RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
PRAME-214ENST00000543184 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
PRAME-214ENST00000543184 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
PRAME-214ENST00000543184 EEA1Q15075 1411 aa20.97■□□□□ 0.95
PRAME-214ENST00000543184 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
PRAME-214ENST00000543184 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
PRAME-214ENST00000543184 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
PRAME-214ENST00000543184 APLP2Q06481 763 aa20.95■□□□□ 0.94
PRAME-214ENST00000543184 CLIP1P30622 1438 aa20.95■□□□□ 0.94
PRAME-214ENST00000543184 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
PRAME-214ENST00000543184 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
PRAME-214ENST00000543184 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
PRAME-214ENST00000543184 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
PRAME-214ENST00000543184 MYT1Q01538 1121 aa20.86■□□□□ 0.93
PRAME-214ENST00000543184 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
PRAME-214ENST00000543184 VPS8Q8N3P4 1428 aa20.81■□□□□ 0.92
PRAME-214ENST00000543184 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
PRAME-214ENST00000543184 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
PRAME-214ENST00000543184 ITGAEP38570 1179 aa20.77■□□□□ 0.92
PRAME-214ENST00000543184 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
PRAME-214ENST00000543184 KIF21BO75037 1637 aa20.74■□□□□ 0.91
PRAME-214ENST00000543184 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
PRAME-214ENST00000543184 SUPT16HQ9Y5B9 1047 aaKnown RBP20.71■□□□□ 0.91
PRAME-214ENST00000543184 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
PRAME-214ENST00000543184 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
PRAME-214ENST00000543184 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
PRAME-214ENST00000543184 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
PRAME-214ENST00000543184 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
PRAME-214ENST00000543184 CUL7Q14999 1698 aa20.68■□□□□ 0.9
PRAME-214ENST00000543184 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
PRAME-214ENST00000543184 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
PRAME-214ENST00000543184 BCANQ96GW7 911 aa20.6■□□□□ 0.89
PRAME-214ENST00000543184 CHD1O14646 1710 aa20.59■□□□□ 0.89
PRAME-214ENST00000543184 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
PRAME-214ENST00000543184 JPH4Q96JJ6 628 aa20.58■□□□□ 0.89
PRAME-214ENST00000543184 FHOD3Q2V2M9 1422 aa20.56■□□□□ 0.88
PRAME-214ENST00000543184 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
PRAME-214ENST00000543184 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
PRAME-214ENST00000543184 TSHZ2Q9NRE2 1034 aa20.51■□□□□ 0.87
PRAME-214ENST00000543184 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
PRAME-214ENST00000543184 NUP160Q12769 1436 aa20.48■□□□□ 0.87
PRAME-214ENST00000543184 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
PRAME-214ENST00000543184 KIAA0586Q9BVV6 1533 aa20.47■□□□□ 0.87
PRAME-214ENST00000543184 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
PRAME-214ENST00000543184 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
PRAME-214ENST00000543184 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
PRAME-214ENST00000543184 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
PRAME-214ENST00000543184 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
PRAME-214ENST00000543184 ERCC6L2Q5T890 1561 aa20.41■□□□□ 0.86
PRAME-214ENST00000543184 SIN3AQ96ST3 1273 aa20.4■□□□□ 0.86
PRAME-214ENST00000543184 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
PRAME-214ENST00000543184 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
PRAME-214ENST00000543184 FKBP8Q14318 412 aa20.35■□□□□ 0.85
PRAME-214ENST00000543184 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
PRAME-214ENST00000543184 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
PRAME-214ENST00000543184 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
PRAME-214ENST00000543184 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
PRAME-214ENST00000543184 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
PRAME-214ENST00000543184 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
PRAME-214ENST00000543184 PLB1Q6P1J6 1458 aa20.28■□□□□ 0.84
PRAME-214ENST00000543184 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.83
PRAME-214ENST00000543184 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
PRAME-214ENST00000543184 KIAA0556O60303 1618 aa20.25■□□□□ 0.83
PRAME-214ENST00000543184 PTPRGP23470 1445 aa20.25■□□□□ 0.83
PRAME-214ENST00000543184 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
PRAME-214ENST00000543184 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
PRAME-214ENST00000543184 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
PRAME-214ENST00000543184 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
PRAME-214ENST00000543184 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
PRAME-214ENST00000543184 FMN1Q68DA7 1419 aa20.17■□□□□ 0.82
PRAME-214ENST00000543184 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
PRAME-214ENST00000543184 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.82
PRAME-214ENST00000543184 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
PRAME-214ENST00000543184 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
PRAME-214ENST00000543184 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
PRAME-214ENST00000543184 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
PRAME-214ENST00000543184 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
PRAME-214ENST00000543184 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.81
PRAME-214ENST00000543184 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
PRAME-214ENST00000543184 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
PRAME-214ENST00000543184 NEFLP07196 543 aa20.05■□□□□ 0.8
PRAME-214ENST00000543184 MTUS2Q5JR59 1369 aa20.04■□□□□ 0.8
PRAME-214ENST00000543184 UACAQ9BZF9 1416 aa20.03■□□□□ 0.8
PRAME-214ENST00000543184 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
PRAME-214ENST00000543184 ANP32CO43423 234 aa20.02■□□□□ 0.8
PRAME-214ENST00000543184 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
PRAME-214ENST00000543184 FYCO1Q9BQS8 1478 aa20.02■□□□□ 0.79
PRAME-214ENST00000543184 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
PRAME-214ENST00000543184 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
PRAME-214ENST00000543184 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
PRAME-214ENST00000543184 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
PRAME-214ENST00000543184 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
PRAME-214ENST00000543184 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
PRAME-214ENST00000543184 ATP10BO94823 1461 aa19.97■□□□□ 0.79
PRAME-214ENST00000543184 MAGI3Q5TCQ9 1506 aa19.96■□□□□ 0.79
PRAME-214ENST00000543184 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
PRAME-214ENST00000543184 BCL11AQ9H165 835 aa19.95■□□□□ 0.78
PRAME-214ENST00000543184 NPM1P06748 294 aaKnown RBP eCLIP19.94■□□□□ 0.78
PRAME-214ENST00000543184 ABCA8O94911 1581 aa19.94■□□□□ 0.78
PRAME-214ENST00000543184 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms