RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 TRIM26Q12899 539 aaPredicted RBP37.18■■■■□ 3.54
PTPMT1-205ENST00000534775 MAGI1Q96QZ7 1491 aaPredicted RBP37.17■■■■□ 3.54
PTPMT1-205ENST00000534775 EFCAB5A4FU69 1503 aa37.12■■■■□ 3.53
PTPMT1-205ENST00000534775 PCGF6Q9BYE7 350 aa37.1■■■■□ 3.53
PTPMT1-205ENST00000534775 SYNJ2O15056 1496 aa37.01■■■■□ 3.52
PTPMT1-205ENST00000534775 GRIN2AQ12879 1464 aa37■■■■□ 3.51
PTPMT1-205ENST00000534775 APLP2Q06481 763 aa36.98■■■■□ 3.51
PTPMT1-205ENST00000534775 PPARGC1BQ86YN6 1023 aaKnown RBP36.97■■■■□ 3.51
PTPMT1-205ENST00000534775 IQGAP2Q13576 1575 aa36.96■■■■□ 3.51
PTPMT1-205ENST00000534775 SAMD9Q5K651 1589 aa36.94■■■■□ 3.5
PTPMT1-205ENST00000534775 CHMP7Q8WUX9 453 aaPredicted RBP36.88■■■■□ 3.5
PTPMT1-205ENST00000534775 KIAA0586Q9BVV6 1533 aa36.85■■■■□ 3.49
PTPMT1-205ENST00000534775 FHOD3Q2V2M9 1422 aa36.84■■■■□ 3.49
PTPMT1-205ENST00000534775 P3H3Q8IVL6 736 aa36.8■■■■□ 3.48
PTPMT1-205ENST00000534775 UGGT2Q9NYU1 1516 aa36.77■■■■□ 3.48
PTPMT1-205ENST00000534775 FMN1Q68DA7 1419 aa36.77■■■■□ 3.48
PTPMT1-205ENST00000534775 CEP170Q5SW79 1584 aa36.75■■■■□ 3.47
PTPMT1-205ENST00000534775 FBLN2P98095 1184 aa36.73■■■■□ 3.47
PTPMT1-205ENST00000534775 NUP160Q12769 1436 aa36.72■■■■□ 3.47
PTPMT1-205ENST00000534775 PCF11O94913 1555 aaKnown RBP36.72■■■■□ 3.47
PTPMT1-205ENST00000534775 MAP3K1Q13233 1512 aa36.72■■■■□ 3.47
PTPMT1-205ENST00000534775 FYCO1Q9BQS8 1478 aa36.7■■■■□ 3.47
PTPMT1-205ENST00000534775 TTBK1Q5TCY1 1321 aaPredicted RBP36.69■■■■□ 3.46
PTPMT1-205ENST00000534775 CASKIN1Q8WXD9 1431 aa36.67■■■■□ 3.46
PTPMT1-205ENST00000534775 TIAM1Q13009 1591 aa36.63■■■■□ 3.45
PTPMT1-205ENST00000534775 CHD1O14646 1710 aa36.61■■■■□ 3.45
PTPMT1-205ENST00000534775 CFAP43Q8NDM7 1665 aa36.59■■■■□ 3.45
PTPMT1-205ENST00000534775 KIAA0556O60303 1618 aa36.57■■■■□ 3.45
PTPMT1-205ENST00000534775 DISP1Q96F81 1524 aa36.53■■■■□ 3.44
PTPMT1-205ENST00000534775 KANK4Q5T7N3 995 aaPredicted RBP36.49■■■■□ 3.43
PTPMT1-205ENST00000534775 ATP1B4Q9UN42 357 aaPredicted RBP36.45■■■■□ 3.43
PTPMT1-205ENST00000534775 LRRC9Q6ZRR7 1453 aa36.43■■■■□ 3.42
PTPMT1-205ENST00000534775 CARMIL2Q6F5E8 1435 aa36.42■■■■□ 3.42
PTPMT1-205ENST00000534775 JPH4Q96JJ6 628 aa36.41■■■■□ 3.42
PTPMT1-205ENST00000534775 HECW1Q76N89 1606 aa36.4■■■■□ 3.42
PTPMT1-205ENST00000534775 LRRIQ1Q96JM4 1722 aa36.35■■■■□ 3.41
PTPMT1-205ENST00000534775 CCDC18Q5T9S5 1454 aa36.34■■■■□ 3.41
PTPMT1-205ENST00000534775 SHROOM2Q13796 1616 aa36.25■■■■□ 3.39
PTPMT1-205ENST00000534775 RAPGEF6Q8TEU7 1601 aa36.24■■■■□ 3.39
PTPMT1-205ENST00000534775 RRBP1Q9P2E9 1410 aaKnown RBP36.2■■■■□ 3.38
PTPMT1-205ENST00000534775 EPRSP07814 1512 aaKnown RBP36.19■■■■□ 3.38
PTPMT1-205ENST00000534775 PRG4Q92954 1404 aaPredicted RBP36.19■■■■□ 3.38
PTPMT1-205ENST00000534775 MTUS2Q5JR59 1369 aa36.17■■■■□ 3.38
PTPMT1-205ENST00000534775 CLASP1Q7Z460 1538 aa36.16■■■■□ 3.38
PTPMT1-205ENST00000534775 EHBP1L1Q8N3D4 1523 aa36.16■■■■□ 3.38
PTPMT1-205ENST00000534775 NUP153P49790 1475 aaKnown RBP36.1■■■■□ 3.37
PTPMT1-205ENST00000534775 HRCP23327 699 aa36.09■■■■□ 3.37
PTPMT1-205ENST00000534775 CCNB3Q8WWL7 1395 aa36.08■■■■□ 3.37
PTPMT1-205ENST00000534775 SUPT6HQ7KZ85 1726 aaKnown RBP36.08■■■■□ 3.37
PTPMT1-205ENST00000534775 CDK13Q14004 1512 aaKnown RBP36.07■■■■□ 3.36
PTPMT1-205ENST00000534775 PHLDB1Q86UU1 1377 aa36.05■■■■□ 3.36
PTPMT1-205ENST00000534775 PLB1Q6P1J6 1458 aa36.04■■■■□ 3.36
PTPMT1-205ENST00000534775 ABCA8O94911 1581 aa36.03■■■■□ 3.36
PTPMT1-205ENST00000534775 MAGI3Q5TCQ9 1506 aa36■■■■□ 3.35
PTPMT1-205ENST00000534775 PTPRGP23470 1445 aa35.99■■■■□ 3.35
PTPMT1-205ENST00000534775 NCOA2Q15596 1464 aa35.96■■■■□ 3.35
PTPMT1-205ENST00000534775 HNRNPUL2Q1KMD3 747 aaKnown RBP35.96■■■■□ 3.35
PTPMT1-205ENST00000534775 ARHGEF11O15085 1522 aa35.92■■■■□ 3.34
PTPMT1-205ENST00000534775 CDK11AQ9UQ88 783 aaPredicted RBP35.92■■■■□ 3.34
PTPMT1-205ENST00000534775 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
PTPMT1-205ENST00000534775 ARID3CA6NKF2 412 aa35.88■■■■□ 3.33
PTPMT1-205ENST00000534775 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
PTPMT1-205ENST00000534775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.85■■■■□ 3.33
PTPMT1-205ENST00000534775 MYOM3Q5VTT5 1437 aa35.85■■■■□ 3.33
PTPMT1-205ENST00000534775 FGD6Q6ZV73 1430 aa35.85■■■■□ 3.33
PTPMT1-205ENST00000534775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.84■■■■□ 3.33
PTPMT1-205ENST00000534775 UACAQ9BZF9 1416 aa35.8■■■■□ 3.32
PTPMT1-205ENST00000534775 TROQ12816 1431 aaPredicted RBP35.78■■■■□ 3.32
PTPMT1-205ENST00000534775 ZEB1P37275 1124 aaPredicted RBP35.78■■■■□ 3.32
PTPMT1-205ENST00000534775 ATP10BO94823 1461 aa35.76■■■■□ 3.31
PTPMT1-205ENST00000534775 FAM50AQ14320 339 aaKnown RBP35.75■■■■□ 3.31
PTPMT1-205ENST00000534775 ADCY10Q96PN6 1610 aa35.74■■■■□ 3.31
PTPMT1-205ENST00000534775 ABCC2Q92887 1545 aa35.71■■■■□ 3.31
PTPMT1-205ENST00000534775 CCER1Q8TC90 406 aaPredicted RBP35.69■■■■□ 3.3
PTPMT1-205ENST00000534775 PTPN23Q9H3S7 1636 aa35.68■■■■□ 3.3
PTPMT1-205ENST00000534775 MIA2Q96PC5 1412 aa35.67■■■■□ 3.3
PTPMT1-205ENST00000534775 PLEKHD1A6NEE1 506 aa35.65■■■■□ 3.3
PTPMT1-205ENST00000534775 ITGAEP38570 1179 aa35.64■■■■□ 3.3
PTPMT1-205ENST00000534775 UHRF1BP1LA0JNW5 1464 aa35.63■■■■□ 3.29
PTPMT1-205ENST00000534775 TCOF1Q13428 1488 aaKnown RBP35.63■■■■□ 3.29
PTPMT1-205ENST00000534775 KIF14Q15058 1648 aa35.6■■■■□ 3.29
PTPMT1-205ENST00000534775 ITSN2Q9NZM3 1697 aa35.59■■■■□ 3.29
PTPMT1-205ENST00000534775 ZCCHC11Q5TAX3 1644 aaKnown RBP35.47■■■■□ 3.27
PTPMT1-205ENST00000534775 KDM5BQ9UGL1 1544 aa35.47■■■■□ 3.27
PTPMT1-205ENST00000534775 SETD5Q9C0A6 1442 aa35.45■■■■□ 3.26
PTPMT1-205ENST00000534775 ABCC10Q5T3U5 1492 aa35.44■■■■□ 3.26
PTPMT1-205ENST00000534775 GPATCH8Q9UKJ3 1502 aaKnown RBP35.44■■■■□ 3.26
PTPMT1-205ENST00000534775 CDC42BPAQ5VT25 1732 aa35.4■■■■□ 3.26
PTPMT1-205ENST00000534775 RAB3GAP2Q9H2M9 1393 aa35.37■■■■□ 3.25
PTPMT1-205ENST00000534775 CFDP1Q9UEE9 299 aaPredicted RBP35.36■■■■□ 3.25
PTPMT1-205ENST00000534775 PTPRKQ15262 1439 aa35.35■■■■□ 3.25
PTPMT1-205ENST00000534775 DNMT1P26358 1616 aaKnown RBP35.32■■■■□ 3.25
PTPMT1-205ENST00000534775 CAMSAP2Q08AD1 1489 aa35.32■■■■□ 3.24
PTPMT1-205ENST00000534775 HFM1A2PYH4 1435 aa35.3■■■■□ 3.24
PTPMT1-205ENST00000534775 DHX57Q6P158 1386 aaKnown RBP35.28■■■■□ 3.24
PTPMT1-205ENST00000534775 PREX2Q70Z35 1606 aa35.26■■■■□ 3.24
PTPMT1-205ENST00000534775 AKNAQ7Z591 1439 aa35.26■■■■□ 3.24
PTPMT1-205ENST00000534775 CLSPNQ9HAW4 1339 aa35.26■■■■□ 3.23
PTPMT1-205ENST00000534775 DAPK1P53355 1430 aa35.26■■■■□ 3.23
PTPMT1-205ENST00000534775 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms