RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
SRPRA-205ENST00000531104 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
SRPRA-205ENST00000531104 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
SRPRA-205ENST00000531104 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
SRPRA-205ENST00000531104 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-205ENST00000531104 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-205ENST00000531104 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-205ENST00000531104 SAMD9Q5K651 1589 aa17.02■□□□□ 0.31
SRPRA-205ENST00000531104 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
SRPRA-205ENST00000531104 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
SRPRA-205ENST00000531104 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
SRPRA-205ENST00000531104 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
SRPRA-205ENST00000531104 IQGAP2Q13576 1575 aa16.96■□□□□ 0.31
SRPRA-205ENST00000531104 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
SRPRA-205ENST00000531104 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
SRPRA-205ENST00000531104 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
SRPRA-205ENST00000531104 APLP2Q06481 763 aa16.91■□□□□ 0.3
SRPRA-205ENST00000531104 NUP160Q12769 1436 aa16.9■□□□□ 0.3
SRPRA-205ENST00000531104 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.3
SRPRA-205ENST00000531104 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
SRPRA-205ENST00000531104 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
SRPRA-205ENST00000531104 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
SRPRA-205ENST00000531104 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
SRPRA-205ENST00000531104 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
SRPRA-205ENST00000531104 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
SRPRA-205ENST00000531104 CFAP43Q8NDM7 1665 aa16.85■□□□□ 0.29
SRPRA-205ENST00000531104 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
SRPRA-205ENST00000531104 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
SRPRA-205ENST00000531104 DISP1Q96F81 1524 aa16.82■□□□□ 0.28
SRPRA-205ENST00000531104 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
SRPRA-205ENST00000531104 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
SRPRA-205ENST00000531104 LRRC9Q6ZRR7 1453 aa16.79■□□□□ 0.28
SRPRA-205ENST00000531104 HRCP23327 699 aa16.76■□□□□ 0.27
SRPRA-205ENST00000531104 CHD1O14646 1710 aa16.75■□□□□ 0.27
SRPRA-205ENST00000531104 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
SRPRA-205ENST00000531104 RRBP1Q9P2E9 1410 aaKnown RBP16.74■□□□□ 0.27
SRPRA-205ENST00000531104 FBLN2P98095 1184 aa16.72■□□□□ 0.27
SRPRA-205ENST00000531104 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
SRPRA-205ENST00000531104 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
SRPRA-205ENST00000531104 CCDC18Q5T9S5 1454 aa16.69■□□□□ 0.26
SRPRA-205ENST00000531104 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
SRPRA-205ENST00000531104 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
SRPRA-205ENST00000531104 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
SRPRA-205ENST00000531104 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
SRPRA-205ENST00000531104 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
SRPRA-205ENST00000531104 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
SRPRA-205ENST00000531104 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
SRPRA-205ENST00000531104 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
SRPRA-205ENST00000531104 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
SRPRA-205ENST00000531104 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
SRPRA-205ENST00000531104 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
SRPRA-205ENST00000531104 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
SRPRA-205ENST00000531104 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
SRPRA-205ENST00000531104 ABCA8O94911 1581 aa16.59■□□□□ 0.25
SRPRA-205ENST00000531104 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.24
SRPRA-205ENST00000531104 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
SRPRA-205ENST00000531104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
SRPRA-205ENST00000531104 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
SRPRA-205ENST00000531104 PLB1Q6P1J6 1458 aa16.55■□□□□ 0.24
SRPRA-205ENST00000531104 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
SRPRA-205ENST00000531104 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-205ENST00000531104 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
SRPRA-205ENST00000531104 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
SRPRA-205ENST00000531104 MYOM3Q5VTT5 1437 aa16.5■□□□□ 0.23
SRPRA-205ENST00000531104 PTPRGP23470 1445 aa16.49■□□□□ 0.23
SRPRA-205ENST00000531104 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
SRPRA-205ENST00000531104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
SRPRA-205ENST00000531104 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-205ENST00000531104 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
SRPRA-205ENST00000531104 ATP10BO94823 1461 aa16.45■□□□□ 0.22
SRPRA-205ENST00000531104 TCOF1Q13428 1488 aaKnown RBP16.45■□□□□ 0.22
SRPRA-205ENST00000531104 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
SRPRA-205ENST00000531104 MIA2Q96PC5 1412 aa16.43■□□□□ 0.22
SRPRA-205ENST00000531104 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
SRPRA-205ENST00000531104 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
SRPRA-205ENST00000531104 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
SRPRA-205ENST00000531104 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
SRPRA-205ENST00000531104 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
SRPRA-205ENST00000531104 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
SRPRA-205ENST00000531104 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
SRPRA-205ENST00000531104 KIF14Q15058 1648 aa16.35■□□□□ 0.21
SRPRA-205ENST00000531104 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
SRPRA-205ENST00000531104 PTPRKQ15262 1439 aa16.34■□□□□ 0.21
SRPRA-205ENST00000531104 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
SRPRA-205ENST00000531104 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
SRPRA-205ENST00000531104 ITGAEP38570 1179 aa16.32■□□□□ 0.2
SRPRA-205ENST00000531104 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
SRPRA-205ENST00000531104 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
SRPRA-205ENST00000531104 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
SRPRA-205ENST00000531104 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
SRPRA-205ENST00000531104 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
SRPRA-205ENST00000531104 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
SRPRA-205ENST00000531104 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
SRPRA-205ENST00000531104 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
SRPRA-205ENST00000531104 AKNAQ7Z591 1439 aa16.28■□□□□ 0.2
SRPRA-205ENST00000531104 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.19
SRPRA-205ENST00000531104 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
SRPRA-205ENST00000531104 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.19
SRPRA-205ENST00000531104 NAIPQ13075 1403 aa16.24■□□□□ 0.19
SRPRA-205ENST00000531104 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms