RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
CTSB-229ENST00000533572 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
CTSB-229ENST00000533572 KIAA0586Q9BVV6 1533 aa28.79■■■□□ 2.2
CTSB-229ENST00000533572 PRG4Q92954 1404 aaPredicted RBP28.79■■■□□ 2.2
CTSB-229ENST00000533572 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
CTSB-229ENST00000533572 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
CTSB-229ENST00000533572 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
CTSB-229ENST00000533572 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
CTSB-229ENST00000533572 PRXQ9BXM0 1461 aa28.55■■■□□ 2.16
CTSB-229ENST00000533572 EEA1Q15075 1411 aa28.55■■■□□ 2.16
CTSB-229ENST00000533572 CSRNP3Q8WYN3 585 aa28.53■■■□□ 2.16
CTSB-229ENST00000533572 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
CTSB-229ENST00000533572 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.14
CTSB-229ENST00000533572 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
CTSB-229ENST00000533572 PTPRGP23470 1445 aa28.44■■■□□ 2.14
CTSB-229ENST00000533572 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
CTSB-229ENST00000533572 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
CTSB-229ENST00000533572 NPM1P06748 294 aaKnown RBP eCLIP28.41■■■□□ 2.14
CTSB-229ENST00000533572 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
CTSB-229ENST00000533572 KIAA0556O60303 1618 aa28.34■■■□□ 2.13
CTSB-229ENST00000533572 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
CTSB-229ENST00000533572 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
CTSB-229ENST00000533572 UACAQ9BZF9 1416 aa28.24■■■□□ 2.11
CTSB-229ENST00000533572 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
CTSB-229ENST00000533572 KIF21BO75037 1637 aa28.22■■■□□ 2.11
CTSB-229ENST00000533572 ABCC2Q92887 1545 aa28.19■■■□□ 2.1
CTSB-229ENST00000533572 UHRF1BP1LA0JNW5 1464 aa28.19■■■□□ 2.1
CTSB-229ENST00000533572 ABCC10Q5T3U5 1492 aa28.12■■■□□ 2.09
CTSB-229ENST00000533572 FAM69CQ0P6D2 419 aa28.11■■■□□ 2.09
CTSB-229ENST00000533572 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
CTSB-229ENST00000533572 AEBP2Q6ZN18 517 aaPredicted RBP28.1■■■□□ 2.09
CTSB-229ENST00000533572 P3H3Q8IVL6 736 aa28.1■■■□□ 2.09
CTSB-229ENST00000533572 KIF13AQ9H1H9 1805 aa28.09■■■□□ 2.09
CTSB-229ENST00000533572 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
CTSB-229ENST00000533572 UBTFP17480 764 aaKnown RBP28.07■■■□□ 2.08
CTSB-229ENST00000533572 PLB1Q6P1J6 1458 aa28.07■■■□□ 2.08
CTSB-229ENST00000533572 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
CTSB-229ENST00000533572 DIP2BQ9P265 1576 aa28.06■■■□□ 2.08
CTSB-229ENST00000533572 KDM5BQ9UGL1 1544 aa28.05■■■□□ 2.08
CTSB-229ENST00000533572 ASXL2Q76L83 1435 aa28.03■■■□□ 2.08
CTSB-229ENST00000533572 ABCA8O94911 1581 aa28.02■■■□□ 2.08
CTSB-229ENST00000533572 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
CTSB-229ENST00000533572 EFCAB5A4FU69 1503 aa27.96■■■□□ 2.07
CTSB-229ENST00000533572 FHOD3Q2V2M9 1422 aa27.93■■■□□ 2.06
CTSB-229ENST00000533572 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
CTSB-229ENST00000533572 RAPGEF6Q8TEU7 1601 aa27.87■■■□□ 2.05
CTSB-229ENST00000533572 GLI2P10070 1586 aa27.86■■■□□ 2.05
CTSB-229ENST00000533572 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
CTSB-229ENST00000533572 EPRSP07814 1512 aaKnown RBP27.86■■■□□ 2.05
CTSB-229ENST00000533572 TSPOAP1O95153 1857 aa27.85■■■□□ 2.05
CTSB-229ENST00000533572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.79■■■□□ 2.04
CTSB-229ENST00000533572 HNRNPUL2Q1KMD3 747 aaKnown RBP27.79■■■□□ 2.04
CTSB-229ENST00000533572 ATP10BO94823 1461 aa27.78■■■□□ 2.04
CTSB-229ENST00000533572 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
CTSB-229ENST00000533572 ARHGAP35Q9NRY4 1499 aa27.75■■■□□ 2.03
CTSB-229ENST00000533572 NUP153P49790 1475 aaKnown RBP27.74■■■□□ 2.03
CTSB-229ENST00000533572 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
CTSB-229ENST00000533572 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
CTSB-229ENST00000533572 KDM6BO15054 1643 aa27.7■■■□□ 2.03
CTSB-229ENST00000533572 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.02
CTSB-229ENST00000533572 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
CTSB-229ENST00000533572 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
CTSB-229ENST00000533572 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
CTSB-229ENST00000533572 CD109Q6YHK3 1445 aa27.65■■■□□ 2.02
CTSB-229ENST00000533572 CFAP43Q8NDM7 1665 aa27.65■■■□□ 2.02
CTSB-229ENST00000533572 HECW1Q76N89 1606 aa27.61■■■□□ 2.01
CTSB-229ENST00000533572 PLEKHD1A6NEE1 506 aa27.61■■■□□ 2.01
CTSB-229ENST00000533572 CLIP1P30622 1438 aa27.58■■■□□ 2
CTSB-229ENST00000533572 MAGI3Q5TCQ9 1506 aa27.57■■■□□ 2
CTSB-229ENST00000533572 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
CTSB-229ENST00000533572 ABCA9Q8IUA7 1624 aa27.53■■■□□ 2
CTSB-229ENST00000533572 CDK11AQ9UQ88 783 aaPredicted RBP27.49■■□□□ 1.99
CTSB-229ENST00000533572 CEP162Q5TB80 1403 aa27.47■■□□□ 1.99
CTSB-229ENST00000533572 CASKIN1Q8WXD9 1431 aa27.45■■□□□ 1.98
CTSB-229ENST00000533572 PCF11O94913 1555 aaKnown RBP27.44■■□□□ 1.98
CTSB-229ENST00000533572 COL17A1Q9UMD9 1497 aaPredicted RBP27.43■■□□□ 1.98
CTSB-229ENST00000533572 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
CTSB-229ENST00000533572 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.98
CTSB-229ENST00000533572 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.98
CTSB-229ENST00000533572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.37■■□□□ 1.97
CTSB-229ENST00000533572 NEO1Q92859 1461 aa27.36■■□□□ 1.97
CTSB-229ENST00000533572 TROQ12816 1431 aaPredicted RBP27.34■■□□□ 1.97
CTSB-229ENST00000533572 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
CTSB-229ENST00000533572 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
CTSB-229ENST00000533572 ARAP3Q8WWN8 1544 aa27.32■■□□□ 1.96
CTSB-229ENST00000533572 KIF14Q15058 1648 aa27.32■■□□□ 1.96
CTSB-229ENST00000533572 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
CTSB-229ENST00000533572 FANCAO15360 1455 aa27.28■■□□□ 1.96
CTSB-229ENST00000533572 AKNAQ7Z591 1439 aa27.24■■□□□ 1.95
CTSB-229ENST00000533572 PLCH2O75038 1416 aa27.23■■□□□ 1.95
CTSB-229ENST00000533572 KDM4FA0A1W2PPD8 638 aa27.22■■□□□ 1.95
CTSB-229ENST00000533572 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
CTSB-229ENST00000533572 RAPGEF3O95398 923 aa27.2■■□□□ 1.94
CTSB-229ENST00000533572 DENND4BO75064 1496 aaPredicted RBP27.19■■□□□ 1.94
CTSB-229ENST00000533572 EFCAB2Q5VUJ9 269 aa27.18■■□□□ 1.94
CTSB-229ENST00000533572 ARHGAP5Q13017 1502 aa27.15■■□□□ 1.94
CTSB-229ENST00000533572 VPS8Q8N3P4 1428 aa27.15■■□□□ 1.94
CTSB-229ENST00000533572 ADGRL1O94910 1474 aa27.14■■□□□ 1.94
CTSB-229ENST00000533572 MTUS2Q5JR59 1369 aa27.13■■□□□ 1.93
CTSB-229ENST00000533572 FRMPD1Q5SYB0 1578 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms