RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 CHMP7Q8WUX9 453 aaPredicted RBP32.37■■■□□ 2.77
GSDMD-212ENST00000533063 ARHGAP35Q9NRY4 1499 aa32.34■■■□□ 2.77
GSDMD-212ENST00000533063 CEP170Q5SW79 1584 aa32.33■■■□□ 2.77
GSDMD-212ENST00000533063 CHD1O14646 1710 aa32.33■■■□□ 2.77
GSDMD-212ENST00000533063 FBLN2P98095 1184 aa32.3■■■□□ 2.76
GSDMD-212ENST00000533063 IQGAP2Q13576 1575 aa32.28■■■□□ 2.76
GSDMD-212ENST00000533063 NUP160Q12769 1436 aa32.28■■■□□ 2.76
GSDMD-212ENST00000533063 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
GSDMD-212ENST00000533063 KIAA0586Q9BVV6 1533 aa32.25■■■□□ 2.75
GSDMD-212ENST00000533063 EFCAB5A4FU69 1503 aa32.2■■■□□ 2.74
GSDMD-212ENST00000533063 SAMD9Q5K651 1589 aa32.19■■■□□ 2.74
GSDMD-212ENST00000533063 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
GSDMD-212ENST00000533063 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.74
GSDMD-212ENST00000533063 FHOD3Q2V2M9 1422 aa32.07■■■□□ 2.72
GSDMD-212ENST00000533063 P3H3Q8IVL6 736 aa32.07■■■□□ 2.72
GSDMD-212ENST00000533063 DISP1Q96F81 1524 aa32.02■■■□□ 2.72
GSDMD-212ENST00000533063 KIAA0556O60303 1618 aa31.97■■■□□ 2.71
GSDMD-212ENST00000533063 JPH4Q96JJ6 628 aa31.95■■■□□ 2.7
GSDMD-212ENST00000533063 CLASP1Q7Z460 1538 aa31.94■■■□□ 2.7
GSDMD-212ENST00000533063 SHROOM2Q13796 1616 aa31.92■■■□□ 2.7
GSDMD-212ENST00000533063 PCF11O94913 1555 aaKnown RBP31.89■■■□□ 2.69
GSDMD-212ENST00000533063 FMN1Q68DA7 1419 aa31.86■■■□□ 2.69
GSDMD-212ENST00000533063 PPARGC1BQ86YN6 1023 aaKnown RBP31.81■■■□□ 2.68
GSDMD-212ENST00000533063 CASKIN1Q8WXD9 1431 aa31.8■■■□□ 2.68
GSDMD-212ENST00000533063 PRG4Q92954 1404 aaPredicted RBP31.79■■■□□ 2.68
GSDMD-212ENST00000533063 CARMIL2Q6F5E8 1435 aa31.79■■■□□ 2.68
GSDMD-212ENST00000533063 FYCO1Q9BQS8 1478 aa31.78■■■□□ 2.68
GSDMD-212ENST00000533063 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
GSDMD-212ENST00000533063 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
GSDMD-212ENST00000533063 OSCARQ8IYS5 282 aa31.68■■■□□ 2.66
GSDMD-212ENST00000533063 TIAM1Q13009 1591 aa31.68■■■□□ 2.66
GSDMD-212ENST00000533063 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
GSDMD-212ENST00000533063 APLP2Q06481 763 aa31.67■■■□□ 2.66
GSDMD-212ENST00000533063 CFAP43Q8NDM7 1665 aa31.66■■■□□ 2.66
GSDMD-212ENST00000533063 TTBK1Q5TCY1 1321 aaPredicted RBP31.62■■■□□ 2.65
GSDMD-212ENST00000533063 KANK4Q5T7N3 995 aaPredicted RBP31.62■■■□□ 2.65
GSDMD-212ENST00000533063 HECW1Q76N89 1606 aa31.61■■■□□ 2.65
GSDMD-212ENST00000533063 RAPGEF6Q8TEU7 1601 aa31.61■■■□□ 2.65
GSDMD-212ENST00000533063 ATP1B4Q9UN42 357 aaPredicted RBP31.6■■■□□ 2.65
GSDMD-212ENST00000533063 PLB1Q6P1J6 1458 aa31.58■■■□□ 2.65
GSDMD-212ENST00000533063 ABCA8O94911 1581 aa31.55■■■□□ 2.64
GSDMD-212ENST00000533063 NUP153P49790 1475 aaKnown RBP31.54■■■□□ 2.64
GSDMD-212ENST00000533063 PTPRGP23470 1445 aa31.54■■■□□ 2.64
GSDMD-212ENST00000533063 EPRSP07814 1512 aaKnown RBP31.52■■■□□ 2.64
GSDMD-212ENST00000533063 LRRC9Q6ZRR7 1453 aa31.52■■■□□ 2.64
GSDMD-212ENST00000533063 CCDC18Q5T9S5 1454 aa31.49■■■□□ 2.63
GSDMD-212ENST00000533063 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
GSDMD-212ENST00000533063 CDK13Q14004 1512 aaKnown RBP31.48■■■□□ 2.63
GSDMD-212ENST00000533063 MAGI3Q5TCQ9 1506 aa31.41■■■□□ 2.62
GSDMD-212ENST00000533063 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
GSDMD-212ENST00000533063 ARID3CA6NKF2 412 aa31.38■■■□□ 2.61
GSDMD-212ENST00000533063 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
GSDMD-212ENST00000533063 ABCC2Q92887 1545 aa31.32■■■□□ 2.6
GSDMD-212ENST00000533063 EHBP1L1Q8N3D4 1523 aa31.31■■■□□ 2.6
GSDMD-212ENST00000533063 ATP10BO94823 1461 aa31.31■■■□□ 2.6
GSDMD-212ENST00000533063 MTUS2Q5JR59 1369 aa31.3■■■□□ 2.6
GSDMD-212ENST00000533063 UHRF1BP1LA0JNW5 1464 aa31.26■■■□□ 2.59
GSDMD-212ENST00000533063 ARHGEF11O15085 1522 aa31.25■■■□□ 2.59
GSDMD-212ENST00000533063 PHLDB1Q86UU1 1377 aa31.23■■■□□ 2.59
GSDMD-212ENST00000533063 SUPT6HQ7KZ85 1726 aaKnown RBP31.23■■■□□ 2.59
GSDMD-212ENST00000533063 ADCY10Q96PN6 1610 aa31.21■■■□□ 2.59
GSDMD-212ENST00000533063 NCOA2Q15596 1464 aa31.19■■■□□ 2.58
GSDMD-212ENST00000533063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
GSDMD-212ENST00000533063 HNRNPUL2Q1KMD3 747 aaKnown RBP31.19■■■□□ 2.58
GSDMD-212ENST00000533063 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
GSDMD-212ENST00000533063 KDM5BQ9UGL1 1544 aa31.15■■■□□ 2.58
GSDMD-212ENST00000533063 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
GSDMD-212ENST00000533063 ZCCHC11Q5TAX3 1644 aaKnown RBP31.14■■■□□ 2.58
GSDMD-212ENST00000533063 CDK11AQ9UQ88 783 aaPredicted RBP31.14■■■□□ 2.58
GSDMD-212ENST00000533063 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
GSDMD-212ENST00000533063 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
GSDMD-212ENST00000533063 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
GSDMD-212ENST00000533063 KIF14Q15058 1648 aa31.09■■■□□ 2.57
GSDMD-212ENST00000533063 CCNB3Q8WWL7 1395 aa31.05■■■□□ 2.56
GSDMD-212ENST00000533063 PLEKHD1A6NEE1 506 aa31.04■■■□□ 2.56
GSDMD-212ENST00000533063 MYOM3Q5VTT5 1437 aa31.03■■■□□ 2.56
GSDMD-212ENST00000533063 FGD6Q6ZV73 1430 aa31■■■□□ 2.55
GSDMD-212ENST00000533063 ABCC10Q5T3U5 1492 aa30.96■■■□□ 2.55
GSDMD-212ENST00000533063 CDC42BPAQ5VT25 1732 aa30.89■■■□□ 2.54
GSDMD-212ENST00000533063 PTPN23Q9H3S7 1636 aa30.89■■■□□ 2.54
GSDMD-212ENST00000533063 GPATCH8Q9UKJ3 1502 aaKnown RBP30.89■■■□□ 2.54
GSDMD-212ENST00000533063 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.53
GSDMD-212ENST00000533063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.53
GSDMD-212ENST00000533063 MIA2Q96PC5 1412 aa30.87■■■□□ 2.53
GSDMD-212ENST00000533063 ITSN2Q9NZM3 1697 aa30.87■■■□□ 2.53
GSDMD-212ENST00000533063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.85■■■□□ 2.53
GSDMD-212ENST00000533063 TCOF1Q13428 1488 aaKnown RBP30.85■■■□□ 2.53
GSDMD-212ENST00000533063 TTC37Q6PGP7 1564 aa30.85■■■□□ 2.53
GSDMD-212ENST00000533063 WDR7Q9Y4E6 1490 aa30.84■■■□□ 2.53
GSDMD-212ENST00000533063 FAM50AQ14320 339 aaKnown RBP30.83■■■□□ 2.53
GSDMD-212ENST00000533063 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
GSDMD-212ENST00000533063 CDC42BPBQ9Y5S2 1711 aa30.77■■■□□ 2.52
GSDMD-212ENST00000533063 KCNH8Q96L42 1107 aa30.77■■■□□ 2.52
GSDMD-212ENST00000533063 PREX2Q70Z35 1606 aa30.76■■■□□ 2.52
GSDMD-212ENST00000533063 NPM1P06748 294 aaKnown RBP eCLIP30.75■■■□□ 2.51
GSDMD-212ENST00000533063 ITGAEP38570 1179 aa30.73■■■□□ 2.51
GSDMD-212ENST00000533063 ZNF644Q9H582 1327 aaPredicted RBP30.72■■■□□ 2.51
GSDMD-212ENST00000533063 MYO5CQ9NQX4 1742 aa30.72■■■□□ 2.51
GSDMD-212ENST00000533063 CFDP1Q9UEE9 299 aaPredicted RBP30.71■■■□□ 2.51
GSDMD-212ENST00000533063 PTPRKQ15262 1439 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms