RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
BEST1-208ENST00000534553 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
BEST1-208ENST00000534553 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
BEST1-208ENST00000534553 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
BEST1-208ENST00000534553 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
BEST1-208ENST00000534553 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
BEST1-208ENST00000534553 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
BEST1-208ENST00000534553 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
BEST1-208ENST00000534553 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
BEST1-208ENST00000534553 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
BEST1-208ENST00000534553 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
BEST1-208ENST00000534553 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
BEST1-208ENST00000534553 TIAM1Q13009 1591 aa20.39■□□□□ 0.86
BEST1-208ENST00000534553 CASKIN1Q8WXD9 1431 aa20.38■□□□□ 0.85
BEST1-208ENST00000534553 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
BEST1-208ENST00000534553 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
BEST1-208ENST00000534553 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
BEST1-208ENST00000534553 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
BEST1-208ENST00000534553 CFAP43Q8NDM7 1665 aa20.34■□□□□ 0.85
BEST1-208ENST00000534553 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
BEST1-208ENST00000534553 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
BEST1-208ENST00000534553 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
BEST1-208ENST00000534553 KIAA0586Q9BVV6 1533 aa20.3■□□□□ 0.84
BEST1-208ENST00000534553 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
BEST1-208ENST00000534553 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
BEST1-208ENST00000534553 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
BEST1-208ENST00000534553 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
BEST1-208ENST00000534553 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
BEST1-208ENST00000534553 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
BEST1-208ENST00000534553 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
BEST1-208ENST00000534553 CCDC18Q5T9S5 1454 aa20.19■□□□□ 0.82
BEST1-208ENST00000534553 NUP160Q12769 1436 aa20.17■□□□□ 0.82
BEST1-208ENST00000534553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
BEST1-208ENST00000534553 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
BEST1-208ENST00000534553 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
BEST1-208ENST00000534553 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
BEST1-208ENST00000534553 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
BEST1-208ENST00000534553 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
BEST1-208ENST00000534553 DISP1Q96F81 1524 aa20.12■□□□□ 0.81
BEST1-208ENST00000534553 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
BEST1-208ENST00000534553 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
BEST1-208ENST00000534553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.1■□□□□ 0.81
BEST1-208ENST00000534553 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
BEST1-208ENST00000534553 CARMIL2Q6F5E8 1435 aa20.08■□□□□ 0.8
BEST1-208ENST00000534553 LRRIQ1Q96JM4 1722 aa20.05■□□□□ 0.8
BEST1-208ENST00000534553 FBLN2P98095 1184 aa20.04■□□□□ 0.8
BEST1-208ENST00000534553 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
BEST1-208ENST00000534553 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
BEST1-208ENST00000534553 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
BEST1-208ENST00000534553 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
BEST1-208ENST00000534553 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
BEST1-208ENST00000534553 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
BEST1-208ENST00000534553 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
BEST1-208ENST00000534553 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
BEST1-208ENST00000534553 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
BEST1-208ENST00000534553 NUP153P49790 1475 aaKnown RBP19.93■□□□□ 0.78
BEST1-208ENST00000534553 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
BEST1-208ENST00000534553 MAGI3Q5TCQ9 1506 aa19.91■□□□□ 0.78
BEST1-208ENST00000534553 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
BEST1-208ENST00000534553 CHD1O14646 1710 aa19.9■□□□□ 0.78
BEST1-208ENST00000534553 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
BEST1-208ENST00000534553 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
BEST1-208ENST00000534553 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
BEST1-208ENST00000534553 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
BEST1-208ENST00000534553 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
BEST1-208ENST00000534553 TCOF1Q13428 1488 aaKnown RBP19.84■□□□□ 0.77
BEST1-208ENST00000534553 ITGAEP38570 1179 aa19.84■□□□□ 0.77
BEST1-208ENST00000534553 ABCA8O94911 1581 aa19.83■□□□□ 0.77
BEST1-208ENST00000534553 PRG4Q92954 1404 aaPredicted RBP19.83■□□□□ 0.77
BEST1-208ENST00000534553 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
BEST1-208ENST00000534553 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
BEST1-208ENST00000534553 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
BEST1-208ENST00000534553 TROQ12816 1431 aaPredicted RBP19.8■□□□□ 0.76
BEST1-208ENST00000534553 PTPRGP23470 1445 aa19.77■□□□□ 0.76
BEST1-208ENST00000534553 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.75
BEST1-208ENST00000534553 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
BEST1-208ENST00000534553 CLASP1Q7Z460 1538 aa19.74■□□□□ 0.75
BEST1-208ENST00000534553 AKNAQ7Z591 1439 aa19.73■□□□□ 0.75
BEST1-208ENST00000534553 ITSN2Q9NZM3 1697 aa19.71■□□□□ 0.75
BEST1-208ENST00000534553 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
BEST1-208ENST00000534553 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
BEST1-208ENST00000534553 ATP10BO94823 1461 aa19.69■□□□□ 0.74
BEST1-208ENST00000534553 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
BEST1-208ENST00000534553 PLEKHD1A6NEE1 506 aa19.68■□□□□ 0.74
BEST1-208ENST00000534553 PTPRKQ15262 1439 aa19.67■□□□□ 0.74
BEST1-208ENST00000534553 KIF14Q15058 1648 aa19.66■□□□□ 0.74
BEST1-208ENST00000534553 NAIPQ13075 1403 aa19.65■□□□□ 0.74
BEST1-208ENST00000534553 ROCK1Q13464 1354 aa19.62■□□□□ 0.73
BEST1-208ENST00000534553 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
BEST1-208ENST00000534553 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
BEST1-208ENST00000534553 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
BEST1-208ENST00000534553 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
BEST1-208ENST00000534553 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
BEST1-208ENST00000534553 DAPK1P53355 1430 aa19.6■□□□□ 0.73
BEST1-208ENST00000534553 UHRF1BP1LA0JNW5 1464 aa19.58■□□□□ 0.73
BEST1-208ENST00000534553 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.73
BEST1-208ENST00000534553 CFDP1Q9UEE9 299 aaPredicted RBP19.58■□□□□ 0.73
BEST1-208ENST00000534553 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
BEST1-208ENST00000534553 CAMSAP2Q08AD1 1489 aa19.57■□□□□ 0.72
BEST1-208ENST00000534553 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms