RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
DDB1-211ENST00000538280 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
DDB1-211ENST00000538280 CEP170Q5SW79 1584 aa14.53□□□□□ -0.08
DDB1-211ENST00000538280 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
DDB1-211ENST00000538280 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
DDB1-211ENST00000538280 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
DDB1-211ENST00000538280 SHROOM2Q13796 1616 aa14.47□□□□□ -0.09
DDB1-211ENST00000538280 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
DDB1-211ENST00000538280 ZEB1P37275 1124 aaPredicted RBP14.44□□□□□ -0.1
DDB1-211ENST00000538280 NUP160Q12769 1436 aa14.43□□□□□ -0.1
DDB1-211ENST00000538280 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
DDB1-211ENST00000538280 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
DDB1-211ENST00000538280 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
DDB1-211ENST00000538280 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
DDB1-211ENST00000538280 AEBP2Q6ZN18 517 aaPredicted RBP14.37□□□□□ -0.11
DDB1-211ENST00000538280 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
DDB1-211ENST00000538280 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
DDB1-211ENST00000538280 CLIP1P30622 1438 aa14.34□□□□□ -0.11
DDB1-211ENST00000538280 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
DDB1-211ENST00000538280 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
DDB1-211ENST00000538280 PRG4Q92954 1404 aaPredicted RBP14.28□□□□□ -0.12
DDB1-211ENST00000538280 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.12
DDB1-211ENST00000538280 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
DDB1-211ENST00000538280 MAPKBP1O60336 1514 aa14.21□□□□□ -0.13
DDB1-211ENST00000538280 TSPOAP1O95153 1857 aa14.21□□□□□ -0.14
DDB1-211ENST00000538280 ABCC10Q5T3U5 1492 aa14.2□□□□□ -0.14
DDB1-211ENST00000538280 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
DDB1-211ENST00000538280 KDM6BO15054 1643 aa14.16□□□□□ -0.14
DDB1-211ENST00000538280 IGF1RP08069 1367 aa14.13□□□□□ -0.15
DDB1-211ENST00000538280 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
DDB1-211ENST00000538280 CUL7Q14999 1698 aa14.13□□□□□ -0.15
DDB1-211ENST00000538280 PPRC1Q5VV67 1664 aaKnown RBP14.12□□□□□ -0.15
DDB1-211ENST00000538280 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
DDB1-211ENST00000538280 KIAA0586Q9BVV6 1533 aa14.1□□□□□ -0.15
DDB1-211ENST00000538280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
DDB1-211ENST00000538280 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
DDB1-211ENST00000538280 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
DDB1-211ENST00000538280 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
DDB1-211ENST00000538280 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
DDB1-211ENST00000538280 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
DDB1-211ENST00000538280 ABCC2Q92887 1545 aa14.01□□□□□ -0.17
DDB1-211ENST00000538280 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
DDB1-211ENST00000538280 APLP2Q06481 763 aa14.01□□□□□ -0.17
DDB1-211ENST00000538280 IQGAP2Q13576 1575 aa14□□□□□ -0.17
DDB1-211ENST00000538280 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
DDB1-211ENST00000538280 CTTNBP2Q8WZ74 1663 aa13.99□□□□□ -0.17
DDB1-211ENST00000538280 GLI2P10070 1586 aa13.98□□□□□ -0.17
DDB1-211ENST00000538280 PTPRGP23470 1445 aa13.98□□□□□ -0.17
DDB1-211ENST00000538280 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
DDB1-211ENST00000538280 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
DDB1-211ENST00000538280 TIAM1Q13009 1591 aa13.97□□□□□ -0.17
DDB1-211ENST00000538280 DISP1Q96F81 1524 aa13.97□□□□□ -0.17
DDB1-211ENST00000538280 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
DDB1-211ENST00000538280 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.17
DDB1-211ENST00000538280 ZCCHC11Q5TAX3 1644 aaKnown RBP13.96□□□□□ -0.17
DDB1-211ENST00000538280 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
DDB1-211ENST00000538280 COL17A1Q9UMD9 1497 aaPredicted RBP13.95□□□□□ -0.18
DDB1-211ENST00000538280 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
DDB1-211ENST00000538280 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
DDB1-211ENST00000538280 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
DDB1-211ENST00000538280 KIAA0556O60303 1618 aa13.92□□□□□ -0.18
DDB1-211ENST00000538280 PLB1Q6P1J6 1458 aa13.91□□□□□ -0.18
DDB1-211ENST00000538280 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
DDB1-211ENST00000538280 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
DDB1-211ENST00000538280 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.19
DDB1-211ENST00000538280 UACAQ9BZF9 1416 aa13.9□□□□□ -0.19
DDB1-211ENST00000538280 UGGT2Q9NYU1 1516 aa13.89□□□□□ -0.19
DDB1-211ENST00000538280 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
DDB1-211ENST00000538280 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
DDB1-211ENST00000538280 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
DDB1-211ENST00000538280 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
DDB1-211ENST00000538280 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
DDB1-211ENST00000538280 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
DDB1-211ENST00000538280 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
DDB1-211ENST00000538280 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
DDB1-211ENST00000538280 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
DDB1-211ENST00000538280 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
DDB1-211ENST00000538280 DHX57Q6P158 1386 aaKnown RBP13.81□□□□□ -0.2
DDB1-211ENST00000538280 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
DDB1-211ENST00000538280 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
DDB1-211ENST00000538280 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
DDB1-211ENST00000538280 ABCA8O94911 1581 aa13.79□□□□□ -0.2
DDB1-211ENST00000538280 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
DDB1-211ENST00000538280 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
DDB1-211ENST00000538280 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
DDB1-211ENST00000538280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDB1-211ENST00000538280 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
DDB1-211ENST00000538280 MAGI3Q5TCQ9 1506 aa13.73□□□□□ -0.21
DDB1-211ENST00000538280 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
DDB1-211ENST00000538280 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
DDB1-211ENST00000538280 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
DDB1-211ENST00000538280 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
DDB1-211ENST00000538280 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
DDB1-211ENST00000538280 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
DDB1-211ENST00000538280 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
DDB1-211ENST00000538280 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
DDB1-211ENST00000538280 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
DDB1-211ENST00000538280 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
DDB1-211ENST00000538280 KCNH8Q96L42 1107 aa13.64□□□□□ -0.23
DDB1-211ENST00000538280 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms