RNA–Protein interactions for RNA: ENST00000528225.5

ARHGEF12-206, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,647 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-206ENST00000528225 SETD5Q9C0A6 1442 aa11.67□□□□□ -0.54
ARHGEF12-206ENST00000528225 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF12-206ENST00000528225 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
ARHGEF12-206ENST00000528225 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
ARHGEF12-206ENST00000528225 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.55
ARHGEF12-206ENST00000528225 HIRIP3Q9BW71 556 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF12-206ENST00000528225 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
ARHGEF12-206ENST00000528225 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
ARHGEF12-206ENST00000528225 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
ARHGEF12-206ENST00000528225 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
ARHGEF12-206ENST00000528225 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
ARHGEF12-206ENST00000528225 FAM50AQ14320 339 aaKnown RBP11.57□□□□□ -0.56
ARHGEF12-206ENST00000528225 IRX6P78412 446 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF12-206ENST00000528225 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
ARHGEF12-206ENST00000528225 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
ARHGEF12-206ENST00000528225 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
ARHGEF12-206ENST00000528225 ERICH6BQ5W0A0 696 aa11.55□□□□□ -0.56
ARHGEF12-206ENST00000528225 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
ARHGEF12-206ENST00000528225 LRRC9Q6ZRR7 1453 aa11.53□□□□□ -0.56
ARHGEF12-206ENST00000528225 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
ARHGEF12-206ENST00000528225 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
ARHGEF12-206ENST00000528225 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
ARHGEF12-206ENST00000528225 CUX1P39880 1505 aa11.5□□□□□ -0.57
ARHGEF12-206ENST00000528225 ATP1B4Q9UN42 357 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF12-206ENST00000528225 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
ARHGEF12-206ENST00000528225 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
ARHGEF12-206ENST00000528225 NOP58Q9Y2X3 529 aaKnown RBP11.43□□□□□ -0.58
ARHGEF12-206ENST00000528225 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
ARHGEF12-206ENST00000528225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.42□□□□□ -0.58
ARHGEF12-206ENST00000528225 IGF1RP08069 1367 aa11.42□□□□□ -0.58
ARHGEF12-206ENST00000528225 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF12-206ENST00000528225 NBR1Q14596 966 aa11.4□□□□□ -0.58
ARHGEF12-206ENST00000528225 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
ARHGEF12-206ENST00000528225 CCDC18Q5T9S5 1454 aa11.39□□□□□ -0.59
ARHGEF12-206ENST00000528225 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
ARHGEF12-206ENST00000528225 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
ARHGEF12-206ENST00000528225 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
ARHGEF12-206ENST00000528225 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
ARHGEF12-206ENST00000528225 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
ARHGEF12-206ENST00000528225 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
ARHGEF12-206ENST00000528225 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF12-206ENST00000528225 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
ARHGEF12-206ENST00000528225 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
ARHGEF12-206ENST00000528225 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
ARHGEF12-206ENST00000528225 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
ARHGEF12-206ENST00000528225 FGD6Q6ZV73 1430 aa11.34□□□□□ -0.59
ARHGEF12-206ENST00000528225 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
ARHGEF12-206ENST00000528225 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
ARHGEF12-206ENST00000528225 CFTRP13569 1480 aa11.33□□□□□ -0.6
ARHGEF12-206ENST00000528225 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
ARHGEF12-206ENST00000528225 KDM5BQ9UGL1 1544 aa11.33□□□□□ -0.6
ARHGEF12-206ENST00000528225 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF12-206ENST00000528225 PRKRIP1Q9H875 184 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF12-206ENST00000528225 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
ARHGEF12-206ENST00000528225 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
ARHGEF12-206ENST00000528225 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
ARHGEF12-206ENST00000528225 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
ARHGEF12-206ENST00000528225 FHOD3Q2V2M9 1422 aa11.31□□□□□ -0.6
ARHGEF12-206ENST00000528225 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
ARHGEF12-206ENST00000528225 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF12-206ENST00000528225 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
ARHGEF12-206ENST00000528225 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
ARHGEF12-206ENST00000528225 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
ARHGEF12-206ENST00000528225 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
ARHGEF12-206ENST00000528225 NAIPQ13075 1403 aa11.29□□□□□ -0.6
ARHGEF12-206ENST00000528225 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■□□□ 13.2
ARHGEF12-206ENST00000528225 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF12-206ENST00000528225 CCDC136Q96JN2 1154 aa11.28□□□□□ -0.6
ARHGEF12-206ENST00000528225 FMN1Q68DA7 1419 aa11.28□□□□□ -0.6
ARHGEF12-206ENST00000528225 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF12-206ENST00000528225 CCDC7Q96M83 1385 aa11.27□□□□□ -0.6
ARHGEF12-206ENST00000528225 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.61
ARHGEF12-206ENST00000528225 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
ARHGEF12-206ENST00000528225 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
ARHGEF12-206ENST00000528225 NCOA1Q15788 1441 aa11.25□□□□□ -0.61
ARHGEF12-206ENST00000528225 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
ARHGEF12-206ENST00000528225 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
ARHGEF12-206ENST00000528225 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
ARHGEF12-206ENST00000528225 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
ARHGEF12-206ENST00000528225 RRP7BPQ9NSQ0 103 aa11.22□□□□□ -0.61
ARHGEF12-206ENST00000528225 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
ARHGEF12-206ENST00000528225 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
ARHGEF12-206ENST00000528225 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF12-206ENST00000528225 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
ARHGEF12-206ENST00000528225 HECW1Q76N89 1606 aa11.2□□□□□ -0.62
ARHGEF12-206ENST00000528225 CHIC2Q9UKJ5 165 aa11.2□□□□□ -0.62
ARHGEF12-206ENST00000528225 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
ARHGEF12-206ENST00000528225 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
ARHGEF12-206ENST00000528225 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF12-206ENST00000528225 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
ARHGEF12-206ENST00000528225 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
ARHGEF12-206ENST00000528225 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF12-206ENST00000528225 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
ARHGEF12-206ENST00000528225 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
ARHGEF12-206ENST00000528225 LRRIQ1Q96JM4 1722 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms