RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
RDX-209ENST00000530131 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
RDX-209ENST00000530131 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
RDX-209ENST00000530131 EFCAB5A4FU69 1503 aa24.05■■□□□ 1.44
RDX-209ENST00000530131 IQGAP2Q13576 1575 aa24.01■■□□□ 1.43
RDX-209ENST00000530131 SAMD9Q5K651 1589 aa24■■□□□ 1.43
RDX-209ENST00000530131 CEP170Q5SW79 1584 aa23.96■■□□□ 1.43
RDX-209ENST00000530131 KIAA0586Q9BVV6 1533 aa23.95■■□□□ 1.42
RDX-209ENST00000530131 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
RDX-209ENST00000530131 NUP160Q12769 1436 aa23.93■■□□□ 1.42
RDX-209ENST00000530131 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
RDX-209ENST00000530131 UGGT2Q9NYU1 1516 aa23.91■■□□□ 1.42
RDX-209ENST00000530131 CHD1O14646 1710 aa23.89■■□□□ 1.41
RDX-209ENST00000530131 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
RDX-209ENST00000530131 FBLN2P98095 1184 aa23.85■■□□□ 1.41
RDX-209ENST00000530131 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
RDX-209ENST00000530131 P3H3Q8IVL6 736 aa23.84■■□□□ 1.41
RDX-209ENST00000530131 PCF11O94913 1555 aaKnown RBP23.83■■□□□ 1.4
RDX-209ENST00000530131 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
RDX-209ENST00000530131 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
RDX-209ENST00000530131 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
RDX-209ENST00000530131 KIAA0556O60303 1618 aa23.78■■□□□ 1.4
RDX-209ENST00000530131 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
RDX-209ENST00000530131 CASKIN1Q8WXD9 1431 aa23.76■■□□□ 1.39
RDX-209ENST00000530131 MAP3K1Q13233 1512 aa23.75■■□□□ 1.39
RDX-209ENST00000530131 APLP2Q06481 763 aa23.74■■□□□ 1.39
RDX-209ENST00000530131 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
RDX-209ENST00000530131 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
RDX-209ENST00000530131 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
RDX-209ENST00000530131 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
RDX-209ENST00000530131 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
RDX-209ENST00000530131 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
RDX-209ENST00000530131 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
RDX-209ENST00000530131 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
RDX-209ENST00000530131 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
RDX-209ENST00000530131 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
RDX-209ENST00000530131 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
RDX-209ENST00000530131 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
RDX-209ENST00000530131 RAPGEF6Q8TEU7 1601 aa23.53■■□□□ 1.36
RDX-209ENST00000530131 ATP1B4Q9UN42 357 aaPredicted RBP23.53■■□□□ 1.36
RDX-209ENST00000530131 CCDC18Q5T9S5 1454 aa23.52■■□□□ 1.36
RDX-209ENST00000530131 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
RDX-209ENST00000530131 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
RDX-209ENST00000530131 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
RDX-209ENST00000530131 PLB1Q6P1J6 1458 aa23.45■■□□□ 1.34
RDX-209ENST00000530131 ABCA8O94911 1581 aa23.45■■□□□ 1.34
RDX-209ENST00000530131 CDK13Q14004 1512 aaKnown RBP23.44■■□□□ 1.34
RDX-209ENST00000530131 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
RDX-209ENST00000530131 EHBP1L1Q8N3D4 1523 aa23.42■■□□□ 1.34
RDX-209ENST00000530131 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
RDX-209ENST00000530131 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
RDX-209ENST00000530131 PTPRGP23470 1445 aa23.38■■□□□ 1.33
RDX-209ENST00000530131 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
RDX-209ENST00000530131 SUPT6HQ7KZ85 1726 aaKnown RBP23.35■■□□□ 1.33
RDX-209ENST00000530131 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
RDX-209ENST00000530131 NCOA2Q15596 1464 aa23.31■■□□□ 1.32
RDX-209ENST00000530131 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
RDX-209ENST00000530131 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
RDX-209ENST00000530131 ARID3CA6NKF2 412 aa23.29■■□□□ 1.32
RDX-209ENST00000530131 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
RDX-209ENST00000530131 ATP10BO94823 1461 aa23.25■■□□□ 1.31
RDX-209ENST00000530131 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
RDX-209ENST00000530131 MYOM3Q5VTT5 1437 aa23.21■■□□□ 1.31
RDX-209ENST00000530131 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
RDX-209ENST00000530131 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
RDX-209ENST00000530131 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
RDX-209ENST00000530131 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
RDX-209ENST00000530131 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
RDX-209ENST00000530131 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
RDX-209ENST00000530131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
RDX-209ENST00000530131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
RDX-209ENST00000530131 KIF14Q15058 1648 aa23.14■■□□□ 1.3
RDX-209ENST00000530131 PTPN23Q9H3S7 1636 aa23.11■■□□□ 1.29
RDX-209ENST00000530131 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
RDX-209ENST00000530131 TCOF1Q13428 1488 aaKnown RBP23.09■■□□□ 1.29
RDX-209ENST00000530131 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
RDX-209ENST00000530131 HRCP23327 699 aa23.09■■□□□ 1.29
RDX-209ENST00000530131 MIA2Q96PC5 1412 aa23.08■■□□□ 1.29
RDX-209ENST00000530131 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
RDX-209ENST00000530131 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
RDX-209ENST00000530131 ABCC10Q5T3U5 1492 aa23.06■■□□□ 1.28
RDX-209ENST00000530131 ITSN2Q9NZM3 1697 aa23.05■■□□□ 1.28
RDX-209ENST00000530131 GPATCH8Q9UKJ3 1502 aaKnown RBP23.01■■□□□ 1.27
RDX-209ENST00000530131 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
RDX-209ENST00000530131 ITGAEP38570 1179 aa22.99■■□□□ 1.27
RDX-209ENST00000530131 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
RDX-209ENST00000530131 TTC37Q6PGP7 1564 aa22.93■■□□□ 1.26
RDX-209ENST00000530131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
RDX-209ENST00000530131 PREX2Q70Z35 1606 aa22.91■■□□□ 1.26
RDX-209ENST00000530131 CAMSAP2Q08AD1 1489 aa22.9■■□□□ 1.26
RDX-209ENST00000530131 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
RDX-209ENST00000530131 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.26
RDX-209ENST00000530131 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.26
RDX-209ENST00000530131 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.26
RDX-209ENST00000530131 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.25
RDX-209ENST00000530131 CFDP1Q9UEE9 299 aaPredicted RBP22.88■■□□□ 1.25
RDX-209ENST00000530131 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
RDX-209ENST00000530131 SETD5Q9C0A6 1442 aa22.87■■□□□ 1.25
RDX-209ENST00000530131 ZNF644Q9H582 1327 aaPredicted RBP22.87■■□□□ 1.25
RDX-209ENST00000530131 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms