RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	RAPGEF2	Q9Y4G8	1499 aa		11.11	□□□□□ -0.63
FDFT1-222	ENST00000538689	TDRD9	Q8NDG6	1382 aa	Known RBP	11.11	□□□□□ -0.63
FDFT1-222	ENST00000538689	EIF4G3	O43432	1585 aa	Known RBP	11.1	□□□□□ -0.63
FDFT1-222	ENST00000538689	ERICH3	Q5RHP9	1530 aa		11.1	□□□□□ -0.63
FDFT1-222	ENST00000538689	PCGF6	Q9BYE7	350 aa		11.09	□□□□□ -0.63
FDFT1-222	ENST00000538689	ABCA10	Q8WWZ4	1543 aa		11.07	□□□□□ -0.64
FDFT1-222	ENST00000538689	TRIM26	Q12899	539 aa	Predicted RBP	11.07	□□□□□ -0.64
FDFT1-222	ENST00000538689	PLCB2	Q00722	1185 aa		11.06	□□□□□ -0.64
FDFT1-222	ENST00000538689	IGF1R	P08069	1367 aa		11.06	□□□□□ -0.64
FDFT1-222	ENST00000538689	ABCA5	Q8WWZ7	1642 aa		11.05	□□□□□ -0.64
FDFT1-222	ENST00000538689	CLIP1	P30622	1438 aa		11.02	□□□□□ -0.65
FDFT1-222	ENST00000538689	PBRM1	Q86U86	1689 aa		11.02	□□□□□ -0.65
FDFT1-222	ENST00000538689	GAPVD1	Q14C86	1478 aa		11.01	□□□□□ -0.65
FDFT1-222	ENST00000538689	CARMIL1	Q5VZK9	1371 aa		10.99	□□□□□ -0.65
FDFT1-222	ENST00000538689	TAOK2	Q9UL54	1235 aa		10.98	□□□□□ -0.65
FDFT1-222	ENST00000538689	SNAPC4	Q5SXM2	1469 aa		10.98	□□□□□ -0.65
FDFT1-222	ENST00000538689	BCAN	Q96GW7	911 aa		10.98	□□□□□ -0.65
FDFT1-222	ENST00000538689	GRIN2B	Q13224	1484 aa		10.97	□□□□□ -0.65
FDFT1-222	ENST00000538689	CHD1	O14646	1710 aa		10.96	□□□□□ -0.66
FDFT1-222	ENST00000538689	HAP1	P54257	671 aa	Predicted RBP	10.95	□□□□□ -0.66
FDFT1-222	ENST00000538689	VPS8	Q8N3P4	1428 aa		10.94	□□□□□ -0.66
FDFT1-222	ENST00000538689	CUL7	Q14999	1698 aa		10.93	□□□□□ -0.66
FDFT1-222	ENST00000538689	FBLN2	P98095	1184 aa		10.92	□□□□□ -0.66
FDFT1-222	ENST00000538689	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.92	□□□□□ -0.66
FDFT1-222	ENST00000538689	ADAMTS12	P58397	1594 aa		10.92	□□□□□ -0.66
FDFT1-222	ENST00000538689	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.91	□□□□□ -0.66
FDFT1-222	ENST00000538689	RANGAP1	P46060	587 aa	Predicted RBP	10.91	□□□□□ -0.66
FDFT1-222	ENST00000538689	SYNJ2	O15056	1496 aa		10.89	□□□□□ -0.67
FDFT1-222	ENST00000538689	ARAP1	Q96P48	1450 aa		10.89	□□□□□ -0.67
FDFT1-222	ENST00000538689	ARHGAP35	Q9NRY4	1499 aa		10.88	□□□□□ -0.67
FDFT1-222	ENST00000538689	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.87	□□□□□ -0.67
FDFT1-222	ENST00000538689	HRC	P23327	699 aa		10.87	□□□□□ -0.67
FDFT1-222	ENST00000538689	SCAF1	Q9H7N4	1312 aa	Known RBP	10.87	□□□□□ -0.67
FDFT1-222	ENST00000538689	FHAD1	B1AJZ9	1412 aa		10.87	□□□□□ -0.67
FDFT1-222	ENST00000538689	GRIN2A	Q12879	1464 aa		10.86	□□□□□ -0.67
FDFT1-222	ENST00000538689	OSCAR	Q8IYS5	282 aa		10.84	□□□□□ -0.67
FDFT1-222	ENST00000538689	CEP170	Q5SW79	1584 aa		10.84	□□□□□ -0.67
FDFT1-222	ENST00000538689	APLP2	Q06481	763 aa		10.83	□□□□□ -0.68
FDFT1-222	ENST00000538689	TPRN	Q4KMQ1	711 aa		10.83	□□□□□ -0.68
FDFT1-222	ENST00000538689	CTTNBP2	Q8WZ74	1663 aa		10.81	□□□□□ -0.68
FDFT1-222	ENST00000538689	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.8	□□□□□ -0.68
FDFT1-222	ENST00000538689	NUP160	Q12769	1436 aa		10.8	□□□□□ -0.68
FDFT1-222	ENST00000538689	CLASP1	Q7Z460	1538 aa		10.8	□□□□□ -0.68
FDFT1-222	ENST00000538689	DNAJC5	Q9H3Z4	198 aa		10.79	□□□□□ -0.68
FDFT1-222	ENST00000538689	EFCAB5	A4FU69	1503 aa		10.79	□□□□□ -0.68
FDFT1-222	ENST00000538689	ATXN8OS	P0DMR3	200 aa		10.76	□□□□□ -0.69
FDFT1-222	ENST00000538689	SLC4A2	P04920	1241 aa		10.75	□□□□□ -0.69
FDFT1-222	ENST00000538689	ERCC6L2	Q5T890	1561 aa		10.75	□□□□□ -0.69
FDFT1-222	ENST00000538689	DAXX	Q9UER7	740 aa	Predicted RBP	10.74	□□□□□ -0.69
FDFT1-222	ENST00000538689	MAP3K1	Q13233	1512 aa		10.73	□□□□□ -0.69
FDFT1-222	ENST00000538689	KANK4	Q5T7N3	995 aa	Predicted RBP	10.73	□□□□□ -0.69
FDFT1-222	ENST00000538689	SAMD9	Q5K651	1589 aa		10.73	□□□□□ -0.69
FDFT1-222	ENST00000538689	FHOD3	Q2V2M9	1422 aa		10.72	□□□□□ -0.69
FDFT1-222	ENST00000538689	RIMBP3C	A6NJZ7	1639 aa		10.72	□□□□□ -0.69
FDFT1-222	ENST00000538689	RIMBP3B	A6NNM3	1639 aa		10.72	□□□□□ -0.69
FDFT1-222	ENST00000538689	RIMBP3	Q9UFD9	1639 aa		10.72	□□□□□ -0.69
FDFT1-222	ENST00000538689	P3H3	Q8IVL6	736 aa		10.72	□□□□□ -0.69
FDFT1-222	ENST00000538689	SHROOM2	Q13796	1616 aa		10.71	□□□□□ -0.69
FDFT1-222	ENST00000538689	ARHGEF11	O15085	1522 aa		10.71	□□□□□ -0.69
FDFT1-222	ENST00000538689	KIAA0586	Q9BVV6	1533 aa		10.71	□□□□□ -0.69
FDFT1-222	ENST00000538689	FMN1	Q68DA7	1419 aa		10.71	□□□□□ -0.7
FDFT1-222	ENST00000538689	IQGAP2	Q13576	1575 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	JPH4	Q96JJ6	628 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	RNF216	Q9NWF9	866 aa	Predicted RBP	10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	TIMELESS	Q9UNS1	1208 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	FYCO1	Q9BQS8	1478 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	CASKIN1	Q8WXD9	1431 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	TIAM1	Q13009	1591 aa		10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.69	□□□□□ -0.7
FDFT1-222	ENST00000538689	PCF11	O94913	1555 aa	Known RBP	10.68	□□□□□ -0.7
FDFT1-222	ENST00000538689	ZEB1	P37275	1124 aa	Predicted RBP	10.68	□□□□□ -0.7
FDFT1-222	ENST00000538689	VSIG10	Q8N0Z9	540 aa		10.68	□□□□□ -0.7
FDFT1-222	ENST00000538689	PRG4	Q92954	1404 aa	Predicted RBP	10.67	□□□□□ -0.7
FDFT1-222	ENST00000538689	MYCN	P04198	464 aa	Predicted RBP	10.66	□□□□□ -0.7
FDFT1-222	ENST00000538689	LRRC9	Q6ZRR7	1453 aa		10.66	□□□□□ -0.7
FDFT1-222	ENST00000538689	UGGT2	Q9NYU1	1516 aa		10.65	□□□□□ -0.7
FDFT1-222	ENST00000538689	CFAP43	Q8NDM7	1665 aa		10.65	□□□□□ -0.7
FDFT1-222	ENST00000538689	DISP1	Q96F81	1524 aa		10.64	□□□□□ -0.71
FDFT1-222	ENST00000538689	RRBP1	Q9P2E9	1410 aa	Known RBP	10.64	□□□□□ -0.71
FDFT1-222	ENST00000538689	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.62	□□□□□ -0.71
FDFT1-222	ENST00000538689	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.62	□□□□□ -0.71
FDFT1-222	ENST00000538689	CYB5RL	Q6IPT4	315 aa		10.61	□□□□□ -0.71
FDFT1-222	ENST00000538689	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.61	□□□□□ -0.71
FDFT1-222	ENST00000538689	TULP1	O00294	542 aa	Predicted RBP	10.6	□□□□□ -0.71
FDFT1-222	ENST00000538689	KIAA0556	O60303	1618 aa		10.6	□□□□□ -0.71
FDFT1-222	ENST00000538689	CCNB3	Q8WWL7	1395 aa		10.6	□□□□□ -0.71
FDFT1-222	ENST00000538689	CCER1	Q8TC90	406 aa	Predicted RBP	10.59	□□□□□ -0.71
FDFT1-222	ENST00000538689	KDM2A	Q9Y2K7	1162 aa		10.58	□□□□□ -0.72
FDFT1-222	ENST00000538689	LRRIQ1	Q96JM4	1722 aa		10.57	□□□□□ -0.72
FDFT1-222	ENST00000538689	PHLDB1	Q86UU1	1377 aa		10.57	□□□□□ -0.72
FDFT1-222	ENST00000538689	CCDC18	Q5T9S5	1454 aa		10.56	□□□□□ -0.72
FDFT1-222	ENST00000538689	HECW1	Q76N89	1606 aa		10.55	□□□□□ -0.72
FDFT1-222	ENST00000538689	CARMIL2	Q6F5E8	1435 aa		10.55	□□□□□ -0.72
FDFT1-222	ENST00000538689	MTUS2	Q5JR59	1369 aa		10.55	□□□□□ -0.72
FDFT1-222	ENST00000538689	ARX	Q96QS3	562 aa		10.53	□□□□□ -0.72
FDFT1-222	ENST00000538689	PTPRG	P23470	1445 aa		10.53	□□□□□ -0.72
FDFT1-222	ENST00000538689	EPRS	P07814	1512 aa	Known RBP	10.53	□□□□□ -0.72
FDFT1-222	ENST00000538689	ADCY10	Q96PN6	1610 aa		10.52	□□□□□ -0.73
FDFT1-222	ENST00000538689	PLB1	Q6P1J6	1458 aa		10.52	□□□□□ -0.73
FDFT1-222	ENST00000538689	EHBP1L1	Q8N3D4	1523 aa		10.51	□□□□□ -0.73

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