RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
CHMP4A-205ENST00000531158 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
CHMP4A-205ENST00000531158 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
CHMP4A-205ENST00000531158 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
CHMP4A-205ENST00000531158 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
CHMP4A-205ENST00000531158 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
CHMP4A-205ENST00000531158 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
CHMP4A-205ENST00000531158 CUL7Q14999 1698 aa16.5■□□□□ 0.23
CHMP4A-205ENST00000531158 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
CHMP4A-205ENST00000531158 TSPOAP1O95153 1857 aa16.46■□□□□ 0.22
CHMP4A-205ENST00000531158 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
CHMP4A-205ENST00000531158 IGF1RP08069 1367 aa16.43■□□□□ 0.22
CHMP4A-205ENST00000531158 KDM6BO15054 1643 aa16.41■□□□□ 0.22
CHMP4A-205ENST00000531158 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHMP4A-205ENST00000531158 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
CHMP4A-205ENST00000531158 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
CHMP4A-205ENST00000531158 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
CHMP4A-205ENST00000531158 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
CHMP4A-205ENST00000531158 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CHMP4A-205ENST00000531158 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
CHMP4A-205ENST00000531158 DISP1Q96F81 1524 aa16.27■□□□□ 0.2
CHMP4A-205ENST00000531158 GLI2P10070 1586 aa16.26■□□□□ 0.19
CHMP4A-205ENST00000531158 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
CHMP4A-205ENST00000531158 TNIKQ9UKE5 1360 aa16.24■□□□□ 0.19
CHMP4A-205ENST00000531158 UHRF1BP1LA0JNW5 1464 aa16.23■□□□□ 0.19
CHMP4A-205ENST00000531158 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
CHMP4A-205ENST00000531158 ZCCHC11Q5TAX3 1644 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-205ENST00000531158 CARMIL2Q6F5E8 1435 aa16.21■□□□□ 0.19
CHMP4A-205ENST00000531158 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
CHMP4A-205ENST00000531158 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
CHMP4A-205ENST00000531158 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
CHMP4A-205ENST00000531158 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
CHMP4A-205ENST00000531158 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
CHMP4A-205ENST00000531158 SOCS7O14512 581 aa16.07■□□□□ 0.16
CHMP4A-205ENST00000531158 ABCA8O94911 1581 aa16.06■□□□□ 0.16
CHMP4A-205ENST00000531158 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
CHMP4A-205ENST00000531158 WDR7Q9Y4E6 1490 aa16.05■□□□□ 0.16
CHMP4A-205ENST00000531158 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
CHMP4A-205ENST00000531158 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
CHMP4A-205ENST00000531158 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
CHMP4A-205ENST00000531158 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 KIF21BO75037 1637 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
CHMP4A-205ENST00000531158 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
CHMP4A-205ENST00000531158 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
CHMP4A-205ENST00000531158 ATP10BO94823 1461 aa15.87■□□□□ 0.13
CHMP4A-205ENST00000531158 KCNH8Q96L42 1107 aa15.87■□□□□ 0.13
CHMP4A-205ENST00000531158 ARAP3Q8WWN8 1544 aa15.86■□□□□ 0.13
CHMP4A-205ENST00000531158 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
CHMP4A-205ENST00000531158 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
CHMP4A-205ENST00000531158 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.13
CHMP4A-205ENST00000531158 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
CHMP4A-205ENST00000531158 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
CHMP4A-205ENST00000531158 CERKQ8TCT0 537 aa15.79■□□□□ 0.12
CHMP4A-205ENST00000531158 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-205ENST00000531158 PTPRMP28827 1452 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 SIGLEC1Q9BZZ2 1709 aa15.75■□□□□ 0.11
CHMP4A-205ENST00000531158 MADDQ8WXG6 1647 aa15.74■□□□□ 0.11
CHMP4A-205ENST00000531158 NEO1Q92859 1461 aa15.73■□□□□ 0.11
CHMP4A-205ENST00000531158 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
CHMP4A-205ENST00000531158 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
CHMP4A-205ENST00000531158 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 ARHGEF40Q8TER5 1519 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 RIMS1Q86UR5 1692 aaKnown RBP15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 HSPA2P54652 639 aa15.68■□□□□ 0.1
CHMP4A-205ENST00000531158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHMP4A-205ENST00000531158 SPATA31D1Q6ZQQ2 1576 aa15.67■□□□□ 0.1
CHMP4A-205ENST00000531158 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
CHMP4A-205ENST00000531158 ZMYM4Q5VZL5 1548 aa15.63■□□□□ 0.09
CHMP4A-205ENST00000531158 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CHMP4A-205ENST00000531158 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-205ENST00000531158 EEA1Q15075 1411 aa15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 FANCAO15360 1455 aa15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
CHMP4A-205ENST00000531158 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms