RNA–Protein interactions for RNA: ENST00000540115.1

ACSL3-210, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 624 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-210ENST00000540115 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
ACSL3-210ENST00000540115 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
ACSL3-210ENST00000540115 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.05
ACSL3-210ENST00000540115 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
ACSL3-210ENST00000540115 ABCC9O60706 1549 aa21.4■■□□□ 1.02
ACSL3-210ENST00000540115 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
ACSL3-210ENST00000540115 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
ACSL3-210ENST00000540115 NACADO15069 1562 aa20.46■□□□□ 0.87
ACSL3-210ENST00000540115 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
ACSL3-210ENST00000540115 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
ACSL3-210ENST00000540115 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
ACSL3-210ENST00000540115 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
ACSL3-210ENST00000540115 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
ACSL3-210ENST00000540115 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
ACSL3-210ENST00000540115 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
ACSL3-210ENST00000540115 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
ACSL3-210ENST00000540115 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
ACSL3-210ENST00000540115 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
ACSL3-210ENST00000540115 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
ACSL3-210ENST00000540115 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
ACSL3-210ENST00000540115 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
ACSL3-210ENST00000540115 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
ACSL3-210ENST00000540115 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
ACSL3-210ENST00000540115 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
ACSL3-210ENST00000540115 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
ACSL3-210ENST00000540115 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
ACSL3-210ENST00000540115 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
ACSL3-210ENST00000540115 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
ACSL3-210ENST00000540115 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
ACSL3-210ENST00000540115 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
ACSL3-210ENST00000540115 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
ACSL3-210ENST00000540115 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
ACSL3-210ENST00000540115 FOXD1Q16676 465 aa18.6■□□□□ 0.57
ACSL3-210ENST00000540115 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
ACSL3-210ENST00000540115 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
ACSL3-210ENST00000540115 WIZO95785 1651 aa18.42■□□□□ 0.54
ACSL3-210ENST00000540115 NESP48681 1621 aa18.41■□□□□ 0.54
ACSL3-210ENST00000540115 CUX2O14529 1486 aa18.4■□□□□ 0.54
ACSL3-210ENST00000540115 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
ACSL3-210ENST00000540115 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
ACSL3-210ENST00000540115 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
ACSL3-210ENST00000540115 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
ACSL3-210ENST00000540115 CFTRP13569 1480 aa18.17■□□□□ 0.5
ACSL3-210ENST00000540115 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
ACSL3-210ENST00000540115 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
ACSL3-210ENST00000540115 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
ACSL3-210ENST00000540115 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
ACSL3-210ENST00000540115 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
ACSL3-210ENST00000540115 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
ACSL3-210ENST00000540115 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
ACSL3-210ENST00000540115 WDR62O43379 1518 aa18.03■□□□□ 0.48
ACSL3-210ENST00000540115 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
ACSL3-210ENST00000540115 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
ACSL3-210ENST00000540115 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
ACSL3-210ENST00000540115 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
ACSL3-210ENST00000540115 MSH5O43196 834 aa17.86■□□□□ 0.45
ACSL3-210ENST00000540115 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
ACSL3-210ENST00000540115 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
ACSL3-210ENST00000540115 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
ACSL3-210ENST00000540115 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
ACSL3-210ENST00000540115 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
ACSL3-210ENST00000540115 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
ACSL3-210ENST00000540115 SOGA1O94964 1423 aa17.6■□□□□ 0.41
ACSL3-210ENST00000540115 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.46e-7■■■□□ 18.4
ACSL3-210ENST00000540115 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
ACSL3-210ENST00000540115 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
ACSL3-210ENST00000540115 CUX1P39880 1505 aa17.53■□□□□ 0.4
ACSL3-210ENST00000540115 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
ACSL3-210ENST00000540115 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
ACSL3-210ENST00000540115 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
ACSL3-210ENST00000540115 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
ACSL3-210ENST00000540115 FBLN2P98095 1184 aa17.48■□□□□ 0.39
ACSL3-210ENST00000540115 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
ACSL3-210ENST00000540115 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
ACSL3-210ENST00000540115 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
ACSL3-210ENST00000540115 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
ACSL3-210ENST00000540115 MAGI1Q96QZ7 1491 aaPredicted RBP17.38■□□□□ 0.37
ACSL3-210ENST00000540115 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
ACSL3-210ENST00000540115 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
ACSL3-210ENST00000540115 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
ACSL3-210ENST00000540115 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
ACSL3-210ENST00000540115 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
ACSL3-210ENST00000540115 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
ACSL3-210ENST00000540115 CHD1O14646 1710 aa17.3■□□□□ 0.36
ACSL3-210ENST00000540115 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
ACSL3-210ENST00000540115 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
ACSL3-210ENST00000540115 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
ACSL3-210ENST00000540115 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
ACSL3-210ENST00000540115 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
ACSL3-210ENST00000540115 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
ACSL3-210ENST00000540115 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
ACSL3-210ENST00000540115 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
ACSL3-210ENST00000540115 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
ACSL3-210ENST00000540115 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
ACSL3-210ENST00000540115 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
ACSL3-210ENST00000540115 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
ACSL3-210ENST00000540115 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
ACSL3-210ENST00000540115 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
ACSL3-210ENST00000540115 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
ACSL3-210ENST00000540115 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms