RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
PCDHB17P-201ENST00000539533 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
PCDHB17P-201ENST00000539533 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
PCDHB17P-201ENST00000539533 CTTNBP2Q8WZ74 1663 aa26.46■■□□□ 1.83
PCDHB17P-201ENST00000539533 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
PCDHB17P-201ENST00000539533 P3H3Q8IVL6 736 aa26.38■■□□□ 1.81
PCDHB17P-201ENST00000539533 APLP2Q06481 763 aa26.35■■□□□ 1.81
PCDHB17P-201ENST00000539533 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
PCDHB17P-201ENST00000539533 EFCAB5A4FU69 1503 aa26.28■■□□□ 1.8
PCDHB17P-201ENST00000539533 FHOD3Q2V2M9 1422 aa26.28■■□□□ 1.8
PCDHB17P-201ENST00000539533 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
PCDHB17P-201ENST00000539533 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
PCDHB17P-201ENST00000539533 FBLN2P98095 1184 aa26.22■■□□□ 1.79
PCDHB17P-201ENST00000539533 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
PCDHB17P-201ENST00000539533 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
PCDHB17P-201ENST00000539533 SAMD9Q5K651 1589 aa26.2■■□□□ 1.78
PCDHB17P-201ENST00000539533 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
PCDHB17P-201ENST00000539533 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
PCDHB17P-201ENST00000539533 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.78
PCDHB17P-201ENST00000539533 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
PCDHB17P-201ENST00000539533 ATP1B4Q9UN42 357 aaPredicted RBP26.11■■□□□ 1.77
PCDHB17P-201ENST00000539533 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
PCDHB17P-201ENST00000539533 FMN1Q68DA7 1419 aa26.09■■□□□ 1.77
PCDHB17P-201ENST00000539533 UGGT2Q9NYU1 1516 aa26.06■■□□□ 1.76
PCDHB17P-201ENST00000539533 CASKIN1Q8WXD9 1431 aa26.06■■□□□ 1.76
PCDHB17P-201ENST00000539533 NUP160Q12769 1436 aa26.04■■□□□ 1.76
PCDHB17P-201ENST00000539533 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
PCDHB17P-201ENST00000539533 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
PCDHB17P-201ENST00000539533 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
PCDHB17P-201ENST00000539533 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
PCDHB17P-201ENST00000539533 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
PCDHB17P-201ENST00000539533 LRRC9Q6ZRR7 1453 aa25.95■■□□□ 1.74
PCDHB17P-201ENST00000539533 CFAP43Q8NDM7 1665 aa25.94■■□□□ 1.74
PCDHB17P-201ENST00000539533 KIAA0556O60303 1618 aa25.94■■□□□ 1.74
PCDHB17P-201ENST00000539533 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
PCDHB17P-201ENST00000539533 CHD1O14646 1710 aa25.93■■□□□ 1.74
PCDHB17P-201ENST00000539533 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
PCDHB17P-201ENST00000539533 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.73
PCDHB17P-201ENST00000539533 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
PCDHB17P-201ENST00000539533 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
PCDHB17P-201ENST00000539533 HECW1Q76N89 1606 aa25.78■■□□□ 1.72
PCDHB17P-201ENST00000539533 PHLDB1Q86UU1 1377 aa25.77■■□□□ 1.72
PCDHB17P-201ENST00000539533 ARID3CA6NKF2 412 aa25.76■■□□□ 1.71
PCDHB17P-201ENST00000539533 MTUS2Q5JR59 1369 aa25.76■■□□□ 1.71
PCDHB17P-201ENST00000539533 EPRSP07814 1512 aaKnown RBP25.75■■□□□ 1.71
PCDHB17P-201ENST00000539533 CCDC18Q5T9S5 1454 aa25.74■■□□□ 1.71
PCDHB17P-201ENST00000539533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
PCDHB17P-201ENST00000539533 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
PCDHB17P-201ENST00000539533 CCNB3Q8WWL7 1395 aa25.73■■□□□ 1.71
PCDHB17P-201ENST00000539533 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
PCDHB17P-201ENST00000539533 RAPGEF6Q8TEU7 1601 aa25.7■■□□□ 1.7
PCDHB17P-201ENST00000539533 MAGI3Q5TCQ9 1506 aa25.69■■□□□ 1.7
PCDHB17P-201ENST00000539533 PLB1Q6P1J6 1458 aa25.69■■□□□ 1.7
PCDHB17P-201ENST00000539533 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
PCDHB17P-201ENST00000539533 SHROOM2Q13796 1616 aa25.64■■□□□ 1.69
PCDHB17P-201ENST00000539533 EHBP1L1Q8N3D4 1523 aa25.64■■□□□ 1.69
PCDHB17P-201ENST00000539533 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
PCDHB17P-201ENST00000539533 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
PCDHB17P-201ENST00000539533 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
PCDHB17P-201ENST00000539533 CLASP1Q7Z460 1538 aa25.6■■□□□ 1.69
PCDHB17P-201ENST00000539533 ITGAEP38570 1179 aa25.6■■□□□ 1.69
PCDHB17P-201ENST00000539533 SUPT6HQ7KZ85 1726 aaKnown RBP25.59■■□□□ 1.69
PCDHB17P-201ENST00000539533 PTPRGP23470 1445 aa25.58■■□□□ 1.69
PCDHB17P-201ENST00000539533 FAM50AQ14320 339 aaKnown RBP25.58■■□□□ 1.68
PCDHB17P-201ENST00000539533 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
PCDHB17P-201ENST00000539533 ABCA8O94911 1581 aa25.55■■□□□ 1.68
PCDHB17P-201ENST00000539533 FGD6Q6ZV73 1430 aa25.52■■□□□ 1.68
PCDHB17P-201ENST00000539533 ARHGEF11O15085 1522 aa25.52■■□□□ 1.68
PCDHB17P-201ENST00000539533 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
PCDHB17P-201ENST00000539533 CDK11AQ9UQ88 783 aaPredicted RBP25.5■■□□□ 1.67
PCDHB17P-201ENST00000539533 ATP10BO94823 1461 aa25.45■■□□□ 1.66
PCDHB17P-201ENST00000539533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
PCDHB17P-201ENST00000539533 TROQ12816 1431 aaPredicted RBP25.41■■□□□ 1.66
PCDHB17P-201ENST00000539533 UACAQ9BZF9 1416 aa25.41■■□□□ 1.66
PCDHB17P-201ENST00000539533 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
PCDHB17P-201ENST00000539533 PTPN23Q9H3S7 1636 aa25.37■■□□□ 1.65
PCDHB17P-201ENST00000539533 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
PCDHB17P-201ENST00000539533 KIF14Q15058 1648 aa25.33■■□□□ 1.65
PCDHB17P-201ENST00000539533 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
PCDHB17P-201ENST00000539533 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
PCDHB17P-201ENST00000539533 PTPRKQ15262 1439 aa25.3■■□□□ 1.64
PCDHB17P-201ENST00000539533 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
PCDHB17P-201ENST00000539533 ADCY10Q96PN6 1610 aa25.29■■□□□ 1.64
PCDHB17P-201ENST00000539533 RAB3GAP2Q9H2M9 1393 aa25.29■■□□□ 1.64
PCDHB17P-201ENST00000539533 SETD5Q9C0A6 1442 aa25.28■■□□□ 1.64
PCDHB17P-201ENST00000539533 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
PCDHB17P-201ENST00000539533 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
PCDHB17P-201ENST00000539533 GPATCH8Q9UKJ3 1502 aaKnown RBP25.23■■□□□ 1.63
PCDHB17P-201ENST00000539533 CFDP1Q9UEE9 299 aaPredicted RBP25.2■■□□□ 1.63
PCDHB17P-201ENST00000539533 UHRF1BP1LA0JNW5 1464 aa25.2■■□□□ 1.63
PCDHB17P-201ENST00000539533 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
PCDHB17P-201ENST00000539533 CHIC2Q9UKJ5 165 aa25.17■■□□□ 1.62
PCDHB17P-201ENST00000539533 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
PCDHB17P-201ENST00000539533 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
PCDHB17P-201ENST00000539533 KDM5BQ9UGL1 1544 aa25.15■■□□□ 1.62
PCDHB17P-201ENST00000539533 ZCCHC11Q5TAX3 1644 aaKnown RBP25.15■■□□□ 1.62
PCDHB17P-201ENST00000539533 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.61
PCDHB17P-201ENST00000539533 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
PCDHB17P-201ENST00000539533 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
PCDHB17P-201ENST00000539533 CAMSAP2Q08AD1 1489 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms