RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 EFCAB5A4FU69 1503 aa20.56■□□□□ 0.88
FOXRED1-218ENST00000534315 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
FOXRED1-218ENST00000534315 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
FOXRED1-218ENST00000534315 MAP3K1Q13233 1512 aa20.55■□□□□ 0.88
FOXRED1-218ENST00000534315 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
FOXRED1-218ENST00000534315 PCF11O94913 1555 aaKnown RBP20.54■□□□□ 0.88
FOXRED1-218ENST00000534315 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
FOXRED1-218ENST00000534315 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
FOXRED1-218ENST00000534315 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
FOXRED1-218ENST00000534315 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
FOXRED1-218ENST00000534315 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.872e-10■■■■■ 41.8
FOXRED1-218ENST00000534315 WDR62O43379 1518 aa20.45■□□□□ 0.86
FOXRED1-218ENST00000534315 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
FOXRED1-218ENST00000534315 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
FOXRED1-218ENST00000534315 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
FOXRED1-218ENST00000534315 CASKIN1Q8WXD9 1431 aa20.43■□□□□ 0.86
FOXRED1-218ENST00000534315 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
FOXRED1-218ENST00000534315 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
FOXRED1-218ENST00000534315 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
FOXRED1-218ENST00000534315 FMN1Q68DA7 1419 aa20.4■□□□□ 0.86
FOXRED1-218ENST00000534315 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
FOXRED1-218ENST00000534315 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
FOXRED1-218ENST00000534315 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
FOXRED1-218ENST00000534315 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
FOXRED1-218ENST00000534315 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
FOXRED1-218ENST00000534315 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
FOXRED1-218ENST00000534315 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
FOXRED1-218ENST00000534315 DHX57Q6P158 1386 aaKnown RBP20.29■□□□□ 0.84
FOXRED1-218ENST00000534315 ITGAEP38570 1179 aa20.29■□□□□ 0.84
FOXRED1-218ENST00000534315 LRRIQ1Q96JM4 1722 aa20.28■□□□□ 0.84
FOXRED1-218ENST00000534315 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
FOXRED1-218ENST00000534315 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
FOXRED1-218ENST00000534315 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
FOXRED1-218ENST00000534315 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
FOXRED1-218ENST00000534315 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
FOXRED1-218ENST00000534315 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
FOXRED1-218ENST00000534315 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
FOXRED1-218ENST00000534315 KIAA0586Q9BVV6 1533 aa20.15■□□□□ 0.82
FOXRED1-218ENST00000534315 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
FOXRED1-218ENST00000534315 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
FOXRED1-218ENST00000534315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.81
FOXRED1-218ENST00000534315 HECW1Q76N89 1606 aa20.14■□□□□ 0.81
FOXRED1-218ENST00000534315 EHBP1L1Q8N3D4 1523 aa20.13■□□□□ 0.81
FOXRED1-218ENST00000534315 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
FOXRED1-218ENST00000534315 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
FOXRED1-218ENST00000534315 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
FOXRED1-218ENST00000534315 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
FOXRED1-218ENST00000534315 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
FOXRED1-218ENST00000534315 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
FOXRED1-218ENST00000534315 MAGI3Q5TCQ9 1506 aa20.1■□□□□ 0.81
FOXRED1-218ENST00000534315 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
FOXRED1-218ENST00000534315 DISP1Q96F81 1524 aa20.08■□□□□ 0.81
FOXRED1-218ENST00000534315 SYNJ2O15056 1496 aa20.08■□□□□ 0.8
FOXRED1-218ENST00000534315 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
FOXRED1-218ENST00000534315 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
FOXRED1-218ENST00000534315 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
FOXRED1-218ENST00000534315 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
FOXRED1-218ENST00000534315 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
FOXRED1-218ENST00000534315 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
FOXRED1-218ENST00000534315 MAPKBP1O60336 1514 aa20.04■□□□□ 0.8
FOXRED1-218ENST00000534315 FBLN2P98095 1184 aa19.99■□□□□ 0.79
FOXRED1-218ENST00000534315 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
FOXRED1-218ENST00000534315 ARID3CA6NKF2 412 aa19.98■□□□□ 0.79
FOXRED1-218ENST00000534315 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
FOXRED1-218ENST00000534315 NUP160Q12769 1436 aa19.97■□□□□ 0.79
FOXRED1-218ENST00000534315 RAPGEF6Q8TEU7 1601 aa19.96■□□□□ 0.79
FOXRED1-218ENST00000534315 NUP153P49790 1475 aaKnown RBP19.95■□□□□ 0.78
FOXRED1-218ENST00000534315 HFM1A2PYH4 1435 aa19.92■□□□□ 0.78
FOXRED1-218ENST00000534315 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
FOXRED1-218ENST00000534315 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
FOXRED1-218ENST00000534315 NAIPQ13075 1403 aa19.87■□□□□ 0.77
FOXRED1-218ENST00000534315 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
FOXRED1-218ENST00000534315 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
FOXRED1-218ENST00000534315 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
FOXRED1-218ENST00000534315 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
FOXRED1-218ENST00000534315 UACAQ9BZF9 1416 aa19.81■□□□□ 0.76
FOXRED1-218ENST00000534315 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
FOXRED1-218ENST00000534315 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
FOXRED1-218ENST00000534315 GCC2Q8IWJ2 1684 aa19.79■□□□□ 0.76
FOXRED1-218ENST00000534315 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
FOXRED1-218ENST00000534315 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
FOXRED1-218ENST00000534315 PRG4Q92954 1404 aaPredicted RBP19.78■□□□□ 0.76
FOXRED1-218ENST00000534315 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
FOXRED1-218ENST00000534315 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
FOXRED1-218ENST00000534315 MIER1Q8N108 512 aa19.75■□□□□ 0.75
FOXRED1-218ENST00000534315 CHD1O14646 1710 aa19.75■□□□□ 0.75
FOXRED1-218ENST00000534315 ABCA8O94911 1581 aa19.75■□□□□ 0.75
FOXRED1-218ENST00000534315 ADCY10Q96PN6 1610 aa19.72■□□□□ 0.75
FOXRED1-218ENST00000534315 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
FOXRED1-218ENST00000534315 KIF14Q15058 1648 aa19.72■□□□□ 0.75
FOXRED1-218ENST00000534315 DAPK1P53355 1430 aa19.71■□□□□ 0.75
FOXRED1-218ENST00000534315 DNMT1P26358 1616 aaKnown RBP19.71■□□□□ 0.75
FOXRED1-218ENST00000534315 KDM6BO15054 1643 aa19.71■□□□□ 0.75
FOXRED1-218ENST00000534315 ZNF644Q9H582 1327 aaPredicted RBP19.7■□□□□ 0.74
FOXRED1-218ENST00000534315 ITSN2Q9NZM3 1697 aa19.69■□□□□ 0.74
FOXRED1-218ENST00000534315 ABCC5O15440 1437 aa19.68■□□□□ 0.74
FOXRED1-218ENST00000534315 ATP10BO94823 1461 aa19.66■□□□□ 0.74
FOXRED1-218ENST00000534315 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
FOXRED1-218ENST00000534315 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
FOXRED1-218ENST00000534315 CAMSAP2Q08AD1 1489 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 1071 ms