RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
C11orf54-209ENST00000530620 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
C11orf54-209ENST00000530620 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
C11orf54-209ENST00000530620 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
C11orf54-209ENST00000530620 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
C11orf54-209ENST00000530620 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
C11orf54-209ENST00000530620 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
C11orf54-209ENST00000530620 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
C11orf54-209ENST00000530620 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
C11orf54-209ENST00000530620 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
C11orf54-209ENST00000530620 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
C11orf54-209ENST00000530620 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
C11orf54-209ENST00000530620 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
C11orf54-209ENST00000530620 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
C11orf54-209ENST00000530620 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
C11orf54-209ENST00000530620 NUP160Q12769 1436 aa19.06■□□□□ 0.64
C11orf54-209ENST00000530620 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
C11orf54-209ENST00000530620 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
C11orf54-209ENST00000530620 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
C11orf54-209ENST00000530620 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
C11orf54-209ENST00000530620 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
C11orf54-209ENST00000530620 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
C11orf54-209ENST00000530620 CUL7Q14999 1698 aa18.84■□□□□ 0.61
C11orf54-209ENST00000530620 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
C11orf54-209ENST00000530620 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
C11orf54-209ENST00000530620 ADCY10Q96PN6 1610 aa18.74■□□□□ 0.59
C11orf54-209ENST00000530620 IGF1RP08069 1367 aa18.72■□□□□ 0.59
C11orf54-209ENST00000530620 KIAA0586Q9BVV6 1533 aa18.72■□□□□ 0.59
C11orf54-209ENST00000530620 MAPKBP1O60336 1514 aa18.68■□□□□ 0.58
C11orf54-209ENST00000530620 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
C11orf54-209ENST00000530620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
C11orf54-209ENST00000530620 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
C11orf54-209ENST00000530620 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
C11orf54-209ENST00000530620 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
C11orf54-209ENST00000530620 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
C11orf54-209ENST00000530620 TSPOAP1O95153 1857 aa18.58■□□□□ 0.57
C11orf54-209ENST00000530620 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
C11orf54-209ENST00000530620 FAM69CQ0P6D2 419 aa18.54■□□□□ 0.56
C11orf54-209ENST00000530620 PTPRGP23470 1445 aa18.52■□□□□ 0.56
C11orf54-209ENST00000530620 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
C11orf54-209ENST00000530620 KDM6BO15054 1643 aa18.5■□□□□ 0.55
C11orf54-209ENST00000530620 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
C11orf54-209ENST00000530620 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
C11orf54-209ENST00000530620 ABCC2Q92887 1545 aa18.49■□□□□ 0.55
C11orf54-209ENST00000530620 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
C11orf54-209ENST00000530620 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
C11orf54-209ENST00000530620 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
C11orf54-209ENST00000530620 KIAA0556O60303 1618 aa18.46■□□□□ 0.55
C11orf54-209ENST00000530620 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
C11orf54-209ENST00000530620 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
C11orf54-209ENST00000530620 PPRC1Q5VV67 1664 aaKnown RBP18.46■□□□□ 0.55
C11orf54-209ENST00000530620 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
C11orf54-209ENST00000530620 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
C11orf54-209ENST00000530620 ZCCHC11Q5TAX3 1644 aaKnown RBP18.41■□□□□ 0.54
C11orf54-209ENST00000530620 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
C11orf54-209ENST00000530620 GLI2P10070 1586 aa18.4■□□□□ 0.54
C11orf54-209ENST00000530620 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
C11orf54-209ENST00000530620 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
C11orf54-209ENST00000530620 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
C11orf54-209ENST00000530620 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
C11orf54-209ENST00000530620 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
C11orf54-209ENST00000530620 ZBTB22O15209 634 aa18.31■□□□□ 0.52
C11orf54-209ENST00000530620 EPRSP07814 1512 aaKnown RBP18.31■□□□□ 0.52
C11orf54-209ENST00000530620 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
C11orf54-209ENST00000530620 ABCA8O94911 1581 aa18.27■□□□□ 0.52
C11orf54-209ENST00000530620 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
C11orf54-209ENST00000530620 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
C11orf54-209ENST00000530620 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
C11orf54-209ENST00000530620 WDR7Q9Y4E6 1490 aa18.24■□□□□ 0.51
C11orf54-209ENST00000530620 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
C11orf54-209ENST00000530620 TEX14Q8IWB6 1497 aa18.21■□□□□ 0.51
C11orf54-209ENST00000530620 COL17A1Q9UMD9 1497 aaPredicted RBP18.21■□□□□ 0.51
C11orf54-209ENST00000530620 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
C11orf54-209ENST00000530620 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
C11orf54-209ENST00000530620 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
C11orf54-209ENST00000530620 ADGRL1O94910 1474 aa18.14■□□□□ 0.5
C11orf54-209ENST00000530620 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
C11orf54-209ENST00000530620 MAGI3Q5TCQ9 1506 aa18.11■□□□□ 0.49
C11orf54-209ENST00000530620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
C11orf54-209ENST00000530620 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
C11orf54-209ENST00000530620 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
C11orf54-209ENST00000530620 CD109Q6YHK3 1445 aa18.08■□□□□ 0.49
C11orf54-209ENST00000530620 CACNB1Q02641 598 aaPredicted RBP18.06■□□□□ 0.48
C11orf54-209ENST00000530620 ATP10BO94823 1461 aa18.06■□□□□ 0.48
C11orf54-209ENST00000530620 P3H3Q8IVL6 736 aa18.05■□□□□ 0.48
C11orf54-209ENST00000530620 KCNH8Q96L42 1107 aa18.05■□□□□ 0.48
C11orf54-209ENST00000530620 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
C11orf54-209ENST00000530620 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
C11orf54-209ENST00000530620 KIF21BO75037 1637 aa18.04■□□□□ 0.48
C11orf54-209ENST00000530620 EEA1Q15075 1411 aa18.02■□□□□ 0.48
C11orf54-209ENST00000530620 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
C11orf54-209ENST00000530620 ARAP3Q8WWN8 1544 aa17.98■□□□□ 0.47
C11orf54-209ENST00000530620 NUP153P49790 1475 aaKnown RBP17.97■□□□□ 0.47
C11orf54-209ENST00000530620 FHOD3Q2V2M9 1422 aa17.97■□□□□ 0.47
C11orf54-209ENST00000530620 HECW2Q9P2P5 1572 aa17.95■□□□□ 0.46
C11orf54-209ENST00000530620 APLP2Q06481 763 aa17.94■□□□□ 0.46
C11orf54-209ENST00000530620 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
C11orf54-209ENST00000530620 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
C11orf54-209ENST00000530620 FRMPD1Q5SYB0 1578 aa17.92■□□□□ 0.46
C11orf54-209ENST00000530620 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms