RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
POLR1B-217ENST00000541869 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
POLR1B-217ENST00000541869 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
POLR1B-217ENST00000541869 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
POLR1B-217ENST00000541869 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
POLR1B-217ENST00000541869 APLP2Q06481 763 aa16.56■□□□□ 0.24
POLR1B-217ENST00000541869 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
POLR1B-217ENST00000541869 ABCC9O60706 1549 aa16.4■□□□□ 0.22
POLR1B-217ENST00000541869 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
POLR1B-217ENST00000541869 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
POLR1B-217ENST00000541869 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
POLR1B-217ENST00000541869 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
POLR1B-217ENST00000541869 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
POLR1B-217ENST00000541869 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
POLR1B-217ENST00000541869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
POLR1B-217ENST00000541869 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
POLR1B-217ENST00000541869 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
POLR1B-217ENST00000541869 FBLN2P98095 1184 aa15.74■□□□□ 0.11
POLR1B-217ENST00000541869 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
POLR1B-217ENST00000541869 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
POLR1B-217ENST00000541869 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
POLR1B-217ENST00000541869 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
POLR1B-217ENST00000541869 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
POLR1B-217ENST00000541869 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
POLR1B-217ENST00000541869 PCGF6Q9BYE7 350 aa15.34■□□□□ 0.05
POLR1B-217ENST00000541869 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
POLR1B-217ENST00000541869 BCANQ96GW7 911 aa15.24■□□□□ 0.03
POLR1B-217ENST00000541869 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
POLR1B-217ENST00000541869 NACADO15069 1562 aa15.21■□□□□ 0.03
POLR1B-217ENST00000541869 ITGAEP38570 1179 aa15.18■□□□□ 0.02
POLR1B-217ENST00000541869 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
POLR1B-217ENST00000541869 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
POLR1B-217ENST00000541869 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
POLR1B-217ENST00000541869 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
POLR1B-217ENST00000541869 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
POLR1B-217ENST00000541869 CDK11AQ9UQ88 783 aaPredicted RBP15.08■□□□□ 0
POLR1B-217ENST00000541869 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
POLR1B-217ENST00000541869 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
POLR1B-217ENST00000541869 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
POLR1B-217ENST00000541869 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
POLR1B-217ENST00000541869 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
POLR1B-217ENST00000541869 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
POLR1B-217ENST00000541869 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
POLR1B-217ENST00000541869 ARID3CA6NKF2 412 aa14.96□□□□□ -0.02
POLR1B-217ENST00000541869 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
POLR1B-217ENST00000541869 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
POLR1B-217ENST00000541869 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
POLR1B-217ENST00000541869 ZNF777Q9ULD5 760 aaPredicted RBP14.89□□□□□ -0.03
POLR1B-217ENST00000541869 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
POLR1B-217ENST00000541869 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
POLR1B-217ENST00000541869 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.04
POLR1B-217ENST00000541869 CHGAP10645 457 aaKnown RBP14.76□□□□□ -0.05
POLR1B-217ENST00000541869 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
POLR1B-217ENST00000541869 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
POLR1B-217ENST00000541869 SLC24A1O60721 1099 aa14.71□□□□□ -0.06
POLR1B-217ENST00000541869 CNGB1Q14028 1251 aaPredicted RBP14.68□□□□□ -0.06
POLR1B-217ENST00000541869 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
POLR1B-217ENST00000541869 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
POLR1B-217ENST00000541869 NEFMP07197 916 aa14.66□□□□□ -0.06
POLR1B-217ENST00000541869 ZNF326Q5BKZ1 582 aaKnown RBP14.66□□□□□ -0.06
POLR1B-217ENST00000541869 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
POLR1B-217ENST00000541869 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
POLR1B-217ENST00000541869 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
POLR1B-217ENST00000541869 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
POLR1B-217ENST00000541869 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
POLR1B-217ENST00000541869 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
POLR1B-217ENST00000541869 NEFLP07196 543 aa14.59□□□□□ -0.07
POLR1B-217ENST00000541869 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
POLR1B-217ENST00000541869 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
POLR1B-217ENST00000541869 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
POLR1B-217ENST00000541869 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
POLR1B-217ENST00000541869 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
POLR1B-217ENST00000541869 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
POLR1B-217ENST00000541869 A0A0G2JS52 829 aa14.54□□□□□ -0.08
POLR1B-217ENST00000541869 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
POLR1B-217ENST00000541869 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
POLR1B-217ENST00000541869 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
POLR1B-217ENST00000541869 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
POLR1B-217ENST00000541869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■■□□□ 13
POLR1B-217ENST00000541869 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
POLR1B-217ENST00000541869 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
POLR1B-217ENST00000541869 EEA1Q15075 1411 aa14.43□□□□□ -0.1
POLR1B-217ENST00000541869 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
POLR1B-217ENST00000541869 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
POLR1B-217ENST00000541869 MYT1Q01538 1121 aa14.35□□□□□ -0.11
POLR1B-217ENST00000541869 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
POLR1B-217ENST00000541869 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
POLR1B-217ENST00000541869 MLECQ14165 292 aa14.34□□□□□ -0.11
POLR1B-217ENST00000541869 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
POLR1B-217ENST00000541869 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
POLR1B-217ENST00000541869 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
POLR1B-217ENST00000541869 CLIP1P30622 1438 aa14.31□□□□□ -0.12
POLR1B-217ENST00000541869 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
POLR1B-217ENST00000541869 CUX2O14529 1486 aa14.3□□□□□ -0.12
POLR1B-217ENST00000541869 ZBTB7CA1YPR0 619 aa14.3□□□□□ -0.12
POLR1B-217ENST00000541869 CFDP1Q9UEE9 299 aaPredicted RBP14.28□□□□□ -0.12
POLR1B-217ENST00000541869 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
POLR1B-217ENST00000541869 SOGA1O94964 1423 aa14.28□□□□□ -0.12
POLR1B-217ENST00000541869 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
POLR1B-217ENST00000541869 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms