RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CHD1O14646 1710 aa14.01□□□□□ -0.17
DDB1-213ENST00000539332 FBLN2P98095 1184 aa14□□□□□ -0.17
DDB1-213ENST00000539332 CLIP1P30622 1438 aa14□□□□□ -0.17
DDB1-213ENST00000539332 CEP170Q5SW79 1584 aa13.96□□□□□ -0.18
DDB1-213ENST00000539332 NUP160Q12769 1436 aa13.94□□□□□ -0.18
DDB1-213ENST00000539332 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
DDB1-213ENST00000539332 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
DDB1-213ENST00000539332 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
DDB1-213ENST00000539332 ARAP1Q96P48 1450 aa13.92□□□□□ -0.18
DDB1-213ENST00000539332 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
DDB1-213ENST00000539332 HRCP23327 699 aa13.91□□□□□ -0.18
DDB1-213ENST00000539332 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
DDB1-213ENST00000539332 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
DDB1-213ENST00000539332 SAMD9Q5K651 1589 aa13.85□□□□□ -0.19
DDB1-213ENST00000539332 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
DDB1-213ENST00000539332 CLASP1Q7Z460 1538 aa13.82□□□□□ -0.2
DDB1-213ENST00000539332 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
DDB1-213ENST00000539332 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
DDB1-213ENST00000539332 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
DDB1-213ENST00000539332 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
DDB1-213ENST00000539332 DISP1Q96F81 1524 aa13.79□□□□□ -0.2
DDB1-213ENST00000539332 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
DDB1-213ENST00000539332 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
DDB1-213ENST00000539332 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
DDB1-213ENST00000539332 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
DDB1-213ENST00000539332 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
DDB1-213ENST00000539332 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
DDB1-213ENST00000539332 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
DDB1-213ENST00000539332 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
DDB1-213ENST00000539332 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
DDB1-213ENST00000539332 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
DDB1-213ENST00000539332 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.21
DDB1-213ENST00000539332 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.22
DDB1-213ENST00000539332 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
DDB1-213ENST00000539332 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
DDB1-213ENST00000539332 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
DDB1-213ENST00000539332 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
DDB1-213ENST00000539332 PPARGC1BQ86YN6 1023 aaKnown RBP13.64□□□□□ -0.23
DDB1-213ENST00000539332 PTPRGP23470 1445 aa13.63□□□□□ -0.23
DDB1-213ENST00000539332 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
DDB1-213ENST00000539332 APLP2Q06481 763 aa13.61□□□□□ -0.23
DDB1-213ENST00000539332 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
DDB1-213ENST00000539332 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
DDB1-213ENST00000539332 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
DDB1-213ENST00000539332 ABCA8O94911 1581 aa13.6□□□□□ -0.23
DDB1-213ENST00000539332 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
DDB1-213ENST00000539332 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
DDB1-213ENST00000539332 ARHGEF11O15085 1522 aa13.57□□□□□ -0.24
DDB1-213ENST00000539332 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
DDB1-213ENST00000539332 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
DDB1-213ENST00000539332 CCDC18Q5T9S5 1454 aa13.56□□□□□ -0.24
DDB1-213ENST00000539332 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
DDB1-213ENST00000539332 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
DDB1-213ENST00000539332 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
DDB1-213ENST00000539332 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
DDB1-213ENST00000539332 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
DDB1-213ENST00000539332 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
DDB1-213ENST00000539332 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
DDB1-213ENST00000539332 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
DDB1-213ENST00000539332 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
DDB1-213ENST00000539332 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.25
DDB1-213ENST00000539332 UHRF1BP1LA0JNW5 1464 aa13.51□□□□□ -0.25
DDB1-213ENST00000539332 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
DDB1-213ENST00000539332 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
DDB1-213ENST00000539332 ATP10BO94823 1461 aa13.49□□□□□ -0.25
DDB1-213ENST00000539332 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
DDB1-213ENST00000539332 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
DDB1-213ENST00000539332 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
DDB1-213ENST00000539332 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
DDB1-213ENST00000539332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
DDB1-213ENST00000539332 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
DDB1-213ENST00000539332 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
DDB1-213ENST00000539332 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
DDB1-213ENST00000539332 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
DDB1-213ENST00000539332 PHLDB1Q86UU1 1377 aa13.43□□□□□ -0.26
DDB1-213ENST00000539332 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
DDB1-213ENST00000539332 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
DDB1-213ENST00000539332 TROQ12816 1431 aaPredicted RBP13.41□□□□□ -0.26
DDB1-213ENST00000539332 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
DDB1-213ENST00000539332 NCOA2Q15596 1464 aa13.4□□□□□ -0.26
DDB1-213ENST00000539332 PLEKHD1A6NEE1 506 aa13.4□□□□□ -0.26
DDB1-213ENST00000539332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDB1-213ENST00000539332 KIF14Q15058 1648 aa13.38□□□□□ -0.27
DDB1-213ENST00000539332 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
DDB1-213ENST00000539332 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
DDB1-213ENST00000539332 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
DDB1-213ENST00000539332 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
DDB1-213ENST00000539332 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
DDB1-213ENST00000539332 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.27
DDB1-213ENST00000539332 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.28
DDB1-213ENST00000539332 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
DDB1-213ENST00000539332 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
DDB1-213ENST00000539332 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
DDB1-213ENST00000539332 ABCC10Q5T3U5 1492 aa13.32□□□□□ -0.28
DDB1-213ENST00000539332 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
DDB1-213ENST00000539332 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
DDB1-213ENST00000539332 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
DDB1-213ENST00000539332 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
DDB1-213ENST00000539332 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
DDB1-213ENST00000539332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms