RNA–Protein interactions for RNA: ENST00000527148.5

SLC39A4-204, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2

Gene SLC39A4, Length 684 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-204ENST00000527148 RAPGEF2Q9Y4G8 1499 aa35.35■■■■□ 3.25
SLC39A4-204ENST00000527148 ERCC6L2Q5T890 1561 aa35.34■■■■□ 3.25
SLC39A4-204ENST00000527148 JPH4Q96JJ6 628 aa35.26■■■■□ 3.24
SLC39A4-204ENST00000527148 PRG4Q92954 1404 aaPredicted RBP35.25■■■■□ 3.23
SLC39A4-204ENST00000527148 PRXQ9BXM0 1461 aa35.23■■■■□ 3.23
SLC39A4-204ENST00000527148 EEA1Q15075 1411 aa35.23■■■■□ 3.23
SLC39A4-204ENST00000527148 CHIC1Q5VXU3 224 aa35.21■■■■□ 3.23
SLC39A4-204ENST00000527148 IQGAP2Q13576 1575 aa35.19■■■■□ 3.22
SLC39A4-204ENST00000527148 CTTNBP2Q8WZ74 1663 aa35.09■■■■□ 3.21
SLC39A4-204ENST00000527148 CSRNP3Q8WYN3 585 aa35.08■■■■□ 3.21
SLC39A4-204ENST00000527148 UGGT2Q9NYU1 1516 aa35.01■■■■□ 3.19
SLC39A4-204ENST00000527148 CARMIL2Q6F5E8 1435 aa34.98■■■■□ 3.19
SLC39A4-204ENST00000527148 DISP1Q96F81 1524 aa34.92■■■■□ 3.18
SLC39A4-204ENST00000527148 KIF21BO75037 1637 aa34.89■■■■□ 3.18
SLC39A4-204ENST00000527148 KIAA0556O60303 1618 aa34.86■■■■□ 3.17
SLC39A4-204ENST00000527148 TNIKQ9UKE5 1360 aa34.86■■■■□ 3.17
SLC39A4-204ENST00000527148 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
SLC39A4-204ENST00000527148 PTPRGP23470 1445 aa34.81■■■■□ 3.16
SLC39A4-204ENST00000527148 ADCY10Q96PN6 1610 aa34.78■■■■□ 3.16
SLC39A4-204ENST00000527148 GOLGA3Q08378 1498 aa34.78■■■■□ 3.16
SLC39A4-204ENST00000527148 UHRF1BP1LA0JNW5 1464 aa34.64■■■■□ 3.14
SLC39A4-204ENST00000527148 SAMD9Q5K651 1589 aa34.63■■■■□ 3.13
SLC39A4-204ENST00000527148 TRHP20396 242 aaPredicted RBP34.63■■■■□ 3.13
SLC39A4-204ENST00000527148 MAPKBP1O60336 1514 aa34.62■■■■□ 3.13
SLC39A4-204ENST00000527148 UACAQ9BZF9 1416 aa34.61■■■■□ 3.13
SLC39A4-204ENST00000527148 ABCC2Q92887 1545 aa34.6■■■■□ 3.13
SLC39A4-204ENST00000527148 TTBK1Q5TCY1 1321 aaPredicted RBP34.59■■■■□ 3.13
SLC39A4-204ENST00000527148 NPM1P06748 294 aaKnown RBP eCLIP34.57■■■■□ 3.12
SLC39A4-204ENST00000527148 ABCA8O94911 1581 aa34.49■■■■□ 3.11
SLC39A4-204ENST00000527148 EFCAB5A4FU69 1503 aa34.47■■■■□ 3.11
SLC39A4-204ENST00000527148 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
SLC39A4-204ENST00000527148 KDM5BQ9UGL1 1544 aa34.46■■■■□ 3.11
SLC39A4-204ENST00000527148 KIF13AQ9H1H9 1805 aa34.45■■■■□ 3.11
SLC39A4-204ENST00000527148 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
SLC39A4-204ENST00000527148 DIP2BQ9P265 1576 aa34.4■■■■□ 3.1
SLC39A4-204ENST00000527148 UBTFP17480 764 aaKnown RBP34.4■■■■□ 3.1
SLC39A4-204ENST00000527148 ZCCHC11Q5TAX3 1644 aaKnown RBP34.4■■■■□ 3.1
SLC39A4-204ENST00000527148 P3H3Q8IVL6 736 aa34.36■■■■□ 3.09
SLC39A4-204ENST00000527148 EHMT2Q96KQ7 1210 aa34.33■■■■□ 3.09
SLC39A4-204ENST00000527148 FHOD3Q2V2M9 1422 aa34.32■■■■□ 3.08
SLC39A4-204ENST00000527148 ASXL2Q76L83 1435 aa34.32■■■■□ 3.08
SLC39A4-204ENST00000527148 RANGAP1P46060 587 aaPredicted RBP34.29■■■■□ 3.08
SLC39A4-204ENST00000527148 RAPGEF6Q8TEU7 1601 aa34.28■■■■□ 3.08
SLC39A4-204ENST00000527148 FAM69CQ0P6D2 419 aa34.23■■■■□ 3.07
SLC39A4-204ENST00000527148 ARHGAP35Q9NRY4 1499 aa34.22■■■■□ 3.07
SLC39A4-204ENST00000527148 GLI2P10070 1586 aa34.21■■■■□ 3.07
SLC39A4-204ENST00000527148 WDR7Q9Y4E6 1490 aa34.18■■■■□ 3.06
SLC39A4-204ENST00000527148 EPRSP07814 1512 aaKnown RBP34.14■■■■□ 3.06
SLC39A4-204ENST00000527148 ATP10BO94823 1461 aa34.14■■■■□ 3.06
SLC39A4-204ENST00000527148 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
SLC39A4-204ENST00000527148 FMN1Q68DA7 1419 aa34.09■■■■□ 3.05
SLC39A4-204ENST00000527148 MAP3K4Q9Y6R4 1608 aa34.04■■■■□ 3.04
SLC39A4-204ENST00000527148 TSPOAP1O95153 1857 aa34.02■■■■□ 3.04
SLC39A4-204ENST00000527148 PPRC1Q5VV67 1664 aaKnown RBP33.99■■■■□ 3.03
SLC39A4-204ENST00000527148 HECW1Q76N89 1606 aa33.98■■■■□ 3.03
SLC39A4-204ENST00000527148 ARID3CA6NKF2 412 aa33.98■■■■□ 3.03
SLC39A4-204ENST00000527148 CLIP1P30622 1438 aa33.96■■■■□ 3.03
SLC39A4-204ENST00000527148 CFAP43Q8NDM7 1665 aa33.96■■■■□ 3.03
SLC39A4-204ENST00000527148 CDK13Q14004 1512 aaKnown RBP33.87■■■■□ 3.01
SLC39A4-204ENST00000527148 TEX14Q8IWB6 1497 aa33.87■■■■□ 3.01
SLC39A4-204ENST00000527148 ABCA9Q8IUA7 1624 aa33.86■■■■□ 3.01
SLC39A4-204ENST00000527148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.86■■■■□ 3.01
SLC39A4-204ENST00000527148 HNRNPUL2Q1KMD3 747 aaKnown RBP33.86■■■■□ 3.01
SLC39A4-204ENST00000527148 KCNH8Q96L42 1107 aa33.85■■■■□ 3.01
SLC39A4-204ENST00000527148 PCF11O94913 1555 aaKnown RBP33.85■■■■□ 3.01
SLC39A4-204ENST00000527148 KDM6BO15054 1643 aa33.84■■■■□ 3.01
SLC39A4-204ENST00000527148 MAGI3Q5TCQ9 1506 aa33.83■■■■□ 3.01
SLC39A4-204ENST00000527148 CD109Q6YHK3 1445 aa33.81■■■■□ 3
SLC39A4-204ENST00000527148 CASKIN1Q8WXD9 1431 aa33.81■■■■□ 3
SLC39A4-204ENST00000527148 CEP162Q5TB80 1403 aa33.8■■■■□ 3
SLC39A4-204ENST00000527148 LRRIQ1Q96JM4 1722 aa33.79■■■■□ 3
SLC39A4-204ENST00000527148 PLEKHD1A6NEE1 506 aa33.77■■■■□ 3
SLC39A4-204ENST00000527148 FYCO1Q9BQS8 1478 aa33.76■■■■□ 3
SLC39A4-204ENST00000527148 CCDC18Q5T9S5 1454 aa33.72■■■□□ 2.99
SLC39A4-204ENST00000527148 ATP1B4Q9UN42 357 aaPredicted RBP33.72■■■□□ 2.99
SLC39A4-204ENST00000527148 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
SLC39A4-204ENST00000527148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.66■■■□□ 2.984e-8■■■■■ 66.4
SLC39A4-204ENST00000527148 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
SLC39A4-204ENST00000527148 TTC37Q6PGP7 1564 aa33.62■■■□□ 2.97
SLC39A4-204ENST00000527148 COL17A1Q9UMD9 1497 aaPredicted RBP33.62■■■□□ 2.97
SLC39A4-204ENST00000527148 TROQ12816 1431 aaPredicted RBP33.62■■■□□ 2.97
SLC39A4-204ENST00000527148 KIF14Q15058 1648 aa33.58■■■□□ 2.97
SLC39A4-204ENST00000527148 NEO1Q92859 1461 aa33.56■■■□□ 2.96
SLC39A4-204ENST00000527148 PHLDB1Q86UU1 1377 aa33.55■■■□□ 2.96
SLC39A4-204ENST00000527148 ARAP3Q8WWN8 1544 aa33.53■■■□□ 2.96
SLC39A4-204ENST00000527148 CFAP74Q9C0B2 1584 aa33.51■■■□□ 2.96
SLC39A4-204ENST00000527148 MYO5CQ9NQX4 1742 aa33.48■■■□□ 2.95
SLC39A4-204ENST00000527148 FANCAO15360 1455 aa33.45■■■□□ 2.95
SLC39A4-204ENST00000527148 PLCH2O75038 1416 aa33.44■■■□□ 2.94
SLC39A4-204ENST00000527148 VPS8Q8N3P4 1428 aa33.44■■■□□ 2.94
SLC39A4-204ENST00000527148 AKNAQ7Z591 1439 aa33.36■■■□□ 2.93
SLC39A4-204ENST00000527148 FRMPD1Q5SYB0 1578 aa33.34■■■□□ 2.93
SLC39A4-204ENST00000527148 PREX2Q70Z35 1606 aa33.33■■■□□ 2.93
SLC39A4-204ENST00000527148 EHBP1L1Q8N3D4 1523 aa33.32■■■□□ 2.92
SLC39A4-204ENST00000527148 RICTORQ6R327 1708 aa33.3■■■□□ 2.92
SLC39A4-204ENST00000527148 CDC42BPBQ9Y5S2 1711 aa33.29■■■□□ 2.92
SLC39A4-204ENST00000527148 ARHGAP5Q13017 1502 aa33.28■■■□□ 2.92
SLC39A4-204ENST00000527148 MTUS2Q5JR59 1369 aa33.28■■■□□ 2.92
SLC39A4-204ENST00000527148 DENND4BO75064 1496 aaPredicted RBP33.28■■■□□ 2.92
SLC39A4-204ENST00000527148 TIAM1Q13009 1591 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms