RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 FBLN2P98095 1184 aa23.91■■□□□ 1.42
PXN-208ENST00000538144 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
PXN-208ENST00000538144 ARHGAP35Q9NRY4 1499 aa23.86■■□□□ 1.41
PXN-208ENST00000538144 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
PXN-208ENST00000538144 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
PXN-208ENST00000538144 VPS8Q8N3P4 1428 aa23.78■■□□□ 1.4
PXN-208ENST00000538144 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
PXN-208ENST00000538144 P3H3Q8IVL6 736 aa23.77■■□□□ 1.4
PXN-208ENST00000538144 CHD1O14646 1710 aa23.77■■□□□ 1.4
PXN-208ENST00000538144 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
PXN-208ENST00000538144 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
PXN-208ENST00000538144 NUP160Q12769 1436 aa23.72■■□□□ 1.39
PXN-208ENST00000538144 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
PXN-208ENST00000538144 FHOD3Q2V2M9 1422 aa23.69■■□□□ 1.38
PXN-208ENST00000538144 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
PXN-208ENST00000538144 UGGT2Q9NYU1 1516 aa23.65■■□□□ 1.38
PXN-208ENST00000538144 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
PXN-208ENST00000538144 APLP2Q06481 763 aa23.58■■□□□ 1.37
PXN-208ENST00000538144 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
PXN-208ENST00000538144 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
PXN-208ENST00000538144 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
PXN-208ENST00000538144 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
PXN-208ENST00000538144 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
PXN-208ENST00000538144 ATP1B4Q9UN42 357 aaPredicted RBP23.51■■□□□ 1.35
PXN-208ENST00000538144 CARMIL2Q6F5E8 1435 aa23.47■■□□□ 1.35
PXN-208ENST00000538144 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
PXN-208ENST00000538144 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.34
PXN-208ENST00000538144 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
PXN-208ENST00000538144 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
PXN-208ENST00000538144 TRIM26Q12899 539 aaPredicted RBP23.44■■□□□ 1.34
PXN-208ENST00000538144 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
PXN-208ENST00000538144 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
PXN-208ENST00000538144 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
PXN-208ENST00000538144 TIAM1Q13009 1591 aa23.39■■□□□ 1.34
PXN-208ENST00000538144 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
PXN-208ENST00000538144 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
PXN-208ENST00000538144 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
PXN-208ENST00000538144 CFAP43Q8NDM7 1665 aa23.35■■□□□ 1.33
PXN-208ENST00000538144 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
PXN-208ENST00000538144 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
PXN-208ENST00000538144 RAPGEF6Q8TEU7 1601 aa23.31■■□□□ 1.32
PXN-208ENST00000538144 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
PXN-208ENST00000538144 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
PXN-208ENST00000538144 PTPRGP23470 1445 aa23.27■■□□□ 1.32
PXN-208ENST00000538144 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
PXN-208ENST00000538144 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
PXN-208ENST00000538144 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
PXN-208ENST00000538144 HRCP23327 699 aa23.24■■□□□ 1.31
PXN-208ENST00000538144 NUP153P49790 1475 aaKnown RBP23.23■■□□□ 1.31
PXN-208ENST00000538144 CDK13Q14004 1512 aaKnown RBP23.22■■□□□ 1.31
PXN-208ENST00000538144 ABCA8O94911 1581 aa23.21■■□□□ 1.31
PXN-208ENST00000538144 MTUS2Q5JR59 1369 aa23.18■■□□□ 1.3
PXN-208ENST00000538144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
PXN-208ENST00000538144 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
PXN-208ENST00000538144 MAGI3Q5TCQ9 1506 aa23.14■■□□□ 1.3
PXN-208ENST00000538144 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
PXN-208ENST00000538144 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
PXN-208ENST00000538144 PHLDB1Q86UU1 1377 aa23.08■■□□□ 1.28
PXN-208ENST00000538144 ATP10BO94823 1461 aa23.08■■□□□ 1.28
PXN-208ENST00000538144 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
PXN-208ENST00000538144 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
PXN-208ENST00000538144 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
PXN-208ENST00000538144 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
PXN-208ENST00000538144 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
PXN-208ENST00000538144 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
PXN-208ENST00000538144 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
PXN-208ENST00000538144 UHRF1BP1LA0JNW5 1464 aa22.98■■□□□ 1.27
PXN-208ENST00000538144 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
PXN-208ENST00000538144 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
PXN-208ENST00000538144 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
PXN-208ENST00000538144 ZCCHC11Q5TAX3 1644 aaKnown RBP22.92■■□□□ 1.26
PXN-208ENST00000538144 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
PXN-208ENST00000538144 KIF14Q15058 1648 aa22.91■■□□□ 1.26
PXN-208ENST00000538144 KDM5BQ9UGL1 1544 aa22.91■■□□□ 1.26
PXN-208ENST00000538144 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
PXN-208ENST00000538144 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
PXN-208ENST00000538144 ITGAEP38570 1179 aa22.87■■□□□ 1.25
PXN-208ENST00000538144 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
PXN-208ENST00000538144 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
PXN-208ENST00000538144 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
PXN-208ENST00000538144 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
PXN-208ENST00000538144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.249e-7■■■□□ 16.5
PXN-208ENST00000538144 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
PXN-208ENST00000538144 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
PXN-208ENST00000538144 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
PXN-208ENST00000538144 KCNH8Q96L42 1107 aa22.79■■□□□ 1.24
PXN-208ENST00000538144 ITSN2Q9NZM3 1697 aa22.78■■□□□ 1.24
PXN-208ENST00000538144 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
PXN-208ENST00000538144 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
PXN-208ENST00000538144 CDC42BPAQ5VT25 1732 aa22.77■■□□□ 1.24
PXN-208ENST00000538144 TCOF1Q13428 1488 aaKnown RBP22.75■■□□□ 1.23
PXN-208ENST00000538144 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
PXN-208ENST00000538144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.232e-7■■■□□ 16.2
PXN-208ENST00000538144 TTC37Q6PGP7 1564 aa22.71■■□□□ 1.23
PXN-208ENST00000538144 ZNF644Q9H582 1327 aaPredicted RBP22.71■■□□□ 1.23
PXN-208ENST00000538144 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
PXN-208ENST00000538144 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
PXN-208ENST00000538144 ASXL2Q76L83 1435 aa22.7■■□□□ 1.22
PXN-208ENST00000538144 CDC42BPBQ9Y5S2 1711 aa22.67■■□□□ 1.22
PXN-208ENST00000538144 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms