RNA–Protein interactions for RNA: ENST00000528487.1

SYVN1-210, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-210ENST00000528487 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
SYVN1-210ENST00000528487 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
SYVN1-210ENST00000528487 KIAA0586Q9BVV6 1533 aa23.23■■□□□ 1.31
SYVN1-210ENST00000528487 JPH4Q96JJ6 628 aa23.21■■□□□ 1.31
SYVN1-210ENST00000528487 SHROOM2Q13796 1616 aa23.16■■□□□ 1.3
SYVN1-210ENST00000528487 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
SYVN1-210ENST00000528487 CYB5RLQ6IPT4 315 aa23.12■■□□□ 1.29
SYVN1-210ENST00000528487 ARAP1Q96P48 1450 aa23.1■■□□□ 1.29
SYVN1-210ENST00000528487 IQGAP2Q13576 1575 aa23.09■■□□□ 1.29
SYVN1-210ENST00000528487 ERCC6L2Q5T890 1561 aa23.09■■□□□ 1.29
SYVN1-210ENST00000528487 KIF21BO75037 1637 aa23.04■■□□□ 1.28
SYVN1-210ENST00000528487 CTTNBP2Q8WZ74 1663 aa23■■□□□ 1.27
SYVN1-210ENST00000528487 CARMIL2Q6F5E8 1435 aa22.99■■□□□ 1.27
SYVN1-210ENST00000528487 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
SYVN1-210ENST00000528487 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
SYVN1-210ENST00000528487 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
SYVN1-210ENST00000528487 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
SYVN1-210ENST00000528487 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
SYVN1-210ENST00000528487 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
SYVN1-210ENST00000528487 PTPRGP23470 1445 aa22.89■■□□□ 1.25
SYVN1-210ENST00000528487 TTBK1Q5TCY1 1321 aaPredicted RBP22.85■■□□□ 1.25
SYVN1-210ENST00000528487 KIAA0556O60303 1618 aa22.85■■□□□ 1.25
SYVN1-210ENST00000528487 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.25
SYVN1-210ENST00000528487 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
SYVN1-210ENST00000528487 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
SYVN1-210ENST00000528487 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
SYVN1-210ENST00000528487 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
SYVN1-210ENST00000528487 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
SYVN1-210ENST00000528487 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
SYVN1-210ENST00000528487 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
SYVN1-210ENST00000528487 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
SYVN1-210ENST00000528487 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
SYVN1-210ENST00000528487 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
SYVN1-210ENST00000528487 ABCC2Q92887 1545 aa22.64■■□□□ 1.21
SYVN1-210ENST00000528487 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
SYVN1-210ENST00000528487 ABCA8O94911 1581 aa22.6■■□□□ 1.21
SYVN1-210ENST00000528487 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
SYVN1-210ENST00000528487 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
SYVN1-210ENST00000528487 CLIP1P30622 1438 aa22.57■■□□□ 1.2
SYVN1-210ENST00000528487 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
SYVN1-210ENST00000528487 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
SYVN1-210ENST00000528487 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
SYVN1-210ENST00000528487 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
SYVN1-210ENST00000528487 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
SYVN1-210ENST00000528487 ZCCHC11Q5TAX3 1644 aaKnown RBP22.48■■□□□ 1.19
SYVN1-210ENST00000528487 ASXL2Q76L83 1435 aa22.48■■□□□ 1.19
SYVN1-210ENST00000528487 ATP10BO94823 1461 aa22.46■■□□□ 1.19
SYVN1-210ENST00000528487 NUP153P49790 1475 aaKnown RBP22.45■■□□□ 1.18
SYVN1-210ENST00000528487 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
SYVN1-210ENST00000528487 FAM69CQ0P6D2 419 aa22.43■■□□□ 1.18
SYVN1-210ENST00000528487 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
SYVN1-210ENST00000528487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.41■■□□□ 1.18
SYVN1-210ENST00000528487 HNRNPUL2Q1KMD3 747 aaKnown RBP22.41■■□□□ 1.18
SYVN1-210ENST00000528487 WDR7Q9Y4E6 1490 aa22.38■■□□□ 1.17
SYVN1-210ENST00000528487 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
SYVN1-210ENST00000528487 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
SYVN1-210ENST00000528487 KIF13AQ9H1H9 1805 aa22.35■■□□□ 1.17
SYVN1-210ENST00000528487 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
SYVN1-210ENST00000528487 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
SYVN1-210ENST00000528487 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
SYVN1-210ENST00000528487 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
SYVN1-210ENST00000528487 CDK13Q14004 1512 aaKnown RBP22.31■■□□□ 1.16
SYVN1-210ENST00000528487 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
SYVN1-210ENST00000528487 GLI2P10070 1586 aa22.29■■□□□ 1.16
SYVN1-210ENST00000528487 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
SYVN1-210ENST00000528487 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
SYVN1-210ENST00000528487 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
SYVN1-210ENST00000528487 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
SYVN1-210ENST00000528487 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
SYVN1-210ENST00000528487 MAP3K4Q9Y6R4 1608 aa22.18■■□□□ 1.14
SYVN1-210ENST00000528487 CD109Q6YHK3 1445 aa22.18■■□□□ 1.14
SYVN1-210ENST00000528487 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
SYVN1-210ENST00000528487 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.14
SYVN1-210ENST00000528487 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.14
SYVN1-210ENST00000528487 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
SYVN1-210ENST00000528487 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
SYVN1-210ENST00000528487 PPRC1Q5VV67 1664 aaKnown RBP22.11■■□□□ 1.13
SYVN1-210ENST00000528487 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
SYVN1-210ENST00000528487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
SYVN1-210ENST00000528487 MTUS2Q5JR59 1369 aa22.05■■□□□ 1.12
SYVN1-210ENST00000528487 KIF14Q15058 1648 aa22.05■■□□□ 1.12
SYVN1-210ENST00000528487 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
SYVN1-210ENST00000528487 TIAM1Q13009 1591 aa22■■□□□ 1.11
SYVN1-210ENST00000528487 PLCH2O75038 1416 aa21.99■■□□□ 1.11
SYVN1-210ENST00000528487 APLP2Q06481 763 aa21.99■■□□□ 1.11
SYVN1-210ENST00000528487 MAP3K1Q13233 1512 aa21.99■■□□□ 1.11
SYVN1-210ENST00000528487 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
SYVN1-210ENST00000528487 NEO1Q92859 1461 aa21.97■■□□□ 1.11
SYVN1-210ENST00000528487 KDM6BO15054 1643 aa21.97■■□□□ 1.11
SYVN1-210ENST00000528487 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
SYVN1-210ENST00000528487 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
SYVN1-210ENST00000528487 FANCAO15360 1455 aa21.95■■□□□ 1.1
SYVN1-210ENST00000528487 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
SYVN1-210ENST00000528487 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
SYVN1-210ENST00000528487 LRRC9Q6ZRR7 1453 aa21.94■■□□□ 1.1
SYVN1-210ENST00000528487 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
SYVN1-210ENST00000528487 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
SYVN1-210ENST00000528487 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
SYVN1-210ENST00000528487 CCNB3Q8WWL7 1395 aa21.89■■□□□ 1.1
SYVN1-210ENST00000528487 CFAP74Q9C0B2 1584 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms