ENST00000543939 DHX57Q6P158 1386 aaKnown RBP29.52■■■□□ 2.32
COPS7A-218ENST00000543939 CDC42BPAQ5VT25 1732 aa29.49■■■□□ 2.31
COPS7A-218ENST00000543939 ZCCHC11Q5TAX3 1644 aaKnown RBP29.48■■■□□ 2.31
COPS7A-218ENST00000543939 KDM5BQ9UGL1 1544 aa29.48■■■□□ 2.31
COPS7A-218ENST00000543939 HFM1A2PYH4 1435 aa29.44■■■□□ 2.3
COPS7A-218ENST00000543939 DNMT1P26358 1616 aaKnown RBP29.43■■■□□ 2.3
COPS7A-218ENST00000543939 CLSPNQ9HAW4 1339 aa29.42■■■□□ 2.3
COPS7A-218ENST00000543939 CFDP1Q9UEE9 299 aaPredicted RBP29.42■■■□□ 2.3
COPS7A-218ENST00000543939 CAMSAP2Q08AD1 1489 aa29.41■■■□□ 2.3
COPS7A-218ENST00000543939 ZNF644Q9H582 1327 aaPredicted RBP29.4■■■□□ 2.3
COPS7A-218ENST00000543939 DAPK1P53355 1430 aa29.38■■■□□ 2.29
COPS7A-218ENST00000543939 NAIPQ13075 1403 aa29.38■■■□□ 2.29
COPS7A-218ENST00000543939 AKNAQ7Z591 1439 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms