RNA–Protein interactions for RNA: ENST00000528487.1

SYVN1-210, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-210ENST00000528487 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
SYVN1-210ENST00000528487 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
SYVN1-210ENST00000528487 ABCC9O60706 1549 aa28.99■■■□□ 2.23
SYVN1-210ENST00000528487 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
SYVN1-210ENST00000528487 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
SYVN1-210ENST00000528487 NACADO15069 1562 aa27.96■■■□□ 2.07
SYVN1-210ENST00000528487 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
SYVN1-210ENST00000528487 MYO15BQ96JP2 1530 aa27.85■■■□□ 2.05
SYVN1-210ENST00000528487 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
SYVN1-210ENST00000528487 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
SYVN1-210ENST00000528487 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
SYVN1-210ENST00000528487 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
SYVN1-210ENST00000528487 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
SYVN1-210ENST00000528487 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
SYVN1-210ENST00000528487 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
SYVN1-210ENST00000528487 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
SYVN1-210ENST00000528487 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
SYVN1-210ENST00000528487 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
SYVN1-210ENST00000528487 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
SYVN1-210ENST00000528487 SMARCA4P51532 1647 aa26■■□□□ 1.75
SYVN1-210ENST00000528487 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
SYVN1-210ENST00000528487 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
SYVN1-210ENST00000528487 NCAPD3P42695 1498 aa25.83■■□□□ 1.73
SYVN1-210ENST00000528487 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
SYVN1-210ENST00000528487 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
SYVN1-210ENST00000528487 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
SYVN1-210ENST00000528487 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
SYVN1-210ENST00000528487 BAZ1BQ9UIG0 1483 aaKnown RBP25.64■■□□□ 1.69
SYVN1-210ENST00000528487 WIZO95785 1651 aa25.6■■□□□ 1.69
SYVN1-210ENST00000528487 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
SYVN1-210ENST00000528487 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
SYVN1-210ENST00000528487 NESP48681 1621 aa25.14■■□□□ 1.61
SYVN1-210ENST00000528487 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
SYVN1-210ENST00000528487 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
SYVN1-210ENST00000528487 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
SYVN1-210ENST00000528487 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
SYVN1-210ENST00000528487 CFTRP13569 1480 aa24.96■■□□□ 1.59
SYVN1-210ENST00000528487 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.59
SYVN1-210ENST00000528487 KIF21AQ7Z4S6 1674 aa24.79■■□□□ 1.56
SYVN1-210ENST00000528487 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
SYVN1-210ENST00000528487 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
SYVN1-210ENST00000528487 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
SYVN1-210ENST00000528487 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
SYVN1-210ENST00000528487 CUX2O14529 1486 aa24.65■■□□□ 1.54
SYVN1-210ENST00000528487 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
SYVN1-210ENST00000528487 WDR62O43379 1518 aa24.56■■□□□ 1.52
SYVN1-210ENST00000528487 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
SYVN1-210ENST00000528487 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
SYVN1-210ENST00000528487 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
SYVN1-210ENST00000528487 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SYVN1-210ENST00000528487 CUX1P39880 1505 aa24.27■■□□□ 1.48
SYVN1-210ENST00000528487 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
SYVN1-210ENST00000528487 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
SYVN1-210ENST00000528487 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
SYVN1-210ENST00000528487 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
SYVN1-210ENST00000528487 SOGA1O94964 1423 aa24.14■■□□□ 1.45
SYVN1-210ENST00000528487 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
SYVN1-210ENST00000528487 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
SYVN1-210ENST00000528487 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
SYVN1-210ENST00000528487 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
SYVN1-210ENST00000528487 ZNF608Q9ULD9 1512 aaPredicted RBP24.09■■□□□ 1.45
SYVN1-210ENST00000528487 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
SYVN1-210ENST00000528487 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.432e-9■■■■□ 22.2
SYVN1-210ENST00000528487 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
SYVN1-210ENST00000528487 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.43
SYVN1-210ENST00000528487 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
SYVN1-210ENST00000528487 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
SYVN1-210ENST00000528487 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
SYVN1-210ENST00000528487 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
SYVN1-210ENST00000528487 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
SYVN1-210ENST00000528487 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
SYVN1-210ENST00000528487 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
SYVN1-210ENST00000528487 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SYVN1-210ENST00000528487 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
SYVN1-210ENST00000528487 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
SYVN1-210ENST00000528487 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
SYVN1-210ENST00000528487 FBLN2P98095 1184 aa23.71■■□□□ 1.39
SYVN1-210ENST00000528487 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
SYVN1-210ENST00000528487 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
SYVN1-210ENST00000528487 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
SYVN1-210ENST00000528487 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
SYVN1-210ENST00000528487 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
SYVN1-210ENST00000528487 CHD1O14646 1710 aa23.61■■□□□ 1.37
SYVN1-210ENST00000528487 IGF1RP08069 1367 aa23.6■■□□□ 1.37
SYVN1-210ENST00000528487 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
SYVN1-210ENST00000528487 ADAMTS12P58397 1594 aa23.56■■□□□ 1.36
SYVN1-210ENST00000528487 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
SYVN1-210ENST00000528487 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
SYVN1-210ENST00000528487 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
SYVN1-210ENST00000528487 CUL7Q14999 1698 aa23.44■■□□□ 1.34
SYVN1-210ENST00000528487 NUP160Q12769 1436 aa23.39■■□□□ 1.33
SYVN1-210ENST00000528487 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
SYVN1-210ENST00000528487 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
SYVN1-210ENST00000528487 EEA1Q15075 1411 aa23.33■■□□□ 1.33
SYVN1-210ENST00000528487 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
SYVN1-210ENST00000528487 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
SYVN1-210ENST00000528487 FAM9AQ8IZU1 332 aaPredicted RBP23.29■■□□□ 1.32
SYVN1-210ENST00000528487 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
SYVN1-210ENST00000528487 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
SYVN1-210ENST00000528487 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms