RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
NXF1-215ENST00000533440 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
NXF1-215ENST00000533440 MAPKBP1O60336 1514 aa14.21□□□□□ -0.13
NXF1-215ENST00000533440 DIP2BQ9P265 1576 aa14.19□□□□□ -0.14
NXF1-215ENST00000533440 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
NXF1-215ENST00000533440 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
NXF1-215ENST00000533440 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
NXF1-215ENST00000533440 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
NXF1-215ENST00000533440 KDM6BO15054 1643 aa14.14□□□□□ -0.15
NXF1-215ENST00000533440 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
NXF1-215ENST00000533440 ILDR1Q86SU0 546 aaPredicted RBP14.08□□□□□ -0.16
NXF1-215ENST00000533440 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
NXF1-215ENST00000533440 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
NXF1-215ENST00000533440 IGF1RP08069 1367 aa14.02□□□□□ -0.17
NXF1-215ENST00000533440 PTPRGP23470 1445 aa13.99□□□□□ -0.17
NXF1-215ENST00000533440 GLI2P10070 1586 aa13.98□□□□□ -0.17
NXF1-215ENST00000533440 ABCC2Q92887 1545 aa13.98□□□□□ -0.17
NXF1-215ENST00000533440 CUL7Q14999 1698 aa13.98□□□□□ -0.17
NXF1-215ENST00000533440 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
NXF1-215ENST00000533440 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
NXF1-215ENST00000533440 PLB1Q6P1J6 1458 aa13.96□□□□□ -0.17
NXF1-215ENST00000533440 ASXL2Q76L83 1435 aa13.96□□□□□ -0.18
NXF1-215ENST00000533440 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.18
NXF1-215ENST00000533440 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
NXF1-215ENST00000533440 CARMIL2Q6F5E8 1435 aa13.93□□□□□ -0.18
NXF1-215ENST00000533440 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
NXF1-215ENST00000533440 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
NXF1-215ENST00000533440 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
NXF1-215ENST00000533440 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
NXF1-215ENST00000533440 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.19
NXF1-215ENST00000533440 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
NXF1-215ENST00000533440 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
NXF1-215ENST00000533440 HECW2Q9P2P5 1572 aa13.88□□□□□ -0.19
NXF1-215ENST00000533440 MAP3K4Q9Y6R4 1608 aa13.87□□□□□ -0.19
NXF1-215ENST00000533440 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
NXF1-215ENST00000533440 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
NXF1-215ENST00000533440 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
NXF1-215ENST00000533440 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
NXF1-215ENST00000533440 ZCCHC11Q5TAX3 1644 aaKnown RBP13.81□□□□□ -0.2
NXF1-215ENST00000533440 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
NXF1-215ENST00000533440 UGGT2Q9NYU1 1516 aa13.8□□□□□ -0.2
NXF1-215ENST00000533440 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
NXF1-215ENST00000533440 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
NXF1-215ENST00000533440 MAGI3Q5TCQ9 1506 aa13.74□□□□□ -0.21
NXF1-215ENST00000533440 RAPGEF2Q9Y4G8 1499 aa13.73□□□□□ -0.21
NXF1-215ENST00000533440 CD109Q6YHK3 1445 aa13.72□□□□□ -0.21
NXF1-215ENST00000533440 CFAP43Q8NDM7 1665 aa13.71□□□□□ -0.21
NXF1-215ENST00000533440 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
NXF1-215ENST00000533440 ABCA8O94911 1581 aa13.66□□□□□ -0.22
NXF1-215ENST00000533440 KIF21BO75037 1637 aa13.66□□□□□ -0.22
NXF1-215ENST00000533440 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
NXF1-215ENST00000533440 ARAP3Q8WWN8 1544 aa13.64□□□□□ -0.23
NXF1-215ENST00000533440 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
NXF1-215ENST00000533440 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
NXF1-215ENST00000533440 PTPRMP28827 1452 aa13.61□□□□□ -0.23
NXF1-215ENST00000533440 ADAMTSL3P82987 1691 aa13.6□□□□□ -0.23
NXF1-215ENST00000533440 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.23
NXF1-215ENST00000533440 ATP10BO94823 1461 aa13.55□□□□□ -0.24
NXF1-215ENST00000533440 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
NXF1-215ENST00000533440 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
NXF1-215ENST00000533440 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
NXF1-215ENST00000533440 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
NXF1-215ENST00000533440 NEO1Q92859 1461 aa13.52□□□□□ -0.25
NXF1-215ENST00000533440 LMTK3Q96Q04 1460 aa13.52□□□□□ -0.25
NXF1-215ENST00000533440 PRXQ9BXM0 1461 aa13.52□□□□□ -0.25
NXF1-215ENST00000533440 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
NXF1-215ENST00000533440 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
NXF1-215ENST00000533440 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
NXF1-215ENST00000533440 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
NXF1-215ENST00000533440 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
NXF1-215ENST00000533440 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
NXF1-215ENST00000533440 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
NXF1-215ENST00000533440 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
NXF1-215ENST00000533440 RAPGEF6Q8TEU7 1601 aa13.43□□□□□ -0.26
NXF1-215ENST00000533440 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
NXF1-215ENST00000533440 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
NXF1-215ENST00000533440 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
NXF1-215ENST00000533440 HSPA2P54652 639 aa13.41□□□□□ -0.26
NXF1-215ENST00000533440 RICTORQ6R327 1708 aa13.41□□□□□ -0.26
NXF1-215ENST00000533440 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
NXF1-215ENST00000533440 NUP153P49790 1475 aaKnown RBP13.4□□□□□ -0.26
NXF1-215ENST00000533440 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
NXF1-215ENST00000533440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
NXF1-215ENST00000533440 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
NXF1-215ENST00000533440 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NXF1-215ENST00000533440 FANCAO15360 1455 aa13.37□□□□□ -0.27
NXF1-215ENST00000533440 ZMYM4Q5VZL5 1548 aa13.37□□□□□ -0.27
NXF1-215ENST00000533440 SIGLEC1Q9BZZ2 1709 aa13.36□□□□□ -0.27
NXF1-215ENST00000533440 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
NXF1-215ENST00000533440 CFAP74Q9C0B2 1584 aa13.35□□□□□ -0.27
NXF1-215ENST00000533440 MAGI2Q86UL8 1455 aa13.35□□□□□ -0.27
NXF1-215ENST00000533440 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
NXF1-215ENST00000533440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.34□□□□□ -0.27
NXF1-215ENST00000533440 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
NXF1-215ENST00000533440 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
NXF1-215ENST00000533440 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
NXF1-215ENST00000533440 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
NXF1-215ENST00000533440 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
NXF1-215ENST00000533440 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
NXF1-215ENST00000533440 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms