RNA–Protein interactions for RNA: ENST00000540115.1

ACSL3-210, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 624 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-210ENST00000540115 NUP160Q12769 1436 aa17.08■□□□□ 0.32
ACSL3-210ENST00000540115 IGF1RP08069 1367 aa17.03■□□□□ 0.32
ACSL3-210ENST00000540115 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
ACSL3-210ENST00000540115 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
ACSL3-210ENST00000540115 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
ACSL3-210ENST00000540115 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
ACSL3-210ENST00000540115 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
ACSL3-210ENST00000540115 CUL7Q14999 1698 aa16.96■□□□□ 0.31
ACSL3-210ENST00000540115 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
ACSL3-210ENST00000540115 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
ACSL3-210ENST00000540115 SHROOM2Q13796 1616 aa16.9■□□□□ 0.3
ACSL3-210ENST00000540115 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
ACSL3-210ENST00000540115 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
ACSL3-210ENST00000540115 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
ACSL3-210ENST00000540115 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
ACSL3-210ENST00000540115 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
ACSL3-210ENST00000540115 IQGAP2Q13576 1575 aa16.74■□□□□ 0.27
ACSL3-210ENST00000540115 PTPRGP23470 1445 aa16.74■□□□□ 0.27
ACSL3-210ENST00000540115 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
ACSL3-210ENST00000540115 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
ACSL3-210ENST00000540115 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
ACSL3-210ENST00000540115 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
ACSL3-210ENST00000540115 EEA1Q15075 1411 aa16.69■□□□□ 0.26
ACSL3-210ENST00000540115 PRXQ9BXM0 1461 aa16.67■□□□□ 0.26
ACSL3-210ENST00000540115 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
ACSL3-210ENST00000540115 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
ACSL3-210ENST00000540115 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
ACSL3-210ENST00000540115 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
ACSL3-210ENST00000540115 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
ACSL3-210ENST00000540115 UACAQ9BZF9 1416 aa16.6■□□□□ 0.25
ACSL3-210ENST00000540115 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
ACSL3-210ENST00000540115 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
ACSL3-210ENST00000540115 UHRF1BP1LA0JNW5 1464 aa16.57■□□□□ 0.24
ACSL3-210ENST00000540115 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
ACSL3-210ENST00000540115 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
ACSL3-210ENST00000540115 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
ACSL3-210ENST00000540115 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
ACSL3-210ENST00000540115 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
ACSL3-210ENST00000540115 ADRA2BP18089 450 aa16.51■□□□□ 0.23
ACSL3-210ENST00000540115 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
ACSL3-210ENST00000540115 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
ACSL3-210ENST00000540115 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
ACSL3-210ENST00000540115 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
ACSL3-210ENST00000540115 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
ACSL3-210ENST00000540115 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
ACSL3-210ENST00000540115 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
ACSL3-210ENST00000540115 KIF21BO75037 1637 aa16.41■□□□□ 0.22
ACSL3-210ENST00000540115 ABCA8O94911 1581 aa16.38■□□□□ 0.21
ACSL3-210ENST00000540115 GLI2P10070 1586 aa16.38■□□□□ 0.21
ACSL3-210ENST00000540115 ZCCHC11Q5TAX3 1644 aaKnown RBP16.37■□□□□ 0.21
ACSL3-210ENST00000540115 WDR7Q9Y4E6 1490 aa16.37■□□□□ 0.21
ACSL3-210ENST00000540115 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
ACSL3-210ENST00000540115 SAMD9Q5K651 1589 aa16.35■□□□□ 0.21
ACSL3-210ENST00000540115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
ACSL3-210ENST00000540115 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
ACSL3-210ENST00000540115 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
ACSL3-210ENST00000540115 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
ACSL3-210ENST00000540115 TEX14Q8IWB6 1497 aa16.33■□□□□ 0.2
ACSL3-210ENST00000540115 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
ACSL3-210ENST00000540115 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
ACSL3-210ENST00000540115 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
ACSL3-210ENST00000540115 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
ACSL3-210ENST00000540115 KDM6BO15054 1643 aa16.3■□□□□ 0.2
ACSL3-210ENST00000540115 ATP10BO94823 1461 aa16.29■□□□□ 0.2
ACSL3-210ENST00000540115 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
ACSL3-210ENST00000540115 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
ACSL3-210ENST00000540115 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
ACSL3-210ENST00000540115 MAP3K4Q9Y6R4 1608 aa16.24■□□□□ 0.19
ACSL3-210ENST00000540115 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
ACSL3-210ENST00000540115 ATP1B4Q9UN42 357 aaPredicted RBP16.22■□□□□ 0.19
ACSL3-210ENST00000540115 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
ACSL3-210ENST00000540115 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
ACSL3-210ENST00000540115 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
ACSL3-210ENST00000540115 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
ACSL3-210ENST00000540115 PHLDB1Q86UU1 1377 aa16.19■□□□□ 0.18
ACSL3-210ENST00000540115 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
ACSL3-210ENST00000540115 ARHGAP35Q9NRY4 1499 aa16.16■□□□□ 0.18
ACSL3-210ENST00000540115 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
ACSL3-210ENST00000540115 COL17A1Q9UMD9 1497 aaPredicted RBP16.11■□□□□ 0.17
ACSL3-210ENST00000540115 HECW1Q76N89 1606 aa16.11■□□□□ 0.17
ACSL3-210ENST00000540115 NEO1Q92859 1461 aa16.1■□□□□ 0.17
ACSL3-210ENST00000540115 CLIP1P30622 1438 aa16.08■□□□□ 0.16
ACSL3-210ENST00000540115 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
ACSL3-210ENST00000540115 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
ACSL3-210ENST00000540115 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
ACSL3-210ENST00000540115 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
ACSL3-210ENST00000540115 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
ACSL3-210ENST00000540115 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
ACSL3-210ENST00000540115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.15
ACSL3-210ENST00000540115 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
ACSL3-210ENST00000540115 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
ACSL3-210ENST00000540115 FANCAO15360 1455 aa16.01■□□□□ 0.15
ACSL3-210ENST00000540115 AKNAQ7Z591 1439 aa16.01■□□□□ 0.15
ACSL3-210ENST00000540115 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
ACSL3-210ENST00000540115 DENND4BO75064 1496 aaPredicted RBP15.99■□□□□ 0.15
ACSL3-210ENST00000540115 PLCH2O75038 1416 aa15.99■□□□□ 0.15
ACSL3-210ENST00000540115 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
ACSL3-210ENST00000540115 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
ACSL3-210ENST00000540115 KIF14Q15058 1648 aa15.96■□□□□ 0.15
ACSL3-210ENST00000540115 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms