RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
C11orf54-209ENST00000530620 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
C11orf54-209ENST00000530620 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
C11orf54-209ENST00000530620 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
C11orf54-209ENST00000530620 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
C11orf54-209ENST00000530620 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
C11orf54-209ENST00000530620 ABCC9O60706 1549 aa24.19■■□□□ 1.46
C11orf54-209ENST00000530620 PLPPR3Q6T4P5 718 aa23.33■■□□□ 1.33
C11orf54-209ENST00000530620 FOXD1Q16676 465 aa23.31■■□□□ 1.32
C11orf54-209ENST00000530620 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
C11orf54-209ENST00000530620 NACADO15069 1562 aa22.87■■□□□ 1.25
C11orf54-209ENST00000530620 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
C11orf54-209ENST00000530620 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
C11orf54-209ENST00000530620 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
C11orf54-209ENST00000530620 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
C11orf54-209ENST00000530620 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
C11orf54-209ENST00000530620 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
C11orf54-209ENST00000530620 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
C11orf54-209ENST00000530620 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
C11orf54-209ENST00000530620 ADRA2BP18089 450 aa22.3■■□□□ 1.16
C11orf54-209ENST00000530620 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
C11orf54-209ENST00000530620 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
C11orf54-209ENST00000530620 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
C11orf54-209ENST00000530620 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
C11orf54-209ENST00000530620 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
C11orf54-209ENST00000530620 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
C11orf54-209ENST00000530620 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
C11orf54-209ENST00000530620 MSH5O43196 834 aa21.57■■□□□ 1.04
C11orf54-209ENST00000530620 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
C11orf54-209ENST00000530620 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
C11orf54-209ENST00000530620 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
C11orf54-209ENST00000530620 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
C11orf54-209ENST00000530620 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
C11orf54-209ENST00000530620 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
C11orf54-209ENST00000530620 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
C11orf54-209ENST00000530620 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
C11orf54-209ENST00000530620 CUX2O14529 1486 aa20.84■□□□□ 0.93
C11orf54-209ENST00000530620 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.93
C11orf54-209ENST00000530620 NESP48681 1621 aa20.79■□□□□ 0.92
C11orf54-209ENST00000530620 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
C11orf54-209ENST00000530620 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
C11orf54-209ENST00000530620 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
C11orf54-209ENST00000530620 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
C11orf54-209ENST00000530620 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
C11orf54-209ENST00000530620 WIZO95785 1651 aa20.58■□□□□ 0.88
C11orf54-209ENST00000530620 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
C11orf54-209ENST00000530620 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
C11orf54-209ENST00000530620 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
C11orf54-209ENST00000530620 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
C11orf54-209ENST00000530620 MRC2Q9UBG0 1479 aa20.33■□□□□ 0.85
C11orf54-209ENST00000530620 WDR62O43379 1518 aa20.32■□□□□ 0.84
C11orf54-209ENST00000530620 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
C11orf54-209ENST00000530620 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
C11orf54-209ENST00000530620 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
C11orf54-209ENST00000530620 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
C11orf54-209ENST00000530620 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
C11orf54-209ENST00000530620 CFTRP13569 1480 aa20.2■□□□□ 0.82
C11orf54-209ENST00000530620 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
C11orf54-209ENST00000530620 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
C11orf54-209ENST00000530620 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
C11orf54-209ENST00000530620 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
C11orf54-209ENST00000530620 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
C11orf54-209ENST00000530620 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
C11orf54-209ENST00000530620 KCNA4P22459 653 aa19.91■□□□□ 0.78
C11orf54-209ENST00000530620 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
C11orf54-209ENST00000530620 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
C11orf54-209ENST00000530620 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
C11orf54-209ENST00000530620 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
C11orf54-209ENST00000530620 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
C11orf54-209ENST00000530620 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
C11orf54-209ENST00000530620 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
C11orf54-209ENST00000530620 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
C11orf54-209ENST00000530620 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
C11orf54-209ENST00000530620 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
C11orf54-209ENST00000530620 RIMBP3CA6NJZ7 1639 aa19.71■□□□□ 0.75
C11orf54-209ENST00000530620 RIMBP3BA6NNM3 1639 aa19.71■□□□□ 0.75
C11orf54-209ENST00000530620 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
C11orf54-209ENST00000530620 CHD1O14646 1710 aa19.7■□□□□ 0.74
C11orf54-209ENST00000530620 NPM3O75607 178 aaKnown RBP19.66■□□□□ 0.74
C11orf54-209ENST00000530620 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
C11orf54-209ENST00000530620 RNF216Q9NWF9 866 aaPredicted RBP19.62■□□□□ 0.73
C11orf54-209ENST00000530620 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
C11orf54-209ENST00000530620 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
C11orf54-209ENST00000530620 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
C11orf54-209ENST00000530620 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
C11orf54-209ENST00000530620 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
C11orf54-209ENST00000530620 CUX1P39880 1505 aa19.52■□□□□ 0.72
C11orf54-209ENST00000530620 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
C11orf54-209ENST00000530620 SOGA1O94964 1423 aa19.49■□□□□ 0.71
C11orf54-209ENST00000530620 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
C11orf54-209ENST00000530620 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
C11orf54-209ENST00000530620 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
C11orf54-209ENST00000530620 FBLN2P98095 1184 aa19.42■□□□□ 0.7
C11orf54-209ENST00000530620 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
C11orf54-209ENST00000530620 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
C11orf54-209ENST00000530620 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
C11orf54-209ENST00000530620 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
C11orf54-209ENST00000530620 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
C11orf54-209ENST00000530620 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
C11orf54-209ENST00000530620 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms