RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
GGA3-201ENST00000537686 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
GGA3-201ENST00000537686 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
GGA3-201ENST00000537686 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
GGA3-201ENST00000537686 MTUS2Q5JR59 1369 aa13.89□□□□□ -0.19
GGA3-201ENST00000537686 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
GGA3-201ENST00000537686 DDX10Q13206 875 aaKnown RBP13.88□□□□□ -0.19
GGA3-201ENST00000537686 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
GGA3-201ENST00000537686 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
GGA3-201ENST00000537686 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
GGA3-201ENST00000537686 CUX1P39880 1505 aa13.85□□□□□ -0.19
GGA3-201ENST00000537686 IGF1RP08069 1367 aa13.85□□□□□ -0.19
GGA3-201ENST00000537686 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
GGA3-201ENST00000537686 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
GGA3-201ENST00000537686 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
GGA3-201ENST00000537686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.192e-7■■■□□ 16.1
GGA3-201ENST00000537686 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
GGA3-201ENST00000537686 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
GGA3-201ENST00000537686 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
GGA3-201ENST00000537686 NEFMP07197 916 aa13.8□□□□□ -0.2
GGA3-201ENST00000537686 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
GGA3-201ENST00000537686 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
GGA3-201ENST00000537686 BCL11AQ9H165 835 aa13.79□□□□□ -0.2
GGA3-201ENST00000537686 HNRNPUQ00839 825 aaKnown RBP eCLIP13.77□□□□□ -0.2
GGA3-201ENST00000537686 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
GGA3-201ENST00000537686 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
GGA3-201ENST00000537686 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
GGA3-201ENST00000537686 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
GGA3-201ENST00000537686 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
GGA3-201ENST00000537686 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
GGA3-201ENST00000537686 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
GGA3-201ENST00000537686 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
GGA3-201ENST00000537686 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
GGA3-201ENST00000537686 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
GGA3-201ENST00000537686 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
GGA3-201ENST00000537686 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
GGA3-201ENST00000537686 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
GGA3-201ENST00000537686 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.21
GGA3-201ENST00000537686 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.211e-7■■■■□ 25.8
GGA3-201ENST00000537686 KCNH8Q96L42 1107 aa13.71□□□□□ -0.22
GGA3-201ENST00000537686 FKBP8Q14318 412 aa13.7□□□□□ -0.22
GGA3-201ENST00000537686 PLEKHD1A6NEE1 506 aa13.69□□□□□ -0.22
GGA3-201ENST00000537686 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
GGA3-201ENST00000537686 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
GGA3-201ENST00000537686 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
GGA3-201ENST00000537686 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
GGA3-201ENST00000537686 MIER1Q8N108 512 aa13.67□□□□□ -0.22
GGA3-201ENST00000537686 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
GGA3-201ENST00000537686 KIF21BO75037 1637 aa13.66□□□□□ -0.22
GGA3-201ENST00000537686 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
GGA3-201ENST00000537686 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
GGA3-201ENST00000537686 EIF4G2P78344 907 aaKnown RBP eCLIP13.63□□□□□ -0.23
GGA3-201ENST00000537686 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
GGA3-201ENST00000537686 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
GGA3-201ENST00000537686 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
GGA3-201ENST00000537686 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
GGA3-201ENST00000537686 RGL3Q3MIN7 710 aa13.6□□□□□ -0.23
GGA3-201ENST00000537686 CCNB3Q8WWL7 1395 aa13.6□□□□□ -0.23
GGA3-201ENST00000537686 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
GGA3-201ENST00000537686 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
GGA3-201ENST00000537686 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
GGA3-201ENST00000537686 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
GGA3-201ENST00000537686 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
GGA3-201ENST00000537686 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
GGA3-201ENST00000537686 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
GGA3-201ENST00000537686 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
GGA3-201ENST00000537686 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
GGA3-201ENST00000537686 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
GGA3-201ENST00000537686 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
GGA3-201ENST00000537686 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
GGA3-201ENST00000537686 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
GGA3-201ENST00000537686 CCDC136Q96JN2 1154 aa13.51□□□□□ -0.25
GGA3-201ENST00000537686 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
GGA3-201ENST00000537686 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
GGA3-201ENST00000537686 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
GGA3-201ENST00000537686 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
GGA3-201ENST00000537686 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
GGA3-201ENST00000537686 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
GGA3-201ENST00000537686 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
GGA3-201ENST00000537686 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
GGA3-201ENST00000537686 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
GGA3-201ENST00000537686 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
GGA3-201ENST00000537686 PTPRGP23470 1445 aa13.38□□□□□ -0.27
GGA3-201ENST00000537686 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
GGA3-201ENST00000537686 ARID4BQ4LE39 1312 aaPredicted RBP13.37□□□□□ -0.27
GGA3-201ENST00000537686 SETD5Q9C0A6 1442 aa13.37□□□□□ -0.27
GGA3-201ENST00000537686 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
GGA3-201ENST00000537686 PHLDB1Q86UU1 1377 aa13.36□□□□□ -0.27
GGA3-201ENST00000537686 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
GGA3-201ENST00000537686 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
GGA3-201ENST00000537686 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
GGA3-201ENST00000537686 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
GGA3-201ENST00000537686 CUL7Q14999 1698 aa13.34□□□□□ -0.27
GGA3-201ENST00000537686 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
GGA3-201ENST00000537686 EFCAB5A4FU69 1503 aa13.33□□□□□ -0.27
GGA3-201ENST00000537686 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.28
GGA3-201ENST00000537686 DCAF11Q8TEB1 546 aa13.32□□□□□ -0.28
GGA3-201ENST00000537686 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
GGA3-201ENST00000537686 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
GGA3-201ENST00000537686 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms