RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 CARMIL2Q6F5E8 1435 aa14.27□□□□□ -0.13
POLR1B-217ENST00000541869 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
POLR1B-217ENST00000541869 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
POLR1B-217ENST00000541869 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-217ENST00000541869 SENP3Q9H4L4 574 aaPredicted RBP14.25□□□□□ -0.13
POLR1B-217ENST00000541869 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
POLR1B-217ENST00000541869 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
POLR1B-217ENST00000541869 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
POLR1B-217ENST00000541869 HRCP23327 699 aa14.23□□□□□ -0.13
POLR1B-217ENST00000541869 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
POLR1B-217ENST00000541869 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
POLR1B-217ENST00000541869 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
POLR1B-217ENST00000541869 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
POLR1B-217ENST00000541869 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
POLR1B-217ENST00000541869 ANP32CO43423 234 aa14.16□□□□□ -0.14
POLR1B-217ENST00000541869 CANXP27824 592 aaKnown RBP14.14□□□□□ -0.15
POLR1B-217ENST00000541869 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
POLR1B-217ENST00000541869 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
POLR1B-217ENST00000541869 RRP7BPQ9NSQ0 103 aa14.12□□□□□ -0.15
POLR1B-217ENST00000541869 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
POLR1B-217ENST00000541869 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
POLR1B-217ENST00000541869 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
POLR1B-217ENST00000541869 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
POLR1B-217ENST00000541869 NPHP1O15259 732 aa14.08□□□□□ -0.16
POLR1B-217ENST00000541869 SMARCA4P51532 1647 aa14.08□□□□□ -0.16
POLR1B-217ENST00000541869 KANK1Q14678 1352 aa14.07□□□□□ -0.16
POLR1B-217ENST00000541869 BCL11AQ9H165 835 aa14.07□□□□□ -0.16
POLR1B-217ENST00000541869 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
POLR1B-217ENST00000541869 POGKQ9P215 609 aa14.06□□□□□ -0.16
POLR1B-217ENST00000541869 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
POLR1B-217ENST00000541869 GGT6Q6P531 493 aa14.05□□□□□ -0.16
POLR1B-217ENST00000541869 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
POLR1B-217ENST00000541869 JPH4Q96JJ6 628 aa14.04□□□□□ -0.16
POLR1B-217ENST00000541869 ARXQ96QS3 562 aa14.03□□□□□ -0.16
POLR1B-217ENST00000541869 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
POLR1B-217ENST00000541869 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
POLR1B-217ENST00000541869 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
POLR1B-217ENST00000541869 WIZO95785 1651 aa14□□□□□ -0.17
POLR1B-217ENST00000541869 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
POLR1B-217ENST00000541869 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
POLR1B-217ENST00000541869 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
POLR1B-217ENST00000541869 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
POLR1B-217ENST00000541869 FAM69CQ0P6D2 419 aa13.95□□□□□ -0.18
POLR1B-217ENST00000541869 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
POLR1B-217ENST00000541869 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
POLR1B-217ENST00000541869 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-217ENST00000541869 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
POLR1B-217ENST00000541869 PTPRGP23470 1445 aa13.91□□□□□ -0.18
POLR1B-217ENST00000541869 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
POLR1B-217ENST00000541869 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
POLR1B-217ENST00000541869 FOXD1Q16676 465 aa13.89□□□□□ -0.19
POLR1B-217ENST00000541869 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
POLR1B-217ENST00000541869 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
POLR1B-217ENST00000541869 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
POLR1B-217ENST00000541869 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
POLR1B-217ENST00000541869 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
POLR1B-217ENST00000541869 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
POLR1B-217ENST00000541869 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
POLR1B-217ENST00000541869 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
POLR1B-217ENST00000541869 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
POLR1B-217ENST00000541869 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
POLR1B-217ENST00000541869 TMX4Q9H1E5 349 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-217ENST00000541869 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
POLR1B-217ENST00000541869 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-217ENST00000541869 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
POLR1B-217ENST00000541869 KIF3BO15066 747 aa13.79□□□□□ -0.2
POLR1B-217ENST00000541869 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
POLR1B-217ENST00000541869 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
POLR1B-217ENST00000541869 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
POLR1B-217ENST00000541869 ANKRD30AQ9BXX3 1397 aa13.76□□□□□ -0.21
POLR1B-217ENST00000541869 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
POLR1B-217ENST00000541869 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■■■■ 31.8
POLR1B-217ENST00000541869 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
POLR1B-217ENST00000541869 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
POLR1B-217ENST00000541869 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
POLR1B-217ENST00000541869 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
POLR1B-217ENST00000541869 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
POLR1B-217ENST00000541869 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
POLR1B-217ENST00000541869 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
POLR1B-217ENST00000541869 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
POLR1B-217ENST00000541869 VPS8Q8N3P4 1428 aa13.72□□□□□ -0.21
POLR1B-217ENST00000541869 SOX12O15370 315 aa13.72□□□□□ -0.21
POLR1B-217ENST00000541869 NUDCQ9Y266 331 aa13.71□□□□□ -0.21
POLR1B-217ENST00000541869 HMGXB3Q12766 1538 aa13.71□□□□□ -0.21
POLR1B-217ENST00000541869 STK26Q9P289 416 aa13.7□□□□□ -0.22
POLR1B-217ENST00000541869 NESP48681 1621 aa13.69□□□□□ -0.22
POLR1B-217ENST00000541869 CFTRP13569 1480 aa13.69□□□□□ -0.22
POLR1B-217ENST00000541869 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
POLR1B-217ENST00000541869 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
POLR1B-217ENST00000541869 FAM9BQ8IZU0 186 aa13.67□□□□□ -0.22
POLR1B-217ENST00000541869 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
POLR1B-217ENST00000541869 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
POLR1B-217ENST00000541869 PKD2Q13563 968 aa13.67□□□□□ -0.22
POLR1B-217ENST00000541869 NUP155O75694 1391 aa13.66□□□□□ -0.22
POLR1B-217ENST00000541869 NGDNQ8NEJ9 315 aaKnown RBP13.66□□□□□ -0.22
POLR1B-217ENST00000541869 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
POLR1B-217ENST00000541869 IGF1RP08069 1367 aa13.64□□□□□ -0.23
POLR1B-217ENST00000541869 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
POLR1B-217ENST00000541869 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
POLR1B-217ENST00000541869 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms