RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 U2AF2P26368 475 aaKnown RBP eCLIP8.14□□□□□ -1.111e-48■□□□□ 9.9
FDFT1-222ENST00000538689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.22□□□□□ -1.251e-38■■■■■ 34.2
FDFT1-222ENST00000538689 DDX3XO00571 662 aaKnown RBP eCLIP7.59□□□□□ -1.193e-33■■□□□ 12.7
FDFT1-222ENST00000538689 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.935e-31■□□□□ 8.6
FDFT1-222ENST00000538689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.733e-30■■□□□ 11.7
FDFT1-222ENST00000538689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.999e-26■□□□□ 11.3
FDFT1-222ENST00000538689 DDX42Q86XP3 938 aaKnown RBP eCLIP7.4□□□□□ -1.233e-22■■■□□ 15.8
FDFT1-222ENST00000538689 QKIQ96PU8 341 aaKnown RBP eCLIP7.26□□□□□ -1.252e-20■■□□□ 12.4
FDFT1-222ENST00000538689 PABPC4Q13310 644 aaKnown RBP eCLIP7.8□□□□□ -1.165e-20■■■□□ 18.3
FDFT1-222ENST00000538689 LARP4Q71RC2 724 aaKnown RBP eCLIP6.91□□□□□ -1.32e-19■■□□□ 12.7
FDFT1-222ENST00000538689 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.13e-19■□□□□ 9.9
FDFT1-222ENST00000538689 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.13e-19■□□□□ 8.7
FDFT1-222ENST00000538689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.83□□□□□ -1.167e-19■□□□□ 10.8
FDFT1-222ENST00000538689 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.32□□□□□ -1.243e-17■■□□□ 12.1
FDFT1-222ENST00000538689 TARDBPQ13148 414 aaKnown RBP eCLIP6.52□□□□□ -1.373e-17■■■■□ 20.6
FDFT1-222ENST00000538689 AATFQ9NY61 560 aaKnown RBP eCLIP8.22□□□□□ -1.094e-17■■■■■ 43.2
FDFT1-222ENST00000538689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.84□□□□□ -1.315e-17■■■■■ 44.8
FDFT1-222ENST00000538689 PPIGQ13427 754 aaKnown RBP eCLIP7.14□□□□□ -1.278e-13■□□□□ 8.3
FDFT1-222ENST00000538689 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.199e-13■■□□□ 12.9
FDFT1-222ENST00000538689 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.46□□□□□ -1.379e-13■□□□□ 9.4
FDFT1-222ENST00000538689 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.38□□□□□ -1.074e-12■□□□□ 9.7
FDFT1-222ENST00000538689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.824e-12■■■■□ 21
FDFT1-222ENST00000538689 DDX6P26196 483 aaKnown RBP eCLIP7.06□□□□□ -1.286e-12■■■□□ 14.6
FDFT1-222ENST00000538689 SUB1P53999 127 aaKnown RBP eCLIP5.63□□□□□ -1.512e-11■■■■■ 36.3
FDFT1-222ENST00000538689 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.58□□□□□ -1.527e-11■■■■■ 31
FDFT1-222ENST00000538689 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.038e-11■■■□□ 16.2
FDFT1-222ENST00000538689 RPS3P23396 243 aaKnown RBP eCLIP6.97□□□□□ -1.292e-10■■■■□ 19.9
FDFT1-222ENST00000538689 ILF3Q12906 894 aaKnown RBP eCLIP6.7□□□□□ -1.342e-10■■■■■ 34.8
FDFT1-222ENST00000538689 RBM22Q9NW64 420 aaKnown RBP eCLIP7.15□□□□□ -1.263e-10■■■■■ 33.8
FDFT1-222ENST00000538689 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.06□□□□□ -1.284e-10■■■□□ 14.8
FDFT1-222ENST00000538689 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.216e-10■■■□□ 15.6
FDFT1-222ENST00000538689 SAFBQ15424 915 aaKnown RBP eCLIP8.12□□□□□ -1.117e-10■■■■■ 30.1
FDFT1-222ENST00000538689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.221e-9■□□□□ 10.6
FDFT1-222ENST00000538689 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.352e-9■□□□□ 10.8
FDFT1-222ENST00000538689 EFTUD2Q15029 972 aaKnown RBP eCLIP7.19□□□□□ -1.262e-9■■□□□ 14.3
FDFT1-222ENST00000538689 PCBP1Q15365 356 aaKnown RBP eCLIP7.52□□□□□ -1.217e-9■■■■□ 19.5
FDFT1-222ENST00000538689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.15□□□□□ -1.278e-9■□□□□ 9.3
FDFT1-222ENST00000538689 FXR2P51116 673 aaKnown RBP eCLIP7.92□□□□□ -1.143e-8■□□□□ 10.2
FDFT1-222ENST00000538689 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.153e-8■■□□□ 13.8
FDFT1-222ENST00000538689 FUSP35637 526 aaKnown RBP eCLIP4.37□□□□□ -1.713e-8■□□□□ 11.3
FDFT1-222ENST00000538689 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.8□□□□□ -1.165e-8■□□□□ 9.2
FDFT1-222ENST00000538689 SND1Q7KZF4 910 aaKnown RBP eCLIP8.42□□□□□ -1.066e-8■■■□□ 16.4
FDFT1-222ENST00000538689 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.126e-8■■■■□ 22.1
FDFT1-222ENST00000538689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.27□□□□□ -0.931e-7■■■□□ 15.7
FDFT1-222ENST00000538689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.35□□□□□ -1.392e-7■□□□□ 10.6
FDFT1-222ENST00000538689 SF3B4Q15427 424 aaKnown RBP eCLIP6.06□□□□□ -1.442e-7■■■■□ 23.5
FDFT1-222ENST00000538689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.142e-7■■■□□ 17
FDFT1-222ENST00000538689 RBM15Q96T37 977 aaKnown RBP eCLIP7.3□□□□□ -1.242e-7■■■■□ 21.8
FDFT1-222ENST00000538689 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.4□□□□□ -1.233e-7■□□□□ 11.2
FDFT1-222ENST00000538689 AQRO60306 1485 aaKnown RBP eCLIP11.11□□□□□ -0.633e-7■■■■□ 23
FDFT1-222ENST00000538689 SRSF1Q07955 248 aaKnown RBP eCLIP5.85□□□□□ -1.473e-7■■■□□ 17.7
FDFT1-222ENST00000538689 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.06□□□□□ -1.443e-7■■■■■ 40
FDFT1-222ENST00000538689 EWSR1Q01844 656 aaKnown RBP eCLIP5.79□□□□□ -1.483e-7■■■□□ 14.9
FDFT1-222ENST00000538689 TIA1P31483 386 aaKnown RBP eCLIP6.75□□□□□ -1.334e-7■■■■■ 71.8
FDFT1-222ENST00000538689 SMNDC1O75940 238 aaKnown RBP eCLIP6.67□□□□□ -1.346e-7■■□□□ 13.7
FDFT1-222ENST00000538689 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.787e-7■■■■□ 20.8
FDFT1-222ENST00000538689 ZC3H11AO75152 810 aaKnown RBP eCLIP7.58□□□□□ -1.27e-7■□□□□ 8.7
FDFT1-222ENST00000538689 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.888e-7■□□□□ 11
FDFT1-222ENST00000538689 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.19□□□□□ -1.18e-7■□□□□ 8.5
FDFT1-222ENST00000538689 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.179e-7■■■□□ 15.3
FDFT1-222ENST00000538689 TIAL1Q01085 375 aaKnown RBP eCLIP7.01□□□□□ -1.291e-6■■■■□ 25.6
FDFT1-222ENST00000538689 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.44□□□□□ -1.221e-6■□□□□ 9.7
FDFT1-222ENST00000538689 FXR1P51114 621 aaKnown RBP eCLIP7.77□□□□□ -1.171e-6■■■■□ 20.1
FDFT1-222ENST00000538689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■■■■■ 27.6
FDFT1-222ENST00000538689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.72□□□□□ -1.172e-6■□□□□ 10.3
FDFT1-222ENST00000538689 MATR3P43243 847 aaKnown RBP eCLIP7.57□□□□□ -1.22e-6■■■■□ 20.5
FDFT1-222ENST00000538689 ZRANB2O95218 330 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■■■■ 39.6
FDFT1-222ENST00000538689 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■■□□ 16.6
FDFT1-222ENST00000538689 NCBP2P52298 156 aaKnown RBP eCLIP6.63□□□□□ -1.352e-6■□□□□ 8.7
FDFT1-222ENST00000538689 TAF15Q92804 592 aaKnown RBP eCLIP5.7□□□□□ -1.52e-6■□□□□ 8.8
FDFT1-222ENST00000538689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■□□□□ 10
FDFT1-222ENST00000538689 NONOQ15233 471 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■■□□□ 12.1
FDFT1-222ENST00000538689 PRPF4O43172 522 aaKnown RBP eCLIP7.18□□□□□ -1.262e-6■■□□□ 11.5
FDFT1-222ENST00000538689 METAP2P50579 478 aaKnown RBP eCLIP8.21□□□□□ -1.12e-6■■□□□ 12.1
FDFT1-222ENST00000538689 SF3B1O75533 1304 aaKnown RBP eCLIP7.27□□□□□ -1.253e-6■■■■■ 29.8
FDFT1-222ENST00000538689 DDX51Q8N8A6 666 aaKnown RBP eCLIP7□□□□□ -1.293e-6■■□□□ 12.2
FDFT1-222ENST00000538689 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.39□□□□□ -1.393e-6■□□□□ 10.8
FDFT1-222ENST00000538689 SF3A3Q12874 501 aaKnown RBP eCLIP7.08□□□□□ -1.284e-6■■■■□ 22.2
FDFT1-222ENST00000538689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.95□□□□□ -1.34e-6■■■□□ 15.7
FDFT1-222ENST00000538689 NKRFO15226 690 aaKnown RBP eCLIP7.76□□□□□ -1.175e-6■□□□□ 8.5
FDFT1-222ENST00000538689 WDR43Q15061 677 aaKnown RBP eCLIP9.37□□□□□ -0.919e-6■■■□□ 15.6
Retrieved 81 of 81 RNA–protein pairs in 11.6 ms