RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 EFCAB5A4FU69 1503 aa17.12■□□□□ 0.33
SLC28A1-204ENST00000538177 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
SLC28A1-204ENST00000538177 CTTNBP2Q8WZ74 1663 aa17.09■□□□□ 0.33
SLC28A1-204ENST00000538177 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
SLC28A1-204ENST00000538177 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SLC28A1-204ENST00000538177 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
SLC28A1-204ENST00000538177 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
SLC28A1-204ENST00000538177 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
SLC28A1-204ENST00000538177 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
SLC28A1-204ENST00000538177 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
SLC28A1-204ENST00000538177 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
SLC28A1-204ENST00000538177 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
SLC28A1-204ENST00000538177 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
SLC28A1-204ENST00000538177 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
SLC28A1-204ENST00000538177 FMN1Q68DA7 1419 aa17■□□□□ 0.31
SLC28A1-204ENST00000538177 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
SLC28A1-204ENST00000538177 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
SLC28A1-204ENST00000538177 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
SLC28A1-204ENST00000538177 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
SLC28A1-204ENST00000538177 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
SLC28A1-204ENST00000538177 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
SLC28A1-204ENST00000538177 WDR62O43379 1518 aa16.93■□□□□ 0.3
SLC28A1-204ENST00000538177 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
SLC28A1-204ENST00000538177 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
SLC28A1-204ENST00000538177 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
SLC28A1-204ENST00000538177 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
SLC28A1-204ENST00000538177 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
SLC28A1-204ENST00000538177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.29
SLC28A1-204ENST00000538177 ITGAEP38570 1179 aa16.87■□□□□ 0.29
SLC28A1-204ENST00000538177 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
SLC28A1-204ENST00000538177 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
SLC28A1-204ENST00000538177 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
SLC28A1-204ENST00000538177 RAB3GAP2Q9H2M9 1393 aa16.83■□□□□ 0.29
SLC28A1-204ENST00000538177 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
SLC28A1-204ENST00000538177 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
SLC28A1-204ENST00000538177 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
SLC28A1-204ENST00000538177 LRRIQ1Q96JM4 1722 aa16.8■□□□□ 0.28
SLC28A1-204ENST00000538177 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SLC28A1-204ENST00000538177 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
SLC28A1-204ENST00000538177 UGGT2Q9NYU1 1516 aa16.78■□□□□ 0.28
SLC28A1-204ENST00000538177 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.27
SLC28A1-204ENST00000538177 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
SLC28A1-204ENST00000538177 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
SLC28A1-204ENST00000538177 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
SLC28A1-204ENST00000538177 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
SLC28A1-204ENST00000538177 HECW1Q76N89 1606 aa16.73■□□□□ 0.27
SLC28A1-204ENST00000538177 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
SLC28A1-204ENST00000538177 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
SLC28A1-204ENST00000538177 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
SLC28A1-204ENST00000538177 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
SLC28A1-204ENST00000538177 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
SLC28A1-204ENST00000538177 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
SLC28A1-204ENST00000538177 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
SLC28A1-204ENST00000538177 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
SLC28A1-204ENST00000538177 DISP1Q96F81 1524 aa16.68■□□□□ 0.26
SLC28A1-204ENST00000538177 KIAA0556O60303 1618 aa16.66■□□□□ 0.26
SLC28A1-204ENST00000538177 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
SLC28A1-204ENST00000538177 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
SLC28A1-204ENST00000538177 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
SLC28A1-204ENST00000538177 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SLC28A1-204ENST00000538177 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
SLC28A1-204ENST00000538177 CDK13Q14004 1512 aaKnown RBP16.62■□□□□ 0.25
SLC28A1-204ENST00000538177 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
SLC28A1-204ENST00000538177 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
SLC28A1-204ENST00000538177 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
SLC28A1-204ENST00000538177 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
SLC28A1-204ENST00000538177 NUP160Q12769 1436 aa16.58■□□□□ 0.25
SLC28A1-204ENST00000538177 NAIPQ13075 1403 aa16.58■□□□□ 0.24
SLC28A1-204ENST00000538177 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
SLC28A1-204ENST00000538177 MIER1Q8N108 512 aa16.57■□□□□ 0.24
SLC28A1-204ENST00000538177 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
SLC28A1-204ENST00000538177 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
SLC28A1-204ENST00000538177 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
SLC28A1-204ENST00000538177 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
SLC28A1-204ENST00000538177 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
SLC28A1-204ENST00000538177 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
SLC28A1-204ENST00000538177 FBLN2P98095 1184 aa16.53■□□□□ 0.24
SLC28A1-204ENST00000538177 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
SLC28A1-204ENST00000538177 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
SLC28A1-204ENST00000538177 AKNAQ7Z591 1439 aa16.52■□□□□ 0.24
SLC28A1-204ENST00000538177 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
SLC28A1-204ENST00000538177 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.23
SLC28A1-204ENST00000538177 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SLC28A1-204ENST00000538177 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
SLC28A1-204ENST00000538177 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
SLC28A1-204ENST00000538177 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.22
SLC28A1-204ENST00000538177 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
SLC28A1-204ENST00000538177 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
SLC28A1-204ENST00000538177 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
SLC28A1-204ENST00000538177 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
SLC28A1-204ENST00000538177 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
SLC28A1-204ENST00000538177 DAPK1P53355 1430 aa16.42■□□□□ 0.22
SLC28A1-204ENST00000538177 ABCC5O15440 1437 aa16.4■□□□□ 0.22
SLC28A1-204ENST00000538177 ABCA8O94911 1581 aa16.4■□□□□ 0.22
SLC28A1-204ENST00000538177 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
SLC28A1-204ENST00000538177 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
SLC28A1-204ENST00000538177 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
SLC28A1-204ENST00000538177 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
SLC28A1-204ENST00000538177 KDM6BO15054 1643 aa16.37■□□□□ 0.21
SLC28A1-204ENST00000538177 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms