RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
RPUSD4-205ENST00000530903 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-205ENST00000530903 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
RPUSD4-205ENST00000530903 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
RPUSD4-205ENST00000530903 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.23
RPUSD4-205ENST00000530903 KIF27Q86VH2 1401 aa16.52■□□□□ 0.23
RPUSD4-205ENST00000530903 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
RPUSD4-205ENST00000530903 EEA1Q15075 1411 aa16.49■□□□□ 0.23
RPUSD4-205ENST00000530903 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
RPUSD4-205ENST00000530903 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
RPUSD4-205ENST00000530903 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.22
RPUSD4-205ENST00000530903 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPUSD4-205ENST00000530903 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
RPUSD4-205ENST00000530903 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
RPUSD4-205ENST00000530903 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
RPUSD4-205ENST00000530903 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
RPUSD4-205ENST00000530903 ABCB7O75027 752 aa16.43■□□□□ 0.22
RPUSD4-205ENST00000530903 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
RPUSD4-205ENST00000530903 IGF1RP08069 1367 aa16.39■□□□□ 0.21
RPUSD4-205ENST00000530903 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
RPUSD4-205ENST00000530903 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
RPUSD4-205ENST00000530903 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
RPUSD4-205ENST00000530903 CUL7Q14999 1698 aa16.35■□□□□ 0.21
RPUSD4-205ENST00000530903 KIF21BO75037 1637 aa16.34■□□□□ 0.21
RPUSD4-205ENST00000530903 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
RPUSD4-205ENST00000530903 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
RPUSD4-205ENST00000530903 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
RPUSD4-205ENST00000530903 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
RPUSD4-205ENST00000530903 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
RPUSD4-205ENST00000530903 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
RPUSD4-205ENST00000530903 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
RPUSD4-205ENST00000530903 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
RPUSD4-205ENST00000530903 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
RPUSD4-205ENST00000530903 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
RPUSD4-205ENST00000530903 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
RPUSD4-205ENST00000530903 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
RPUSD4-205ENST00000530903 FBLN2P98095 1184 aa16.19■□□□□ 0.18
RPUSD4-205ENST00000530903 CHD1O14646 1710 aa16.18■□□□□ 0.18
RPUSD4-205ENST00000530903 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
RPUSD4-205ENST00000530903 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
RPUSD4-205ENST00000530903 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
RPUSD4-205ENST00000530903 CTTNBP2Q8WZ74 1663 aa16.15■□□□□ 0.18
RPUSD4-205ENST00000530903 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
RPUSD4-205ENST00000530903 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
RPUSD4-205ENST00000530903 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
RPUSD4-205ENST00000530903 POLA2Q14181 598 aa16.06■□□□□ 0.16
RPUSD4-205ENST00000530903 NUP160Q12769 1436 aa16.05■□□□□ 0.16
RPUSD4-205ENST00000530903 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
RPUSD4-205ENST00000530903 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
RPUSD4-205ENST00000530903 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
RPUSD4-205ENST00000530903 CLIP1P30622 1438 aa16■□□□□ 0.15
RPUSD4-205ENST00000530903 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
RPUSD4-205ENST00000530903 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
RPUSD4-205ENST00000530903 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
RPUSD4-205ENST00000530903 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
RPUSD4-205ENST00000530903 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
RPUSD4-205ENST00000530903 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
RPUSD4-205ENST00000530903 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
RPUSD4-205ENST00000530903 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
RPUSD4-205ENST00000530903 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
RPUSD4-205ENST00000530903 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
RPUSD4-205ENST00000530903 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
RPUSD4-205ENST00000530903 KIAA0556O60303 1618 aa15.89■□□□□ 0.13
RPUSD4-205ENST00000530903 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
RPUSD4-205ENST00000530903 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
RPUSD4-205ENST00000530903 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
RPUSD4-205ENST00000530903 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
RPUSD4-205ENST00000530903 HAX1O00165 279 aa15.87■□□□□ 0.13
RPUSD4-205ENST00000530903 LHX8Q68G74 356 aa15.87■□□□□ 0.13
RPUSD4-205ENST00000530903 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
RPUSD4-205ENST00000530903 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
RPUSD4-205ENST00000530903 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
RPUSD4-205ENST00000530903 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.12
RPUSD4-205ENST00000530903 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
RPUSD4-205ENST00000530903 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
RPUSD4-205ENST00000530903 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.11
RPUSD4-205ENST00000530903 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
RPUSD4-205ENST00000530903 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
RPUSD4-205ENST00000530903 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
RPUSD4-205ENST00000530903 PTPRGP23470 1445 aa15.71■□□□□ 0.1
RPUSD4-205ENST00000530903 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
RPUSD4-205ENST00000530903 FYCO1Q9BQS8 1478 aa15.7■□□□□ 0.1
RPUSD4-205ENST00000530903 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
RPUSD4-205ENST00000530903 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
RPUSD4-205ENST00000530903 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
RPUSD4-205ENST00000530903 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
RPUSD4-205ENST00000530903 LRRIQ1Q96JM4 1722 aa15.68■□□□□ 0.1
RPUSD4-205ENST00000530903 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
RPUSD4-205ENST00000530903 ABCA8O94911 1581 aa15.67■□□□□ 0.1
RPUSD4-205ENST00000530903 RIMBP3CA6NJZ7 1639 aa15.66■□□□□ 0.1
RPUSD4-205ENST00000530903 RIMBP3BA6NNM3 1639 aa15.66■□□□□ 0.1
RPUSD4-205ENST00000530903 RIMBP3Q9UFD9 1639 aa15.66■□□□□ 0.1
RPUSD4-205ENST00000530903 CFAP43Q8NDM7 1665 aa15.63■□□□□ 0.09
RPUSD4-205ENST00000530903 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-205ENST00000530903 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
RPUSD4-205ENST00000530903 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
RPUSD4-205ENST00000530903 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
RPUSD4-205ENST00000530903 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
RPUSD4-205ENST00000530903 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
RPUSD4-205ENST00000530903 PIP4P2Q8N4L2 257 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms