RNA–Protein interactions for RNA: ENST00000528225.5

ARHGEF12-206, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,647 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-206ENST00000528225 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
ARHGEF12-206ENST00000528225 HRCP23327 699 aa14.01□□□□□ -0.17
ARHGEF12-206ENST00000528225 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
ARHGEF12-206ENST00000528225 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
ARHGEF12-206ENST00000528225 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
ARHGEF12-206ENST00000528225 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
ARHGEF12-206ENST00000528225 CHIC1Q5VXU3 224 aa13.69□□□□□ -0.22
ARHGEF12-206ENST00000528225 PPARGC1BQ86YN6 1023 aaKnown RBP13.67□□□□□ -0.22
ARHGEF12-206ENST00000528225 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
ARHGEF12-206ENST00000528225 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
ARHGEF12-206ENST00000528225 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
ARHGEF12-206ENST00000528225 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF12-206ENST00000528225 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
ARHGEF12-206ENST00000528225 CCDC180Q9P1Z9 1646 aa13.3□□□□□ -0.28
ARHGEF12-206ENST00000528225 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF12-206ENST00000528225 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
ARHGEF12-206ENST00000528225 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
ARHGEF12-206ENST00000528225 MYT1Q01538 1121 aa12.94□□□□□ -0.34
ARHGEF12-206ENST00000528225 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
ARHGEF12-206ENST00000528225 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
ARHGEF12-206ENST00000528225 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
ARHGEF12-206ENST00000528225 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF12-206ENST00000528225 ABCC9O60706 1549 aa12.82□□□□□ -0.36
ARHGEF12-206ENST00000528225 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF12-206ENST00000528225 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
ARHGEF12-206ENST00000528225 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.36
ARHGEF12-206ENST00000528225 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF12-206ENST00000528225 RSF1Q96T23 1441 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF12-206ENST00000528225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF12-206ENST00000528225 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
ARHGEF12-206ENST00000528225 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
ARHGEF12-206ENST00000528225 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
ARHGEF12-206ENST00000528225 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF12-206ENST00000528225 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
ARHGEF12-206ENST00000528225 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF12-206ENST00000528225 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
ARHGEF12-206ENST00000528225 MIER1Q8N108 512 aa12.41□□□□□ -0.42
ARHGEF12-206ENST00000528225 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
ARHGEF12-206ENST00000528225 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
ARHGEF12-206ENST00000528225 WIZO95785 1651 aa12.37□□□□□ -0.43
ARHGEF12-206ENST00000528225 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
ARHGEF12-206ENST00000528225 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
ARHGEF12-206ENST00000528225 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
ARHGEF12-206ENST00000528225 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF12-206ENST00000528225 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
ARHGEF12-206ENST00000528225 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
ARHGEF12-206ENST00000528225 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
ARHGEF12-206ENST00000528225 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
ARHGEF12-206ENST00000528225 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
ARHGEF12-206ENST00000528225 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
ARHGEF12-206ENST00000528225 SOGA1O94964 1423 aa12.23□□□□□ -0.45
ARHGEF12-206ENST00000528225 EEA1Q15075 1411 aa12.21□□□□□ -0.46
ARHGEF12-206ENST00000528225 NACADO15069 1562 aa12.2□□□□□ -0.46
ARHGEF12-206ENST00000528225 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
ARHGEF12-206ENST00000528225 GOLGA3Q08378 1498 aa12.16□□□□□ -0.46
ARHGEF12-206ENST00000528225 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
ARHGEF12-206ENST00000528225 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
ARHGEF12-206ENST00000528225 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
ARHGEF12-206ENST00000528225 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
ARHGEF12-206ENST00000528225 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
ARHGEF12-206ENST00000528225 APLP2Q06481 763 aa12.09□□□□□ -0.47
ARHGEF12-206ENST00000528225 CLIP1P30622 1438 aa12.05□□□□□ -0.48
ARHGEF12-206ENST00000528225 VPS8Q8N3P4 1428 aa12.04□□□□□ -0.48
ARHGEF12-206ENST00000528225 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
ARHGEF12-206ENST00000528225 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
ARHGEF12-206ENST00000528225 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
ARHGEF12-206ENST00000528225 KIF21BO75037 1637 aa12.01□□□□□ -0.49
ARHGEF12-206ENST00000528225 DHX57Q6P158 1386 aaKnown RBP12□□□□□ -0.49
ARHGEF12-206ENST00000528225 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
ARHGEF12-206ENST00000528225 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF12-206ENST00000528225 BCANQ96GW7 911 aa11.93□□□□□ -0.5
ARHGEF12-206ENST00000528225 FKBP8Q14318 412 aa11.9□□□□□ -0.5
ARHGEF12-206ENST00000528225 KCNH8Q96L42 1107 aa11.9□□□□□ -0.5
ARHGEF12-206ENST00000528225 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
ARHGEF12-206ENST00000528225 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
ARHGEF12-206ENST00000528225 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
ARHGEF12-206ENST00000528225 NEFLP07196 543 aa11.84□□□□□ -0.51
ARHGEF12-206ENST00000528225 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF12-206ENST00000528225 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
ARHGEF12-206ENST00000528225 CUX2O14529 1486 aa11.8□□□□□ -0.52
ARHGEF12-206ENST00000528225 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
ARHGEF12-206ENST00000528225 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
ARHGEF12-206ENST00000528225 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
ARHGEF12-206ENST00000528225 ITGAEP38570 1179 aa11.77□□□□□ -0.53
ARHGEF12-206ENST00000528225 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
ARHGEF12-206ENST00000528225 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
ARHGEF12-206ENST00000528225 RAB3GAP2Q9H2M9 1393 aa11.73□□□□□ -0.53
ARHGEF12-206ENST00000528225 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
ARHGEF12-206ENST00000528225 MSH5O43196 834 aa11.73□□□□□ -0.53
ARHGEF12-206ENST00000528225 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
ARHGEF12-206ENST00000528225 PPP1R15AO75807 674 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF12-206ENST00000528225 TRIM52Q96A61 297 aa11.72□□□□□ -0.53
ARHGEF12-206ENST00000528225 MAPKBP1O60336 1514 aa11.72□□□□□ -0.53
ARHGEF12-206ENST00000528225 ANP32CO43423 234 aa11.71□□□□□ -0.54
ARHGEF12-206ENST00000528225 PRXQ9BXM0 1461 aa11.71□□□□□ -0.54
ARHGEF12-206ENST00000528225 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
ARHGEF12-206ENST00000528225 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
ARHGEF12-206ENST00000528225 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
ARHGEF12-206ENST00000528225 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
ARHGEF12-206ENST00000528225 FANCIQ9NVI1 1328 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms