RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
SLC28A1-204ENST00000538177 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
SLC28A1-204ENST00000538177 ZCCHC6Q5VYS8 1495 aaKnown RBP20.8■□□□□ 0.92
SLC28A1-204ENST00000538177 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
SLC28A1-204ENST00000538177 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
SLC28A1-204ENST00000538177 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
SLC28A1-204ENST00000538177 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
SLC28A1-204ENST00000538177 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
SLC28A1-204ENST00000538177 ABCC9O60706 1549 aa19.69■□□□□ 0.74
SLC28A1-204ENST00000538177 NACADO15069 1562 aa19.65■□□□□ 0.74
SLC28A1-204ENST00000538177 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SLC28A1-204ENST00000538177 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
SLC28A1-204ENST00000538177 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
SLC28A1-204ENST00000538177 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
SLC28A1-204ENST00000538177 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
SLC28A1-204ENST00000538177 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
SLC28A1-204ENST00000538177 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
SLC28A1-204ENST00000538177 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
SLC28A1-204ENST00000538177 WIZO95785 1651 aa18.93■□□□□ 0.62
SLC28A1-204ENST00000538177 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
SLC28A1-204ENST00000538177 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
SLC28A1-204ENST00000538177 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
SLC28A1-204ENST00000538177 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
SLC28A1-204ENST00000538177 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
SLC28A1-204ENST00000538177 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
SLC28A1-204ENST00000538177 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
SLC28A1-204ENST00000538177 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
SLC28A1-204ENST00000538177 SMARCA2P51531 1590 aa18.58■□□□□ 0.57
SLC28A1-204ENST00000538177 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
SLC28A1-204ENST00000538177 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
SLC28A1-204ENST00000538177 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
SLC28A1-204ENST00000538177 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
SLC28A1-204ENST00000538177 ABCC8Q09428 1581 aa18.35■□□□□ 0.53
SLC28A1-204ENST00000538177 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
SLC28A1-204ENST00000538177 HRCP23327 699 aa18.25■□□□□ 0.51
SLC28A1-204ENST00000538177 TRIM26Q12899 539 aaPredicted RBP18.23■□□□□ 0.51
SLC28A1-204ENST00000538177 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
SLC28A1-204ENST00000538177 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
SLC28A1-204ENST00000538177 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
SLC28A1-204ENST00000538177 EEA1Q15075 1411 aa18.16■□□□□ 0.5
SLC28A1-204ENST00000538177 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
SLC28A1-204ENST00000538177 SOGA1O94964 1423 aa18.15■□□□□ 0.5
SLC28A1-204ENST00000538177 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
SLC28A1-204ENST00000538177 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
SLC28A1-204ENST00000538177 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
SLC28A1-204ENST00000538177 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
SLC28A1-204ENST00000538177 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
SLC28A1-204ENST00000538177 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
SLC28A1-204ENST00000538177 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
SLC28A1-204ENST00000538177 CFTRP13569 1480 aa17.92■□□□□ 0.46
SLC28A1-204ENST00000538177 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
SLC28A1-204ENST00000538177 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.45
SLC28A1-204ENST00000538177 KIF21BO75037 1637 aa17.88■□□□□ 0.45
SLC28A1-204ENST00000538177 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
SLC28A1-204ENST00000538177 CUX1P39880 1505 aa17.8■□□□□ 0.44
SLC28A1-204ENST00000538177 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
SLC28A1-204ENST00000538177 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
SLC28A1-204ENST00000538177 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
SLC28A1-204ENST00000538177 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
SLC28A1-204ENST00000538177 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
SLC28A1-204ENST00000538177 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
SLC28A1-204ENST00000538177 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
SLC28A1-204ENST00000538177 CLIP1P30622 1438 aa17.69■□□□□ 0.42
SLC28A1-204ENST00000538177 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
SLC28A1-204ENST00000538177 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
SLC28A1-204ENST00000538177 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
SLC28A1-204ENST00000538177 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
SLC28A1-204ENST00000538177 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
SLC28A1-204ENST00000538177 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
SLC28A1-204ENST00000538177 CUX2O14529 1486 aa17.52■□□□□ 0.39
SLC28A1-204ENST00000538177 IGF1RP08069 1367 aa17.5■□□□□ 0.39
SLC28A1-204ENST00000538177 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
SLC28A1-204ENST00000538177 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
SLC28A1-204ENST00000538177 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
SLC28A1-204ENST00000538177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
SLC28A1-204ENST00000538177 NESP48681 1621 aa17.45■□□□□ 0.38
SLC28A1-204ENST00000538177 APLP2Q06481 763 aa17.45■□□□□ 0.38
SLC28A1-204ENST00000538177 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
SLC28A1-204ENST00000538177 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
SLC28A1-204ENST00000538177 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
SLC28A1-204ENST00000538177 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
SLC28A1-204ENST00000538177 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
SLC28A1-204ENST00000538177 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
SLC28A1-204ENST00000538177 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
SLC28A1-204ENST00000538177 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
SLC28A1-204ENST00000538177 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
SLC28A1-204ENST00000538177 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
SLC28A1-204ENST00000538177 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
SLC28A1-204ENST00000538177 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
SLC28A1-204ENST00000538177 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
SLC28A1-204ENST00000538177 CUL7Q14999 1698 aa17.23■□□□□ 0.35
SLC28A1-204ENST00000538177 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
SLC28A1-204ENST00000538177 MAP3K1Q13233 1512 aa17.19■□□□□ 0.34
SLC28A1-204ENST00000538177 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
SLC28A1-204ENST00000538177 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
SLC28A1-204ENST00000538177 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
SLC28A1-204ENST00000538177 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
SLC28A1-204ENST00000538177 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.34
SLC28A1-204ENST00000538177 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
SLC28A1-204ENST00000538177 TIAM1Q13009 1591 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms