RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
SRPRA-206ENST00000532259 WDR62O43379 1518 aa23.17■■□□□ 1.3
SRPRA-206ENST00000532259 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
SRPRA-206ENST00000532259 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
SRPRA-206ENST00000532259 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
SRPRA-206ENST00000532259 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
SRPRA-206ENST00000532259 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
SRPRA-206ENST00000532259 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
SRPRA-206ENST00000532259 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
SRPRA-206ENST00000532259 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
SRPRA-206ENST00000532259 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
SRPRA-206ENST00000532259 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
SRPRA-206ENST00000532259 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
SRPRA-206ENST00000532259 EFCAB5A4FU69 1503 aa23■■□□□ 1.27
SRPRA-206ENST00000532259 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
SRPRA-206ENST00000532259 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
SRPRA-206ENST00000532259 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
SRPRA-206ENST00000532259 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
SRPRA-206ENST00000532259 LRRC9Q6ZRR7 1453 aa22.92■■□□□ 1.26
SRPRA-206ENST00000532259 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
SRPRA-206ENST00000532259 ITGAEP38570 1179 aa22.9■■□□□ 1.26
SRPRA-206ENST00000532259 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
SRPRA-206ENST00000532259 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
SRPRA-206ENST00000532259 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
SRPRA-206ENST00000532259 FMN1Q68DA7 1419 aa22.87■■□□□ 1.25
SRPRA-206ENST00000532259 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
SRPRA-206ENST00000532259 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
SRPRA-206ENST00000532259 FBLN2P98095 1184 aa22.85■■□□□ 1.25
SRPRA-206ENST00000532259 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
SRPRA-206ENST00000532259 CFAP43Q8NDM7 1665 aa22.84■■□□□ 1.25
SRPRA-206ENST00000532259 GRIN2AQ12879 1464 aa22.8■■□□□ 1.24
SRPRA-206ENST00000532259 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
SRPRA-206ENST00000532259 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
SRPRA-206ENST00000532259 ARID3CA6NKF2 412 aa22.77■■□□□ 1.24
SRPRA-206ENST00000532259 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
SRPRA-206ENST00000532259 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
SRPRA-206ENST00000532259 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
SRPRA-206ENST00000532259 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
SRPRA-206ENST00000532259 MTUS2Q5JR59 1369 aa22.7■■□□□ 1.22
SRPRA-206ENST00000532259 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
SRPRA-206ENST00000532259 CEP170Q5SW79 1584 aa22.69■■□□□ 1.22
SRPRA-206ENST00000532259 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
SRPRA-206ENST00000532259 MAGI3Q5TCQ9 1506 aa22.64■■□□□ 1.21
SRPRA-206ENST00000532259 KIAA0556O60303 1618 aa22.62■■□□□ 1.21
SRPRA-206ENST00000532259 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
SRPRA-206ENST00000532259 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
SRPRA-206ENST00000532259 EPRSP07814 1512 aaKnown RBP22.59■■□□□ 1.21
SRPRA-206ENST00000532259 NCOA2Q15596 1464 aa22.58■■□□□ 1.2
SRPRA-206ENST00000532259 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
SRPRA-206ENST00000532259 NUP160Q12769 1436 aa22.57■■□□□ 1.2
SRPRA-206ENST00000532259 HECW1Q76N89 1606 aa22.56■■□□□ 1.2
SRPRA-206ENST00000532259 FGD6Q6ZV73 1430 aa22.55■■□□□ 1.2
SRPRA-206ENST00000532259 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
SRPRA-206ENST00000532259 CCDC18Q5T9S5 1454 aa22.53■■□□□ 1.2
SRPRA-206ENST00000532259 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
SRPRA-206ENST00000532259 NUP153P49790 1475 aaKnown RBP22.49■■□□□ 1.19
SRPRA-206ENST00000532259 SUPT6HQ7KZ85 1726 aaKnown RBP22.49■■□□□ 1.19
SRPRA-206ENST00000532259 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
SRPRA-206ENST00000532259 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
SRPRA-206ENST00000532259 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
SRPRA-206ENST00000532259 PTPRKQ15262 1439 aa22.46■■□□□ 1.19
SRPRA-206ENST00000532259 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
SRPRA-206ENST00000532259 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
SRPRA-206ENST00000532259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
SRPRA-206ENST00000532259 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
SRPRA-206ENST00000532259 CHD1O14646 1710 aa22.41■■□□□ 1.18
SRPRA-206ENST00000532259 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
SRPRA-206ENST00000532259 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
SRPRA-206ENST00000532259 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
SRPRA-206ENST00000532259 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
SRPRA-206ENST00000532259 MAPKBP1O60336 1514 aa22.33■■□□□ 1.17
SRPRA-206ENST00000532259 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
SRPRA-206ENST00000532259 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
SRPRA-206ENST00000532259 ZNF644Q9H582 1327 aaPredicted RBP22.31■■□□□ 1.16
SRPRA-206ENST00000532259 RRP7BPQ9NSQ0 103 aa22.29■■□□□ 1.16
SRPRA-206ENST00000532259 CDK11AQ9UQ88 783 aaPredicted RBP22.29■■□□□ 1.16
SRPRA-206ENST00000532259 SIN3AQ96ST3 1273 aa22.26■■□□□ 1.15
SRPRA-206ENST00000532259 TCOF1Q13428 1488 aaKnown RBP22.26■■□□□ 1.15
SRPRA-206ENST00000532259 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
SRPRA-206ENST00000532259 ABCA8O94911 1581 aa22.25■■□□□ 1.15
SRPRA-206ENST00000532259 PTPRGP23470 1445 aa22.24■■□□□ 1.15
SRPRA-206ENST00000532259 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
SRPRA-206ENST00000532259 NAIPQ13075 1403 aa22.24■■□□□ 1.15
SRPRA-206ENST00000532259 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
SRPRA-206ENST00000532259 NEUROD1Q13562 356 aa22.24■■□□□ 1.15
SRPRA-206ENST00000532259 KIF14Q15058 1648 aa22.23■■□□□ 1.15
SRPRA-206ENST00000532259 MIA2Q96PC5 1412 aa22.23■■□□□ 1.15
SRPRA-206ENST00000532259 ATP10BO94823 1461 aa22.22■■□□□ 1.15
SRPRA-206ENST00000532259 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
SRPRA-206ENST00000532259 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
SRPRA-206ENST00000532259 CFDP1Q9UEE9 299 aaPredicted RBP22.16■■□□□ 1.14
SRPRA-206ENST00000532259 SHROOM2Q13796 1616 aa22.15■■□□□ 1.14
SRPRA-206ENST00000532259 GPATCH8Q9UKJ3 1502 aaKnown RBP22.14■■□□□ 1.13
SRPRA-206ENST00000532259 KDM6BO15054 1643 aa22.14■■□□□ 1.13
SRPRA-206ENST00000532259 ABCC5O15440 1437 aa22.12■■□□□ 1.13
SRPRA-206ENST00000532259 DAPK1P53355 1430 aa22.12■■□□□ 1.13
SRPRA-206ENST00000532259 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
SRPRA-206ENST00000532259 ADCY10Q96PN6 1610 aa22.08■■□□□ 1.13
SRPRA-206ENST00000532259 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
SRPRA-206ENST00000532259 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms